Clone Sequence Records
BS12824.3prime Sequence
727 bp (706 high quality bases) assembled on 2006-10-13
> BS12824.3prime
ATGGTCTAGAAAGCTTTTAGTAGCAGGAGTACTGCCTTTCCAGCTGGACG
CACACATCGCACTGGAGTCGGAATCCCCAGACCAGCTTGCAATTGCACCT
CCTCTCGGTTCTCACGTGCTGGGATCTCACTCGGTATCCGCACACGCGGC
ACAACTGCTGGCAGGAGAGGCGTTCCTCCAGAGAACCACTGCCATCCTTG
GAGCACTGGCGACCCCGTGTTCCTTTCCACAATCCGGTGGCATCGCGTTC
GCAGTAGTTGGGCGAGTCCTGCATGAAGACCAGCGAGTCTAGGGGAATGT
TCTGCCACATAATCTTTAGATTGCTACTGGCTCCTTCTAGTTGGATGGCA
TCGTCGTACATTTGGAGGAGATCCTGGGCAATGGCTTCGAATGGCTTTAG
TACCGCCACACACTCCTCCTCCTGGCATTCACCCTGCACAGCTCCTGGTT
GCTTGCACCGGCATTCCTGTTCCAGTGATCTTTGTAGTAGAGCTCCCACC
ACCCGTCGATTGTGACCGATGGCTCCTGATCCCGATCCGAAATGCTTCTC
GTACTGCTCCAGTGCCTTGGTGGGTTCGTGGGCACAGGGTACATTCAGAG
CATTTTCCGTGCATCCGCATCCGGCGATTACTCCATTGGCACAGTCCTTG
GTCAGAGTATGGACTATGGCTGCCATGGAAATGGCCGCCACATAGACATC
CTCCCGATTTGGTGAGTTTCCTCCGGC
BS12824.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:31:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8458-PA | 930 | wntD-RA | 228..930 | 719..17 | 3515 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-RA | 1147 | CG8458-RA | 279..991 | 727..16 | 3540 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13292208..13292911 | 16..719 | 3520 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:16:50 has no hits.
BS12824.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:33:56 Download gff for
BS12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8458-PA | 219..930 | 17..727 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:46:51 Download gff for
BS12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 279..999 | 8..727 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:30:24 Download gff for
BS12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 279..999 | 8..727 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:30:24 Download gff for
BS12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13292200..13292920 | 8..727 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:46:51 Download gff for
BS12824.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9117922..9118642 | 8..727 | 99 | | Plus |
BS12824.5prime Sequence
841 bp (750 high quality bases) assembled on 2006-10-13
> BS12824.5prime
GAAGTTATCAGTCGACATGATTTTTGCCATCACATTCTTCATGGGTATTA
CGAGCACTCTGGCAGCAGTTTTGGAGCCCATGAGCTACTACCAGTACACC
CAGTTCCAGGCACCACTCTCCTGGGAGGATATAACCGGCAAGGGGCTGAA
ACAGGCCCTCGACAGCTGCCAACAGAGTTTCCAGTGGCAGCGATGGAACT
GTCCGAGCCAGGATTTCGTGCAGAAGAATTCCAAGCCGGAGGAAAACTCA
CCAAATCGGGAGGATGTCTATGTGGCGGCCATTTCCATGGCAGCCATAGT
CCATACTCTGACCAAGGACTGTGCCAATGGAGTAATCGCCGGATGCGGAT
GCACGGAAAATGCTCTGAATGTACCCTGTGCCCACGAACCCACCAAGGCA
CTGGAGCAGTACGAGAAGCATTTCGGATCGGGATCAGGAGCCATCGGTCA
CAATCGACGGGTGGTGGGAGCTCTACTACAAAGATCACTGGAACAGGAAT
GCCGGTGCAAGCAACCAGGAGCTGTGCAGGGTGAATGCCAGGAGGAGGAG
TGTGTGGCGGTACTAAAGCCATTCGAAGCCATTGCCCAGGATCTCCTCCA
AATGTACGACGATGCCATCCAACTAGAAGGAGCCAGTAGCAATCTAAAGA
TTATGTGGCAGAACATTCCCCTAGACTCGCTGGTCTTCATGCAGGACTCG
CCCAACTACTGCGAACGCGATGCCACCGGATTGTGGAAAGGAACACGGGG
TCGCCAGTGCTCCAAGGATGGCAGTGGTTCTCTGGAGGAACGCCTCTCCT
GCCAGCAGTTGTGCCGCGTGTGCGGATACCGAGTGAAATCC
BS12824.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:31:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8458-PA | 930 | wntD-RA | 1..820 | 17..836 | 4100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-RA | 1147 | CG8458-RA | 59..885 | 15..841 | 4120 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:46:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13292314..13293140 | 841..15 | 4120 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:46:27 has no hits.
