Clone Sequence Records
BS12863.3prime Sequence
510 bp (510 high quality bases) assembled on 2006-10-13
> BS12863.3prime
ATGGTCTAGAAAGCTTCTACTCCACATCGATGTCTTTTGTGACGCGACCC
ACCCAGTAAACGAATCCGGTCTGCACCACGGTGGCCATGAACTTGACGTT
GCCCTTGTAGCCTGCTGGCGGAATCCAGTCGAAGGTGATGCCGGTCAGCG
GCTTGCCCTTTTGCGCACTCAGATGGGTGATGGTGTCGTCCTTGCCGGAG
CAGTCCAAGGTCTGCGAGTGCACGGAGTCCACCACCTGGAACTGGCCGAC
GACGCGGTTCTGGCCATCGCGTGCCTGGATCATGAAGCCAAGGAACTCAT
CGCCGCCCAGCGTCAGGGTCAGCTTTTGATCCGAGCGCACATGGGAGGGT
CCGGAGATGCTGTACGGCGGCTTGGTCACCTGCAGCTTGGCTCCGTGCTG
GGGCGTCAGGTCACGACAGGCGGCCTTTGGAGCACCATCGGAGTAGGCGT
GGACACTGATGGCCAGGCAGGCCGCAAGAACCAACAAACGGAACATGTCG
ACTGATAACT
BS12863.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:31:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7532-PA | 480 | CG7532-RA | 1..480 | 496..17 | 2400 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:17:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)34Fc-RA | 656 | CG7532-RA | 54..538 | 501..17 | 2410 | 99.8 | Minus |
l(2)34Fc-RB | 733 | CG7532-RB | 42..521 | 496..17 | 2400 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:17:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14349232..14349645 | 17..430 | 2070 | 100 | Plus |
2L | 23513712 | 2L | 14349708..14349780 | 424..496 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 10:17:05 has no hits.
BS12863.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:34:21 Download gff for
BS12863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7532-PA | 1..480 | 17..496 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:36:12 Download gff for
BS12863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)34Fc-RA | 46..547 | 5..510 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:45:23 Download gff for
BS12863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)34Fc-RA | 46..547 | 5..510 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:45:23 Download gff for
BS12863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14349219..14349639 | 5..424 | 98 | <- | Plus |
2L | 14349709..14349785 | 425..504 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:36:12 Download gff for
BS12863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14349219..14349639 | 5..424 | 98 | <- | Plus |
arm_2L | 14349709..14349785 | 425..504 | 95 | | Plus |
BS12863.5prime Sequence
510 bp (510 high quality bases) assembled on 2006-10-13
> BS12863.5prime
GAAGTTATCAGTCGACATGTTCCGTTTGTTGGTTCTTGCGGCCTGCCTGG
CCATCAGTGTCCACGCCTACTCCGATGGTGCTCCAAAGGCCGCCTGTCGT
GACCTGACGCCCCAGCACGGAGCCAAGCTGCAGGTGACCAAGCCGCCGTA
CAGCATCTCCGGACCCTCCCATGTGCGCTCGGATCAAAAGCTGACCCTGA
CGCTGGGCGGCGATGAGTTCCTTGGCTTCATGATCCAGGCACGCGATGGC
CAGAACCGCGTCGTCGGCCAGTTCCAGGTGGTGGACTCCGTGCACTCGCA
GACCTTGGACTGCTCCGGCAAGGACGACACCATCACCCATCTGAGTGCGC
AAAAGGGCAAGCCGCTGACCGGCATCACCTTCGACTGGATTCCGCCAGCA
GGCTACAAGGGCAACGTCAAGTTCATGGCCACCGTGGTGCAGACCGGATT
CGTTTACTGGGTGGGTCGCGTCACAAAAGACATCGATGTGGAGTAGAAGC
TTTCTAGACC
BS12863.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:31:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7532-PA | 480 | CG7532-RA | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:00:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)34Fc-RA | 656 | CG7532-RA | 54..538 | 12..496 | 2410 | 99.8 | Plus |
l(2)34Fc-RB | 733 | CG7532-RB | 42..521 | 17..496 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:00:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14349232..14349645 | 496..83 | 2070 | 100 | Minus |
2L | 23513712 | 2L | 14349708..14349780 | 89..17 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:00:31 has no hits.
