Clone Sequence Records
BS12750.3prime Sequence
711 bp (697 high quality bases) assembled on 2006-10-13
> BS12750.3prime
ATGGTCTAGAAAGCTTTCACCAACTCGTACGGCCAAAGATCATGTTGTGC
CGGAACTCCGCCCAGCGGGTGCGATGGCTGCGGTAGGAGTTGTATGGCGA
GATGACCTTTCGGGAAATGGAGGCGCTATCGGGCAAACGTTCCGTTTGCT
TGGAGGCGCTGGCCACGCGTTGGAGAAGCTCCTGCTCAGCCCGGGCGCGA
TCCATCTCCTCCTCCGAGTTGTCCTCCGGCGGTCCGAAAACGGTCTCCCG
TACCGATCGAACCTCCAGATCCGACTCGTAGTCGTGCTCCTCGGCCTTGG
CTTCTGGATCGCCGTCCAGTCTTTGCTCTTCCTCCTGCCTCTGCTGGTAT
TGGGACACCTGCGCCGACTTGAAGTTCCGCCTCCTGGCCGCGTTCTGGGC
GGCCACCACATTGTTGCGGCGGGGCACCATCTCATCCGGTTTGGCAACTG
GTCGGAACATGGCGGAGTCCAGGCCGGAGTAGTTGTTGCTCCACCGGCGG
TTCTGCTGCCTCTGGCGGAGCAGCTGGGCTGCCGCAAAAGACTCCTCTCT
CATGGGCCAGTCCTTGTGGCAGGGATTTACGTTTTGGGCTGCGCTGTTTT
GACCTTTCTCTAGGCCCGATATCCAGCGCCGCCCCTCAATTAGACTCCGC
TTGGCCAGGTGGCGAATGCATGGCAGGTTTTTCACGAATATTGGCATGTC
GACTGATAACT
BS12750.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 20:43:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-PA | 681 | CG30376-RA | 1..676 | 697..22 | 3380 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:20:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-RA | 941 | CG30376-RA | 134..809 | 697..22 | 3380 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:20:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8263618..8264293 | 22..697 | 3380 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 07:20:06 has no hits.
BS12750.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:33:08 Download gff for
BS12750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-PA | 1..681 | 17..697 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:14:40 Download gff for
BS12750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..816 | 13..697 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:46:31 Download gff for
BS12750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..816 | 13..697 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:46:31 Download gff for
BS12750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8263611..8264293 | 13..697 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:14:40 Download gff for
BS12750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4151116..4151798 | 13..697 | 99 | | Plus |
BS12750.5prime Sequence
659 bp (606 high quality bases) assembled on 2006-10-13
> BS12750.5prime
GAAGTTATCAGTCGACATGCCAATATTCGTGAAAAACCTGCCATGCATTC
GCCACCTGGCCAAGCGGAGTCTAATTGAGGGGCGGCGCTGGATATCGGGC
CTAGAGAAAGGTCAAAACAGCGCAGCCCAAAACGTAAATCCCTGCCACAA
GGACTGGCCCATGAGAGAGGAGTCTTTTGCGGCAGCCCAGCTGCTCCGCC
AGAGGCAGCAGAACCGCCGGTGGAGCAACAACTACTCCGGCCTGGACTCC
GCCATGTTCCGACCAGTTGCCAAACCGGATGAGATGGTGCCCCGCCGCAA
CAATGTGGTGGCCGCCCAGAACGCGGCCAGGAGGCGGAACTTCAAGTCGG
CGCAGGTGTCCCAATACCAGCAGAGGCAGGAGGAAGAGCAAAGACTGGAC
GGCGATCCAGAAGCCAAGGCCGAGGAGCACGACTACGAGTCGGATCTGGA
GGTTCGATCGGTACGGGAGACCGTTTTCGGACCGCCGGAGGACAACTCGG
AGGAGGAGATGGATCGCGCCCGGGCTGAGCAGGAGCTTCTCCAACGCGTG
GCCAGCGCCCTCCAAAGCAAACGGAACGTTTGCCCGATAGCGCCTCCATT
TCCCGAAAGGTCATCTCGCCATACAACTCCTACCGCAGCCATCGCACCCG
CTGGGCGGA
BS12750.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 20:43:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-PA | 681 | CG30376-RA | 1..641 | 17..659 | 3135 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:35:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-RA | 941 | CG30376-RA | 134..774 | 17..659 | 3165 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:35:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8263653..8264293 | 659..17 | 3120 | 99.4 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:35:23 has no hits.
