Clone Sequence Records
BS12691.complete Sequence
227 bp assembled on 2006-11-01
GenBank Submission: FJ637272
> BS12691.complete
GAAGTTATCAGTCGACATGCCCTGTTGTAAGCGTACCGAGGTCCGCAGGG
TGTGCCGGCCGATGCCGTCGCTCCTTGCCAGGCTCAACTGTACGCCGTGC
AACCGCGTCCTGTTCTTCGTCATCGGCGTGGGACTGGGCGTGCTCTTTGT
GCGCAACAAGGACGACAAGTCGGGCGGCAAAAAGAAGGACGAAGGCAAGG
CCAAGAAGTAGAAGCTTTCTAGACCAT
BS12691.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:20:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12902-RC | 195 | CG12902-PC | 1..195 | 17..211 | 945 | 99 | Plus |
CG12902-RB | 195 | CG12902-PB | 1..195 | 17..211 | 945 | 99 | Plus |
CG12902-RA | 195 | CG12902-PA | 1..195 | 17..211 | 945 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:20:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43397-RB | 896 | CG43397-RB | 387..582 | 16..211 | 950 | 99 | Plus |
CG43397-RA | 1047 | CG43397-RA | 538..733 | 16..211 | 950 | 99 | Plus |
CG12902-RC | 664 | CG12902-RC | 155..350 | 16..211 | 950 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:20:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10355038..10355233 | 211..16 | 950 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:20:22 has no hits.
BS12691.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:17 Download gff for
BS12691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12902-RB | 1..195 | 17..211 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:50:50 Download gff for
BS12691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12902-RA | 529..737 | 5..216 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:55 Download gff for
BS12691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43397-RB | 388..582 | 17..211 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:17 Download gff for
BS12691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12902-RA | 529..737 | 5..216 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:25 Download gff for
BS12691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12902-RC | 156..350 | 17..211 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:25 Download gff for
BS12691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10355038..10355232 | 17..211 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:55 Download gff for
BS12691.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6242543..6242737 | 17..211 | 98 | | Minus |
BS12691.3prime Sequence
225 bp (225 high quality bases) assembled on 2006-10-13
> BS12691.3prime
ATGGTCTAGAAAGCTTCTACTTCTTGGCCTTGCCTTCGTCCTTCTTTTTG
CCGCCCGACTTGTCGTCCTTGTTGCGCACAAAGAGCACGCCCAGTCCCAC
GCCGATGACGAAGAACAGGACGCGGTTGCACGGCGTACAGTTGAGCCTGG
CAAGGAGCGACGGCATCGGCCGGCACACCCTGCGGACCTCGGTACGCTTA
CAACAGGGCATGTCGACTGATAACT
BS12691.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:30:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12902-PA | 195 | CG12902-RA | 1..195 | 211..17 | 925 | 98.9 | Minus |
CG12902-PB | 195 | CG12902-RB | 1..195 | 211..17 | 925 | 98.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:11:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43397-RB | 896 | CG43397-RB | 387..582 | 212..17 | 950 | 99 | Minus |
CG43397-RA | 1047 | CG43397-RA | 538..733 | 212..17 | 950 | 99 | Minus |
CG12902-RC | 664 | CG12902-RC | 155..350 | 212..17 | 950 | 99 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:11:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10355038..10355233 | 17..212 | 950 | 99 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:11:44 has no hits.
BS12691.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:32:29 Download gff for
BS12691.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12902-PB | 1..195 | 17..211 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:45:35 Download gff for
BS12691.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43397-RB | 378..586 | 12..223 | 95 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:33:25 Download gff for
BS12691.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12902-RC | 146..354 | 12..223 | 95 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:33:25 Download gff for
BS12691.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10355034..10355240 | 12..223 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:45:35 Download gff for
BS12691.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6242539..6242745 | 12..223 | 95 | | Plus |
BS12691.5prime Sequence
225 bp (225 high quality bases) assembled on 2006-10-13
> BS12691.5prime
GAAGTTATCAGTCGACATGCCCTGTTGTAAGCGTACCGAGGTCCGCAGGG
TGTGCCGGCCGATGCCGTCGCTCCTTGCCAGGCTCAACTGTACGCCGTGC
AACCGCGTCCTGTTCTTCGTCATCGGCGTGGGACTGGGCGTGCTCTTTGT
GCGCAACAAGGACGACAAGTCGGGCGGCAAAAAGAAGGACGAAGGCAAGG
CCAAGAAGTAGAAGCTTTCTAGACC
BS12691.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:30:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12902-PA | 195 | CG12902-RA | 1..195 | 17..211 | 925 | 98.9 | Plus |
CG12902-PB | 195 | CG12902-RB | 1..195 | 17..211 | 925 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43397-RB | 896 | CG43397-RB | 387..582 | 16..211 | 950 | 99 | Plus |
CG43397-RA | 1047 | CG43397-RA | 538..733 | 16..211 | 950 | 99 | Plus |
CG12902-RC | 664 | CG12902-RC | 155..350 | 16..211 | 950 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:55:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10355038..10355233 | 211..16 | 950 | 99 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:55:21 has no hits.
BS12691.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:32:29 Download gff for
BS12691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12902-PB | 1..195 | 17..211 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:21:16 Download gff for
BS12691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43397-RB | 378..586 | 5..216 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:05:48 Download gff for
BS12691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12902-RC | 146..354 | 5..216 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:05:48 Download gff for
BS12691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10355034..10355240 | 5..216 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:21:16 Download gff for
BS12691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6242539..6242745 | 5..216 | 95 | | Minus |
BS12691.pep Sequence
Translation from 16 to 210
> BS12691.pep
MPCCKRTEVRRVCRPMPSLLARLNCTPCNRVLFFVIGVGLGVLFVRNKDD
KSGGKKKDEGKAKK*
BS12691.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:32:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12902-PC | 64 | CG12902-PC | 1..64 | 1..64 | 345 | 100 | Plus |
CG12902-PB | 64 | CG12902-PB | 1..64 | 1..64 | 345 | 100 | Plus |
CG12902-PA | 64 | CG12902-PA | 1..64 | 1..64 | 345 | 100 | Plus |