BS12863.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:34:21 Download gff for
BS12863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7532-PA | 1..480 | 17..496 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:33:33 Download gff for
BS12863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)34Fc-RA | 47..547 | 5..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:00:18 Download gff for
BS12863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)34Fc-RA | 47..547 | 5..508 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:00:18 Download gff for
BS12863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14349219..14349639 | 89..508 | 98 | <- | Minus |
2L | 14349709..14349785 | 9..88 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:33:33 Download gff for
BS12863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14349219..14349639 | 89..508 | 98 | <- | Minus |
arm_2L | 14349709..14349785 | 9..88 | 95 | | Minus |
BS12863.complete Sequence
512 bp assembled on 2006-11-01
GenBank Submission: FJ637316
> BS12863.complete
GAAGTTATCAGTCGACATGTTCCGTTTGTTGGTTCTTGCGGCCTGCCTGG
CCATCAGTGTCCACGCCTACTCCGATGGTGCTCCAAAGGCCGCCTGTCGT
GACCTGACGCCCCAGCACGGAGCCAAGCTGCAGGTGACCAAGCCGCCGTA
CAGCATCTCCGGACCCTCCCATGTGCGCTCGGATCAAAAGCTGACCCTGA
CGCTGGGCGGCGATGAGTTCCTTGGCTTCATGATCCAGGCACGCGATGGC
CAGAACCGCGTCGTCGGCCAGTTCCAGGTGGTGGACTCCGTGCACTCGCA
GACCTTGGACTGCTCCGGCAAGGACGACACCATCACCCATCTGAGTGCGC
AAAAGGGCAAGCCGCTGACCGGCATCACCTTCGACTGGATTCCGCCAGCA
GGCTACAAGGGCAACGTCAAGTTCATGGCCACCGTGGTGCAGACCGGATT
CGTTTACTGGGTGGGTCGCGTCACAAAAGACATCGATGTGGAGTAGAAGC
TTTCTAGACCAT
BS12863.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:40:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)34Fc-RB | 480 | CG7532-PB | 1..480 | 17..496 | 2400 | 100 | Plus |
l(2)34Fc-RA | 480 | CG7532-PA | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:40:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)34Fc-RA | 656 | CG7532-RA | 54..538 | 12..496 | 2410 | 99.8 | Plus |
l(2)34Fc-RB | 733 | CG7532-RB | 42..521 | 17..496 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:40:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14349232..14349645 | 496..83 | 2070 | 100 | Minus |
2L | 23513712 | 2L | 14349708..14349780 | 89..17 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:40:19 has no hits.
BS12863.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:24 Download gff for
BS12863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7532-RA | 1..480 | 17..496 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:13 Download gff for
BS12863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7532-RA | 44..544 | 5..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:52:56 Download gff for
BS12863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)34Fc-RA | 64..538 | 22..496 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:24 Download gff for
BS12863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7532-RA | 44..544 | 5..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:23:55 Download gff for
BS12863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)34Fc-RA | 64..538 | 22..496 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:23:55 Download gff for
BS12863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14349232..14349639 | 89..496 | 100 | <- | Minus |
2L | 14349709..14349775 | 22..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:52:56 Download gff for
BS12863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14349232..14349639 | 89..496 | 100 | <- | Minus |
arm_2L | 14349709..14349775 | 22..88 | 100 | | Minus |
BS12863.pep Sequence
Translation from 16 to 495
> BS12863.pep
MFRLLVLAACLAISVHAYSDGAPKAACRDLTPQHGAKLQVTKPPYSISGP
SHVRSDQKLTLTLGGDEFLGFMIQARDGQNRVVGQFQVVDSVHSQTLDCS
GKDDTITHLSAQKGKPLTGITFDWIPPAGYKGNVKFMATVVQTGFVYWVG
RVTKDIDVE*
BS12863.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)34Fc-PB | 159 | CG7532-PB | 1..159 | 1..159 | 836 | 100 | Plus |
l(2)34Fc-PA | 159 | CG7532-PA | 1..159 | 1..159 | 836 | 100 | Plus |