Clone Sequence Records
BS12625.3prime Sequence
363 bp (363 high quality bases) assembled on 2006-10-13
> BS12625.3prime
ATGGTCTAGAAAGCTTTCAATTGAGTTCTTCTTCCTTCCCAAAGGATCCT
TCGTCCTTATCAGCCCCCTCGAGTTCCCGCTTGATCGGATTACCGATTCG
TACATTGATGATCCTTTGCTTGTCCTTGCGGCTATGTCCCTTTAATGACT
TAACAGTGAAGCCGAGGACAACGCAAGCCACAGTGGCCACGCCCACGCAC
ATCAGAGCCTTGTGGGCGGGGCGCAGATTGCCCAGATTATTGCCCAAGTT
CTCCAGGCTGCCCAATCGTCCCAATCCTTTGGGCGCAACTTTAGGCAGAA
GTGCCAGCTGATCCGTCAAGTTGGACAGAAACTTTGAGTAGTCCGACATG
TCGACTGATAACT
BS12625.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:28:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-PA | 333 | CG13021-RA | 1..333 | 349..17 | 1665 | 100 | Minus |
CG13021-PB | 333 | CG13021-RB | 1..333 | 349..17 | 1665 | 100 | Minus |
CG13021-PC | 333 | CG13021-RC | 1..333 | 349..17 | 1665 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:54:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-RB | 611 | CG13021-RB | 114..446 | 349..17 | 1665 | 100 | Minus |
CG13021-RA | 597 | CG13021-RA | 100..432 | 349..17 | 1665 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:54:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3515260..3515592 | 349..17 | 1665 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 03:54:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 2659..2709 | 346..298 | 105 | 72.5 | Minus |
BS12625.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:31:38 Download gff for
BS12625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-PC | 1..333 | 17..349 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:31:59 Download gff for
BS12625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 93..432 | 17..355 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:49:50 Download gff for
BS12625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 93..432 | 17..355 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:49:50 Download gff for
BS12625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3515253..3515592 | 17..355 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:31:59 Download gff for
BS12625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3409286..3409625 | 17..355 | 99 | | Minus |
BS12625.5prime Sequence
363 bp (363 high quality bases) assembled on 2006-10-13
> BS12625.5prime
GAAGTTATCAGTCGACATGTCGGACTACTCAAAGTTTCTGTCCAACTTGA
CGGATCAGCTGGCACTTCTGCCTAAAGTTGCGCCCAAAGGATTGGGACGA
TTGGGCAGCCTGGAGAACTTGGGCAATAATCTGGGCAATCTGCGCCCCGC
CCACAAGGCTCTGATGTGCGTGGGCGTGGCCACTGTGGCTTGCGTTGTCC
TCGGCTTCACTGTTAAGTCATTAAAGGGACATAGCCGCAAGGACAAGCAA
AGGATCATCAATGTACGAATCGGTAATCCGATCAAGCGGGAACTCGAGGG
GGCTGATAAGGACGAAGGATCCTTTGGGAAGGAAGAAGAACTCAATTGAA
AGCTTTCTAGACC
BS12625.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:28:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-PA | 333 | CG13021-RA | 1..333 | 17..349 | 1665 | 100 | Plus |
CG13021-PB | 333 | CG13021-RB | 1..333 | 17..349 | 1665 | 100 | Plus |
CG13021-PC | 333 | CG13021-RC | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:41:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-RB | 611 | CG13021-RB | 114..446 | 17..349 | 1665 | 100 | Plus |
CG13021-RA | 597 | CG13021-RA | 100..432 | 17..349 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:41:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3515260..3515592 | 17..349 | 1665 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 17:41:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 2659..2709 | 20..68 | 105 | 72.5 | Plus |
BS12625.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:31:39 Download gff for
BS12625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-PC | 1..333 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:42:14 Download gff for
BS12625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 93..432 | 11..349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:59:15 Download gff for
BS12625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 93..432 | 11..349 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:59:15 Download gff for
BS12625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3515253..3515592 | 11..349 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:42:14 Download gff for
BS12625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3409286..3409625 | 11..349 | 99 | | Plus |
BS12625.complete Sequence
365 bp assembled on 2006-11-01
> BS12625.complete
GAAGTTATCAGTCGACATGTCGGACTACTCAAAGTTTCTGTCCAACTTGA
CGGATCAGCTGGCACTTCTGCCTAAAGTTGCGCCCAAAGGATTGGGACGA
TTGGGCAGCCTGGAGAACTTGGGCAATAATCTGGGCAATCTGCGCCCCGC
CCACAAGGCTCTGATGTGCGTGGGCGTGGCCACTGTGGCTTGCGTTGTCC
TCGGCTTCACTGTTAAGTCATTAAAGGGACATAGCCGCAAGGACAAGCAA
AGGATCATCAATGTACGAATCGGTAATCCGATCAAGCGGGAACTCGAGGG
GGCTGATAAGGACGAAGGATCCTTTGGGAAGGAAGAAGAACTCAATTGAA
AGCTTTCTAGACCAT
BS12625.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-RB | 333 | CG13021-PB | 1..333 | 17..349 | 1665 | 100 | Plus |
CG13021-RA | 333 | CG13021-PA | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-RB | 611 | CG13021-RB | 114..446 | 17..349 | 1665 | 100 | Plus |
CG13021-RA | 597 | CG13021-RA | 100..432 | 17..349 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3515260..3515592 | 17..349 | 1665 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:48:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 2659..2709 | 20..68 | 105 | 72.5 | Plus |
BS12625.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:47:17 Download gff for
BS12625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RC | 1..333 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:35:12 Download gff for
BS12625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RC | 330..669 | 11..349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:15 Download gff for
BS12625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 100..431 | 17..348 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:47:17 Download gff for
BS12625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RC | 330..669 | 11..349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:19 Download gff for
BS12625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 100..431 | 17..348 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:19 Download gff for
BS12625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3515260..3515591 | 17..348 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:15 Download gff for
BS12625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3409293..3409624 | 17..348 | 100 | | Plus |
BS12625.pep Sequence
Translation from 16 to 348
> BS12625.pep
MSDYSKFLSNLTDQLALLPKVAPKGLGRLGSLENLGNNLGNLRPAHKALM
CVGVATVACVVLGFTVKSLKGHSRKDKQRIINVRIGNPIKRELEGADKDE
GSFGKEEELN*
BS12625.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:05:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-PB | 110 | CG13021-PB | 1..110 | 1..110 | 560 | 100 | Plus |
CG13021-PA | 110 | CG13021-PA | 1..110 | 1..110 | 560 | 100 | Plus |