BS12750.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:33:08 Download gff for
BS12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-PA | 1..640 | 17..658 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:38:17 Download gff for
BS12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..773 | 17..658 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:45:36 Download gff for
BS12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..773 | 17..658 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:45:36 Download gff for
BS12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8263654..8264293 | 17..658 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:38:17 Download gff for
BS12750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4151159..4151798 | 17..658 | 99 | | Minus |
BS12750.complete Sequence
713 bp assembled on 2008-08-14
GenBank Submission: FJ637284
> BS12750.complete
GAAGTTATCAGTCGACATGCCAATATTCGTGAAAAACCTGCCATGCATTC
GCCACCTGGCCAAGCGGAGTCTAATTGAGGGGCGGCGCTGGATATCGGGC
CTAGAGAAAGGTCAAAACAGCGCAGCCCAAAACGTAAATCCCTGCCACAA
GGACTGGCCCATGAGAGAGGAGTCTTTTGCGGCAGCCCAGCTGCTCCGCC
AGAGGCAGCAGAACCGCCGGTGGAGCAACAACTACTCCGGCCTGGACTCC
GCCATGTTCCGACCAGTTGCCAAACCGGATGAGATGGTGCCCCGCCGCAA
CAATGTGGTGGCCGCCCAGAACGCGGCCAGGAGGCGGAACTTCAAGTCGG
CGCAGGTGTCCCAATACCAGCAGAGGCAGGAGGAAGAGCAAAGACTGGAC
GGCGATCCAGAAGCCAAGGCCGAGGAGCACGACTACGAGTCGGATCTGGA
GGTTCGATCGGTACGGGAGACCGTTTTCGGACCGCCGGAGGACAACTCGG
AGGAGGAGATGGATCGCGCCCGGGCTGAGCAGGAGCTTCTCCAACGCGTG
GCCAGCGCCTCCAAGCAAACGGAACGTTTGCCCGATAGCGCCTCCATTTC
CCGAAAGGTCATCTCGCCATACAACTCCTACCGCAGCCATCGCACCCGCT
GGGCGGAGTTCCGGCACAACATGATCTTTGGCCGTACGAGTTACTGAAAG
CTTTCTAGACCAT
BS12750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:38:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-RA | 681 | CG30376-PA | 1..681 | 17..697 | 3405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:38:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-RA | 941 | CG30376-RA | 134..814 | 17..697 | 3405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:38:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8263613..8264293 | 697..17 | 3405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:38:18 has no hits.
BS12750.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:59:46 Download gff for
BS12750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..814 | 17..697 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:28:34 Download gff for
BS12750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..813 | 17..696 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:27 Download gff for
BS12750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..813 | 17..696 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:35:26 Download gff for
BS12750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..813 | 17..696 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:35:26 Download gff for
BS12750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8263614..8264293 | 17..696 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:28:34 Download gff for
BS12750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4151119..4151798 | 17..696 | 100 | | Minus |
BS12750.pep Sequence
Translation from 16 to 696
> BS12750.pep
MPIFVKNLPCIRHLAKRSLIEGRRWISGLEKGQNSAAQNVNPCHKDWPMR
EESFAAAQLLRQRQQNRRWSNNYSGLDSAMFRPVAKPDEMVPRRNNVVAA
QNAARRRNFKSAQVSQYQQRQEEEQRLDGDPEAKAEEHDYESDLEVRSVR
ETVFGPPEDNSEEEMDRARAEQELLQRVASASKQTERLPDSASISRKVIS
PYNSYRSHRTRWAEFRHNMIFGRTSY*
BS12750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:56:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-PA | 226 | CG30376-PA | 1..226 | 1..226 | 1178 | 100 | Plus |
