Clone Sequence Records
BS13012.3prime Sequence
725 bp (691 high quality bases) assembled on 2006-10-13
> BS13012.3prime
ATGGTCTAGAAAGCTTTCAGCTGGCCACAGCGTCCAGTTGCTCCTGGATG
GCATTCAGCGCAAAGATGGTGCTAAAGCACATGCCCACGGTGGCCACCTC
CAATTGGCTGATGTTGTAGTGCAGCGGCAGTCGCCACAGGACAAAGTGAT
TCAGCAGAACAAGCAGGGCCAGGCCAAGTGACCACCAGTGCTCGTCGACG
ATGGCGATGCGCCAAAGACAGTGGACATTCCACAGAACACAGAGGCCCAA
TTGCGCGGCATCCAGTTTTATGAATGTGGCACCCAGTGGACTGCGACTGT
TGCCGAACCACAAGCTGGTGACTGCAAGTGCCAGTACAGCGCTCCACAGT
CCAAAGGCCAGACGCTCCCAGTCGGCGCCGAAGAAGTCACCCATTCGGGT
GGCCGGATTTACGGTCTGCAGCTCGCCCACCACCAGGGTGACAAATAGGA
CGCAGGAGTAACGTCTCGACTTGTCGCACAGCAGACGCTGCACTGCGCCC
GGATTGGGATGCGTGTGCCGCAGCAGGCAGAGCAGGCTGTGGCCAAAGTA
GATCCCAAAGGCGGCCATCGCCTTGCTGCCGGTGCTCCGTTTCAGACCCC
AGCCGGAGATCACGGCCAGGACGAAATGGATCAGGCACAGGGCTAGCAGG
GAGGTGCCACCACTGGACCCCGGCAAGGGACCATGATTCGGAGGAGGACT
TCTGTTGGACACCATGTCGACTGAT
BS13012.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:33:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-PA | 699 | CG13014-RA | 1..699 | 715..17 | 3470 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:16:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-RA | 1058 | CG13014-RA | 236..934 | 715..17 | 3480 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:16:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16588108..16588806 | 715..17 | 3480 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-08 12:16:36 has no hits.
BS13012.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:05 Download gff for
BS13012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-PA | 1..699 | 17..715 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:41:24 Download gff for
BS13012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..942 | 8..715 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:46:00 Download gff for
BS13012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..942 | 8..715 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:46:00 Download gff for
BS13012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16588108..16588814 | 8..715 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:41:24 Download gff for
BS13012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16482141..16482847 | 8..715 | 99 | | Minus |
BS13012.5prime Sequence
729 bp (729 high quality bases) assembled on 2006-10-13
> BS13012.5prime
GAAGTTATCAGTCGACATGGTGTCCAACAGAAGTCCTCCTCCGAATCATG
GTCCCTTGCCGGGGTCCAGTGGTGGCACCTCCCTGCTAGCCCTGTGCCTG
ATCCACTTCGTCCTGGCCGTGATCTCCGGCTGGGGTCTGAAACGGAGCAC
CGGCAGCAAGGCGATGGCCGCCTTTGGGATCTACTTTGGCCACAGCCTGC
TCTGCCTGCTGCGGCACACGCATCCCAATCCGGGCGCAGTGCAGCGTCTG
CTGTGCGACAAGTCGAGACGTTACTCCTGCGTCCTATTTGTCACCCTGGT
GGTGGGCGAGCTGCAGACCGTAAATCCGGCCACCCGAATGGGTGACTTCT
TCGGCGCCGACTGGGAGCGTCTGGCCTTTGGACTGTGGAGCGCTGTACTG
GCACTTGCAGTCACCAGCTTGTGGTTCGGCAACAGTCGCAGTCCACTGGG
TGCCACATTCATAAAACTGGATGCCGCGCAATTGGGCCTCTGTGTTCTGT
GGAATGTCCACTGTCTTTGGCGCATCGCCATCGTCGACGAGCACTGGTGG
TCACTTGGCCTGGCCCTGCTTGTTCTGCTGAATCACTTTGTCCTGTGGCG
ACTGCCGCTGCACTACAACATCAGCCAATTGGAGGTGGCCACCGTGGGCA
TGTGCTTTAGCACCATCTTTGCGCTGAATGCCATCCAGGAGCAACTGGAC
GCTGTGGCCAGCTGAAAGCTTTCTAGACC
BS13012.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:33:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-PA | 699 | CG13014-RA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:55:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-RA | 1058 | CG13014-RA | 236..934 | 17..715 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:55:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16588108..16588806 | 17..715 | 3495 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:55:15 has no hits.
