BS12586.complete Sequence
503 bp assembled on 2007-10-17
GenBank Submission: FJ637222
> BS12586.complete
GAAGTTATCAGTCGACATGACTAATTATTCGGAAATTTTTAAGAAAGTTT
TTAACGATATTGGCCAACGTTCAGCATATTCGCAGATGCTTATTGGCGTT
TCATCAGGATGGGTCACAGGATATACGACAATGAAAATAGGCAAATTTGC
TGCCTTTGCAGTTGGCGGCAGCATAATCTTGCTCGAAATCGCCCACCAAG
AAGGACTTATAAAAATAAATTGGTCTAAGTTGGATAAGAGCGTGGATAAG
CTCGCCGATAAAGTGGAAGCCTCGCTGGGTCGTGAGAAGAACTGGAAGGA
TAAGACCGAAAGATATGTCGACAATCAATTAGACAGAGCTGAAAGCCTCC
TAACCCGAAACGGCAAGAAAGTGGCGAAATGGTACACCAAACTGATTGGC
GATGAAGAGGGTCCAAAAGTCAACGATCTGCACATATTTTTGGCATCATT
TTTCGGTGGCGTTGCCCTGGGCATTGCTACTGGATAAAAGCTTTCTAGAC
CAT
BS12586.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5676-RA | 471 | CG5676-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:46:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5676-RA | 769 | CG5676-RA | 77..550 | 17..490 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:46:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10255078..10255271 | 304..111 | 970 | 100 | Minus |
2L | 23513712 | 2L | 10254829..10255016 | 490..303 | 940 | 100 | Minus |
2L | 23513712 | 2L | 10255720..10255815 | 112..17 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:46:19 has no hits.
BS12586.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:15:12 Download gff for
BS12586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5676-RA | 1..471 | 17..487 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:46:07 Download gff for
BS12586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5676-RA | 70..547 | 17..494 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:55 Download gff for
BS12586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5676-RA | 77..545 | 17..485 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:31:43 Download gff for
BS12586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5676-RA | 70..538 | 17..485 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:02 Download gff for
BS12586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5676-RA | 77..545 | 17..485 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:02 Download gff for
BS12586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10254834..10255014 | 305..485 | 100 | <- | Minus |
2L | 10255078..10255270 | 112..304 | 100 | <- | Minus |
2L | 10255721..10255815 | 17..111 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:55 Download gff for
BS12586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10254834..10255014 | 305..485 | 100 | <- | Minus |
arm_2L | 10255078..10255270 | 112..304 | 100 | <- | Minus |
arm_2L | 10255721..10255815 | 17..111 | 100 | | Minus |
BS12586.pep Sequence
Translation from 16 to 486
> BS12586.pep
MTNYSEIFKKVFNDIGQRSAYSQMLIGVSSGWVTGYTTMKIGKFAAFAVG
GSIILLEIAHQEGLIKINWSKLDKSVDKLADKVEASLGREKNWKDKTERY
VDNQLDRAESLLTRNGKKVAKWYTKLIGDEEGPKVNDLHIFLASFFGGVA
LGIATG*
BS12586.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:31:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5676-PA | 156 | CG5676-PA | 1..156 | 1..156 | 802 | 100 | Plus |
CG12511-PB | 131 | CG12511-PB | 6..67 | 7..68 | 139 | 40.3 | Plus |