Clone Sequence Records
BS13025.3prime Sequence
465 bp (465 high quality bases) assembled on 2006-10-13
> BS13025.3prime
ATGGTCTAGAAAGCTTCTAACCGGAGCAGCCGCGACAACCGCAGTGGACA
CACTCAACGATCCGACCCTCTTCCAGTTTGCATTTGGGCACCCGGCATAT
GCAGTTCGTGCCGAAATTGGTGTCCCTCGTTTGAATGCAGCGCAGGCAGC
ATAGGTTCTCGTATCCAGACTTCTTCCACTTGGCAATCAGATTGCCATCG
GCAATCTTCTCCTTCAGACAGTAGTCGTACAATTCCCGGCTGATGGCTTT
CCGGCGATAGAATAGATCGTAGATGTATCGTGTCTTCTGGTGGTGGATCT
TGAAAATGGGCCAAAGGGATTCCGTAATGCGTTTGCCCTCGTGCGGTTCC
GTTTCGGCTTCGCGCATTTTTTGCTCCAGTTCCTCGAGAGTTGGTTCGAT
CAGCTCCCAACCGTCTGGCGGTGGTTTGCGACTGCGGCGAACCTTGGGCA
TGTCGACTGATAACT
BS13025.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:33:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1639-PA | 435 | l(1)10Bb-RA | 1..435 | 451..17 | 2175 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:38:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)10Bb-RA | 934 | CG1639-RA | 124..559 | 451..16 | 2180 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:37:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11324669..11325012 | 16..359 | 1720 | 100 | Plus |
X | 23542271 | X | 11325092..11325185 | 358..451 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 10:38:02 has no hits.
BS13025.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:17 Download gff for
BS13025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1639-PA | 1..435 | 17..451 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:43:40 Download gff for
BS13025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 116..559 | 16..459 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:27:56 Download gff for
BS13025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 116..559 | 16..459 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:27:56 Download gff for
BS13025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11325092..11325193 | 358..459 | 96 | | Plus |
X | 11324669..11325010 | 16..357 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:43:40 Download gff for
BS13025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11218702..11219043 | 16..357 | 100 | <- | Plus |
arm_X | 11219125..11219226 | 358..459 | 96 | | Plus |
BS13025.5prime Sequence
465 bp (465 high quality bases) assembled on 2006-10-13
> BS13025.5prime
GAAGTTATCAGTCGACATGCCCAAGGTTCGCCGCAGTCGCAAACCACCGC
CAGACGGTTGGGAGCTGATCGAACCAACTCTCGAGGAACTGGAGCAAAAA
ATGCGCGAAGCCGAAACGGAACCGCACGAGGGCAAACGCATTACGGAATC
CCTTTGGCCCATTTTCAAGATCCACCACCAGAAGACACGATACATCTACG
ATCTATTCTATCGCCGGAAAGCCATCAGCCGGGAATTGTACGACTACTGT
CTGAAGGAGAAGATTGCCGATGGCAATCTGATTGCCAAGTGGAAGAAGTC
TGGATACGAGAACCTATGCTGCCTGCGCTGCATTCAAACGAGGGACACCA
ATTTCGGCACGAACTGCATATGCCGGGTGCCCAAATGCAAACTGGAAGAG
GGTCGGATCGTTGAGTGTGTCCACTGCGGTTGTCGCGGCTGCTCCGGTTA
GAAGCTTTCTAGACC
BS13025.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:33:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1639-PA | 435 | l(1)10Bb-RA | 1..435 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:12:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)10Bb-RA | 934 | CG1639-RA | 124..559 | 17..452 | 2180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:12:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11324669..11325012 | 452..109 | 1720 | 100 | Minus |
X | 23542271 | X | 11325092..11325185 | 110..17 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:12:19 has no hits.
BS13025.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:17 Download gff for
BS13025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1639-PA | 1..435 | 17..451 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:17:11 Download gff for
BS13025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 116..559 | 9..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:53:32 Download gff for
BS13025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 116..559 | 9..452 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:53:32 Download gff for
BS13025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11324669..11325010 | 111..452 | 100 | <- | Minus |
X | 11325092..11325193 | 9..110 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:17:11 Download gff for
BS13025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11218702..11219043 | 111..452 | 100 | <- | Minus |
arm_X | 11219125..11219226 | 9..110 | 96 | | Minus |
BS13025.complete Sequence
467 bp assembled on 2006-11-01
GenBank Submission: FJ637357
> BS13025.complete
GAAGTTATCAGTCGACATGCCCAAGGTTCGCCGCAGTCGCAAACCACCGC
CAGACGGTTGGGAGCTGATCGAACCAACTCTCGAGGAACTGGAGCAAAAA
ATGCGCGAAGCCGAAACGGAACCGCACGAGGGCAAACGCATTACGGAATC
CCTTTGGCCCATTTTCAAGATCCACCACCAGAAGACACGATACATCTACG
ATCTATTCTATCGCCGGAAAGCCATCAGCCGGGAATTGTACGACTACTGT
CTGAAGGAGAAGATTGCCGATGGCAATCTGATTGCCAAGTGGAAGAAGTC
TGGATACGAGAACCTATGCTGCCTGCGCTGCATTCAAACGAGGGACACCA
ATTTCGGCACGAACTGCATATGCCGGGTGCCCAAATGCAAACTGGAAGAG
GGTCGGATCGTTGAGTGTGTCCACTGCGGTTGTCGCGGCTGCTCCGGTTA
GAAGCTTTCTAGACCAT
BS13025.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:41:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)10Bb-RA | 435 | CG1639-PA | 1..435 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:42:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)10Bb-RA | 934 | CG1639-RA | 124..559 | 17..452 | 2180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11324669..11325012 | 452..109 | 1720 | 100 | Minus |
X | 23542271 | X | 11325092..11325185 | 110..17 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:41:57 has no hits.
BS13025.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:19:03 Download gff for
BS13025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 1..435 | 17..451 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:00:05 Download gff for
BS13025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 107..550 | 9..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:04 Download gff for
BS13025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 124..558 | 17..451 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:19:03 Download gff for
BS13025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 107..550 | 9..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:36 Download gff for
BS13025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)10Bb-RA | 124..558 | 17..451 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:36 Download gff for
BS13025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11324670..11325010 | 111..451 | 100 | <- | Minus |
X | 11325092..11325185 | 17..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:04 Download gff for
BS13025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11218703..11219043 | 111..451 | 100 | <- | Minus |
arm_X | 11219125..11219218 | 17..110 | 100 | | Minus |
BS13025.pep Sequence
Translation from 16 to 450
> BS13025.pep
MPKVRRSRKPPPDGWELIEPTLEELEQKMREAETEPHEGKRITESLWPIF
KIHHQKTRYIYDLFYRRKAISRELYDYCLKEKIADGNLIAKWKKSGYENL
CCLRCIQTRDTNFGTNCICRVPKCKLEEGRIVECVHCGCRGCSG*
BS13025.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:53:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)10Bb-PA | 144 | CG1639-PA | 1..144 | 1..144 | 808 | 100 | Plus |