BS12824.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:33:57 Download gff for
BS12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8458-PA | 1..825 | 17..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:31:32 Download gff for
BS12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 53..885 | 9..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:39:22 Download gff for
BS12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 53..885 | 9..841 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:39:22 Download gff for
BS12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13292314..13293143 | 11..841 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:31:32 Download gff for
BS12824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9118036..9118865 | 11..841 | 99 | <- | Minus |
BS12824.complete Sequence
962 bp assembled on 2006-11-01
GenBank Submission: FJ637305
> BS12824.complete
GAAGTTATCAGTCGACATGATTTTTGCCATCACATTCTTCATGGGTATTA
CGAGCACTCTGGCAGCAGTTTTGGAGCCCATGAGCTACTACCAGTACACC
CAGTTCCAGGCACCACTCTCCTGGGAGGATATAACCGGCAAGGGGCTGAA
ACAGGCCCTCGACAGCTGCCAACAGAGTTTCCAGTGGCAGCGATGGAACT
GTCCGAGCCAGGATTTCGTGCAGAAGAATTCCAAGCCGGAGGAAAACTCA
CCAAATCGGGAGGATGTCTATGTGGCGGCCATTTCCATGGCAGCCATAGT
CCATACTCTGACCAAGGACTGTGCCAATGGAGTAATCGCCGGATGCGGAT
GCACGGAAAATGCTCTGAATGTACCCTGTGCCCACGAACCCACCAAGGCA
CTGGAGCAGTACGAGAAGCATTTCGGATCGGGATCAGGAGCCATCGGTCA
CAATCGACGGGTGGTGGGAGCTCTACTACAAAGATCACTGGAACAGGAAT
GCCGGTGCAAGCAACCAGGAGCTGTGCAGGGTGAATGCCAGGAGGAGGAG
TGTGTGGCGGTACTAAAGCCATTCGAAGCCATTGCCCAGGATCTCCTCCA
AATGTACGACGATGCCATCCAACTAGAAGGAGCCAGTAGCAATCTAAAGA
TTATGTGGCAGAACATTCCCCTAGACTCGCTGGTCTTCATGCAGGACTCG
CCCAACTACTGCGAACGCGATGCCACCGGATTGTGGAAAGGAACACGGGG
TCGCCAGTGCTCCAAGGATGGCAGTGGTTCTCTGGAGGAACGCCTCTCCT
GCCAGCAGTTGTGCCGCGTGTGCGGATACCGAGTGAGATCCCAGCACGTG
AGAACCGAGAGGAGGTGCAATTGCAAGCTGGTCTGGGGATTCCGACTCCA
GTGCGATGTGTGCGTCCAGCTGGAAAGGCAGTACTCCTGCTACTAAAAGC
TTTCTAGACCAT
BS12824.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:05:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-RA | 930 | CG8458-PA | 1..930 | 17..946 | 4650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:05:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-RA | 1147 | CG8458-RA | 59..991 | 15..947 | 4665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:05:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13292208..13293140 | 947..15 | 4665 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:05:24 has no hits.
BS12824.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:42:50 Download gff for
BS12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 1..930 | 17..946 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:17:00 Download gff for
BS12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 53..999 | 9..955 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:19 Download gff for
BS12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 61..988 | 17..944 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:42:50 Download gff for
BS12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 53..999 | 9..955 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:52 Download gff for
BS12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wntD-RA | 61..988 | 17..944 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:52 Download gff for
BS12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13292211..13293138 | 17..944 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:19 Download gff for
BS12824.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9117933..9118860 | 17..944 | 100 | | Minus |
BS12824.pep Sequence
Translation from 16 to 945
> BS12824.pep
MIFAITFFMGITSTLAAVLEPMSYYQYTQFQAPLSWEDITGKGLKQALDS
CQQSFQWQRWNCPSQDFVQKNSKPEENSPNREDVYVAAISMAAIVHTLTK
DCANGVIAGCGCTENALNVPCAHEPTKALEQYEKHFGSGSGAIGHNRRVV
GALLQRSLEQECRCKQPGAVQGECQEEECVAVLKPFEAIAQDLLQMYDDA
IQLEGASSNLKIMWQNIPLDSLVFMQDSPNYCERDATGLWKGTRGRQCSK
DGSGSLEERLSCQQLCRVCGYRVRSQHVRTERRCNCKLVWGFRLQCDVCV
QLERQYSCY*
BS12824.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wntD-PA | 309 | CG8458-PA | 1..309 | 1..309 | 1673 | 100 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 28..324 | 41..308 | 273 | 27.3 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 55..351 | 41..308 | 273 | 27.3 | Plus |
| Wnt4-PB | 539 | CG4698-PB | 270..538 | 47..308 | 190 | 24.6 | Plus |
| Wnt4-PA | 539 | CG4698-PA | 270..538 | 47..308 | 190 | 24.6 | Plus |
