Clone Sequence Records
BS12651.3prime Sequence
360 bp (360 high quality bases) assembled on 2006-10-13
> BS12651.3prime
ATGGTCTAGAAAGCTTCTAGTAACTGCCATAGATCATCTTTCGCCGGAAC
TCTGCCCACTGGTAGGTGCTGGAAAAGCATTGCCGTTGTCTTTTACAAAA
CTGATCAAAGGCCTCCGTGCTTTTTCGATTCTTCTCCGAAGGAGATATTT
CGCACTGCCGGTTGGATGAGACTTCTTGATTCGGTTTAGGTGGCAGTTCC
CCTTTGCTGAAGTAAACGAGGGGAATAGTGCGACGCAGCTCCGGATGGAC
AAAGACTCCGGGCTTCTGGCAGATCTGGGGTCGTCGATGAAGTCTCCTGG
TGAGTTGAAGACCTCTGCCTGACAGTGTCCTAAGAATATTGATCATGTCG
ACTGATAACT
BS12651.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12126-PA | 330 | CG12126-RA | 1..330 | 346..17 | 1625 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:10:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12126-RA | 605 | CG12126-RA | 79..409 | 347..17 | 1640 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:10:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8262870..8263200 | 17..347 | 1640 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:10:11 has no hits.
BS12651.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:31:58 Download gff for
BS12651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-PA | 1..330 | 17..346 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:02:17 Download gff for
BS12651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 76..409 | 17..353 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:17:08 Download gff for
BS12651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 76..409 | 17..353 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:17:08 Download gff for
BS12651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8262870..8263203 | 17..353 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:02:17 Download gff for
BS12651.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4150375..4150708 | 17..353 | 98 | | Plus |
BS12651.5prime Sequence
360 bp (360 high quality bases) assembled on 2006-10-13
> BS12651.5prime
GAAGTTATCAGTCGACATGATCAATATTCTTAGGACACTGTCAGGCAGAG
GTCTTCAACTCACCAGGAGACTTCATCGACGACCCCAGATCTGCCAGAAG
CCCGGAGTCTTTGTCCATCCGGAGCTGCGTCGCACTATTCCCCTCGTTTA
CTTCAGCAAAGGGGAACTGCCACCTAAACCGAATCAAGAAGTCTCATCCA
ACCGGCAGTGCGAAATATCTCCTTCGGAGAAGAATCGAAAAAGCACGGAG
GCCTTTGATCAGTTTTGTAAAAGACAACGGCAATGCTTTTCCAGCACCTA
CCAGTGGGCAGAGTTCCGGCGAAAGATGATCTATGGCAGTTACTAGAAGC
TTTCTAGACC
BS12651.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:29:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12126-PA | 330 | CG12126-RA | 1..330 | 17..346 | 1625 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:35:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12126-RA | 605 | CG12126-RA | 79..409 | 16..346 | 1640 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8262870..8263200 | 346..16 | 1640 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:35:09 has no hits.
BS12651.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:31:59 Download gff for
BS12651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-PA | 1..330 | 17..346 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:23:10 Download gff for
BS12651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 76..409 | 10..346 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:12:24 Download gff for
BS12651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 76..409 | 10..346 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:12:24 Download gff for
BS12651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8262870..8263203 | 10..346 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:23:10 Download gff for
BS12651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4150375..4150708 | 10..346 | 98 | | Minus |
BS12651.complete Sequence
362 bp assembled on 2006-11-01
GenBank Submission: FJ637249
> BS12651.complete
GAAGTTATCAGTCGACATGATCAATATTCTTAGGACACTGTCAGGCAGAG
GTCTTCAACTCACCAGGAGACTTCATCGACGACCCCAGATCTGCCAGAAG
CCCGGAGTCTTTGTCCATCCGGAGCTGCGTCGCACTATTCCCCTCGTTTA
CTTCAGCAAAGGGGAACTGCCACCTAAACCGAATCAAGAAGTCTCATCCA
ACCGGCAGTGCGAAATATCTCCTTCGGAGAAGAATCGAAAAAGCACGGAG
GCCTTTGATCAGTTTTGTAAAAGACAACGGCAATGCTTTTCCAGCACCTA
CCAGTGGGCAGAGTTCCGGCGAAAGATGATCTATGGCAGTTACTAGAAGC
TTTCTAGACCAT
BS12651.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:40:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12126-RA | 330 | CG12126-PA | 1..330 | 17..346 | 1635 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:40:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12126-RA | 605 | CG12126-RA | 79..409 | 16..346 | 1640 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:40:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8262870..8263200 | 346..16 | 1640 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:40:17 has no hits.
BS12651.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:43:35 Download gff for
BS12651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 1..330 | 17..346 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:17:56 Download gff for
BS12651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 76..409 | 10..346 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:57:07 Download gff for
BS12651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 80..409 | 17..346 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:43:35 Download gff for
BS12651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 76..409 | 10..346 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:28 Download gff for
BS12651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12126-RA | 80..409 | 17..346 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:28 Download gff for
BS12651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8262870..8263199 | 17..346 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:57:07 Download gff for
BS12651.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4150375..4150704 | 17..346 | 99 | | Minus |
BS12651.pep Sequence
Translation from 16 to 345
> BS12651.pep
MINILRTLSGRGLQLTRRLHRRPQICQKPGVFVHPELRRTIPLVYFSKGE
LPPKPNQEVSSNRQCEISPSEKNRKSTEAFDQFCKRQRQCFSSTYQWAEF
RRKMIYGSY*
BS12651.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12126-PA | 109 | CG12126-PA | 1..109 | 1..109 | 583 | 100 | Plus |