BS13012.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:06 Download gff for
BS13012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-PA | 1..699 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:45:01 Download gff for
BS13012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..942 | 17..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:49:27 Download gff for
BS13012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..942 | 17..724 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:49:27 Download gff for
BS13012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16588108..16588814 | 17..724 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:45:01 Download gff for
BS13012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16482141..16482847 | 17..724 | 99 | | Plus |
BS13012.complete Sequence
731 bp assembled on 2006-11-01
GenBank Submission: FJ637354
> BS13012.complete
GAAGTTATCAGTCGACATGGTGTCCAACAGAAGTCCTCCTCCGAATCATG
GTCCCTTGCCGGGGTCCAGTGGTGGCACCTCCCTGCTAGCCCTGTGCCTG
ATCCACTTCGTCCTGGCCGTGATCTCCGGCTGGGGTCTGAAACGGAGCAC
CGGCAGCAAGGCGATGGCCGCCTTTGGGATCTACTTTGGCCACAGCCTGC
TCTGCCTGCTGCGGCACACGCATCCCAATCCGGGCGCAGTGCAGCGTCTG
CTGTGCGACAAGTCGAGACGTTACTCCTGCGTCCTATTTGTCACCCTGGT
GGTGGGCGAGCTGCAGACCGTAAATCCGGCCACCCGAATGGGTGACTTCT
TCGGCGCCGACTGGGAGCGTCTGGCCTTTGGACTGTGGAGCGCTGTACTG
GCACTTGCAGTCACCAGCTTGTGGTTCGGCAACAGTCGCAGTCCACTGGG
TGCCACATTCATAAAACTGGATGCCGCGCAATTGGGCCTCTGTGTTCTGT
GGAATGTCCACTGTCTTTGGCGCATCGCCATCGTCGACGAGCACTGGTGG
TCACTTGGCCTGGCCCTGCTTGTTCTGCTGAATCACTTTGTCCTGTGGCG
ACTGCCGCTGCACTACAACATCAGCCAATTGGAGGTGGCCACCGTGGGCA
TGTGCTTTAGCACCATCTTTGCGCTGAATGCCATCCAGGAGCAACTGGAC
GCTGTGGCCAGCTGAAAGCTTTCTAGACCAT
BS13012.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:31:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-RA | 699 | CG13014-PA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:31:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-RA | 1058 | CG13014-RA | 236..934 | 17..715 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16588108..16588806 | 17..715 | 3495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:31:44 has no hits.
BS13012.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:41:46 Download gff for
BS13012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 1..699 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:15:47 Download gff for
BS13012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 198..904 | 17..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:54:01 Download gff for
BS13012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..933 | 17..714 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:41:46 Download gff for
BS13012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 198..904 | 17..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:03 Download gff for
BS13012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13014-RA | 236..933 | 17..714 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:03 Download gff for
BS13012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16588108..16588805 | 17..714 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:54:01 Download gff for
BS13012.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16482141..16482838 | 17..714 | 100 | | Plus |
BS13012.pep Sequence
Translation from 16 to 714
> BS13012.pep
MVSNRSPPPNHGPLPGSSGGTSLLALCLIHFVLAVISGWGLKRSTGSKAM
AAFGIYFGHSLLCLLRHTHPNPGAVQRLLCDKSRRYSCVLFVTLVVGELQ
TVNPATRMGDFFGADWERLAFGLWSAVLALAVTSLWFGNSRSPLGATFIK
LDAAQLGLCVLWNVHCLWRIAIVDEHWWSLGLALLVLLNHFVLWRLPLHY
NISQLEVATVGMCFSTIFALNAIQEQLDAVAS*
BS13012.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13014-PA | 232 | CG13014-PA | 1..232 | 1..232 | 1233 | 100 | Plus |
