Clone Sequence Records
BS13018.complete Sequence
636 bp assembled on 2010-02-09
GenBank Submission: KX803094
> BS13018.complete
GAAGTTATCAGTCGACATGGGAAAACACAAGAAAACGCAGAAGGTTAAGA
AACAACGTAATGCACAGCTTAAACGCATCATAAAACCCACAGACGCGCGG
CTTAAGGATCAGATTCGAGTGAAAAGAAAGAAGGCCGAGGATCCGCACCA
GATCAAGGTGCACGAGGCCACCCAGCAGAGCTCCGCTCTGTTCTTCCAGT
ACAACACCCAGCTGGGACCGCCGTACCACATCGTTCTGGACACGAACTTC
ATTAACTTTAGCATTAAGAACAAACTGGATATTGTGCAAGGTATGATGGA
CTGTCTGTATGCCAAGTGCATACCCTATATCTCCGACTGCGTGCGTGCCG
AGCTGGAGAAGCTGGGCAACAAGTACAAGCTGGCCCTGCGCATCATCTCC
GATCCCAGATTCGAGCGACTGCCGTGCCTGCACAAGGGCACCTATGCGGA
CGATTGCCTCGTGGAGCGGGTGCGCCAGCACAAATGCTACATTGTGGCCA
CCAACGACAAGGACCTTAAGAATCGCATCCGGAAGATTCCCGGCGTGCCC
ATCATGTACGTGGCTGCGCATAAGTACGCGATTGAGCGTATGCCAGAAGC
GTATGGAGTCAAGGCGTAGAAGCCTTTCTAGACCAT
BS13018.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bka-RA | 603 | CG4539-PA | 1..603 | 17..619 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bka-RA | 758 | CG4539-RA | 92..695 | 17..620 | 3020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:29:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9895440..9896041 | 19..620 | 3010 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:30:00 has no hits.
BS13018.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:46 Download gff for
BS13018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 90..692 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:30 Download gff for
BS13018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 92..694 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:26:10 Download gff for
BS13018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 90..692 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:20 Download gff for
BS13018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 92..694 | 17..619 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:20 Download gff for
BS13018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9895439..9896040 | 17..619 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:30 Download gff for
BS13018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9895439..9896040 | 17..619 | 99 | | Plus |
BS13018.5prime Sequence
634 bp (634 high quality bases) assembled on 2006-10-13
> BS13018.5prime
GAAGTTATCAGTCGACATGGGAAAACACAAGAAAACGCAGAAGGTTAAGA
AACAACGTAATGCACAGCTTAAACGCATCATAAAACCCACAGACGCGCGG
CTTAAGGATCAGATTCGAGTGAAAAGAAAGAAGGCCGAGGATCCGCACCA
GATCAAGGTGCACGAGGCCACCCAGCAGAGCTCCGCTCTGTTCTTCCAGT
ACAACACCCAGCTGGGACCGCCGTACCACATCGTTCTGGACACGAACTTC
ATTAACTTTAGCATTAAGAACAAACTGGATATTGTGCAAGGTATGATGGA
CTGTCTGTATGCCAAGTGCATACCCTATATCTCCGACTGCGTGCGTGCCG
AGCTGGAGAAGCTGGGCAACAAGTACAAGCTGGCCCTGCGCATCATCTCC
GATCCCAGATTCGAGCGACTGCCGTGCCTGCACAAGGGCACCTATGCGGA
CGATTGCCTCGTGGAGCGGGTGCGCCAGCACAAATGCTACATTGTGGCCA
CCAACGACAAGGACCTTAAGAATCGCATCCGGAAGATTCCCGGCGTGCCC
ATCATGTACGTGGCTGCGCATAAGTACGCGATTGAGCGTATGCCAGAAGC
GTAAGGAGTCAAGGCGTATAAGCCTTTCTAGACC
BS13018.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 21:17:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4539-PA | 603 | Bka-RA | 1..602 | 17..618 | 2985 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:39:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bka-RA | 758 | CG4539-RA | 92..693 | 17..618 | 2995 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:39:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9895440..9896039 | 19..618 | 2985 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:39:41 has no hits.
BS13018.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:12 Download gff for
BS13018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4539-PA | 1..603 | 17..619 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:38:46 Download gff for
BS13018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 83..700 | 9..627 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:56:11 Download gff for
BS13018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 83..700 | 9..627 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:56:11 Download gff for
BS13018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9895431..9896046 | 8..627 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:38:46 Download gff for
BS13018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9895431..9896046 | 8..627 | 98 | | Plus |
BS13018.pep Sequence
Translation from 16 to 618
> BS13018.pep
MGKHKKTQKVKKQRNAQLKRIIKPTDARLKDQIRVKRKKAEDPHQIKVHE
ATQQSSALFFQYNTQLGPPYHIVLDTNFINFSIKNKLDIVQGMMDCLYAK
CIPYISDCVRAELEKLGNKYKLALRIISDPRFERLPCLHKGTYADDCLVE
RVRQHKCYIVATNDKDLKNRIRKIPGVPIMYVAAHKYAIERMPEAYGVKA
*
BS13018.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:12:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bka-PA | 200 | CG4539-PA | 1..200 | 1..200 | 1053 | 100 | Plus |
