Clone Sequence Records
BS13037.complete Sequence
1426 bp assembled on 2009-12-07
GenBank Submission: KX804388
> BS13037.complete
GAAGTTATCAGTCGACATGGAGTTGTCATTGTTCACATTAAATTTGTTCG
ATGTGGTCTCGGTGGTGCTCACATTTCTTGTGATATTTCTAGTGCAAATT
CTTAACGTTTACTTGCATATACTCGACGATAATGCCGATAATGGCAAATC
GATCGATGTGGTGGACAAGGCACCAGCGAAAGAATGCCCGTTACTTGAGT
CCCAGTCACCCAGTTCACCAATCGCCACCACTCTACCGAAATCCCAGGCA
TCGAGCAACGGCAAGTTGGAGAAGCAAATAAGTCTGCTGGACAGCGATAG
CCACGAGGATGAGGACACATTGTCCTTGGAAAATCTGTTTCCCTGCGATC
AAACCGAGATCTATGCCTCCAAGAAGATCAGCTTCATAATCGACGAGCTC
ATCCAGACGGAGGTGAACTATGTGAACAATCTGAAGAAGGGTATGCTAAA
CTATGGACAGCTGAAGGATGTCGAGGATTTGCCAGAAGCCCTGAGTGGCG
AAACGAAACAAAAGATGCTGCTGGGAAACATTAAGGAAATACTGGAGCTG
CATGAGAAGGAGATACTGCCGCTCATGTTGCGCAATCAGCGGGATCTCAA
AGGTCTATTCGATGAGTTTGCTGCTCACTTCGAGAAAAATAGCTTCTATT
GCTATGTGAGCTTCACTATGGGGAAGAAGTCTTCTATGCAACTGCGACAG
GATAATCGGCTGTGGTTGCAGACATATCAAACCCAAATAAAAGACAAGCT
GGGCATCGACAGCTTCCTAGTTCAGCCCATCCAAAGACTGACCAGATATC
CATTGCTCCTGCAGCAGTTCATATCGGAATTCTACAAAAGTGGAATTAGT
TGCAAGCCAGTGCTGACTGCAGTTTGCAAACTCGAGACGCGCATGCGACG
CGCTCTGGATGTGGTCAATCAGGCCGAGGAGATACCCAACATCGAGGAGC
TCAACGAGTTGGACGTCCTGCAGCTGGGAAACTTCCGCCGTGCGACGGAA
TTCGACGCCCAGCACTTTCCCACCCGGAAAAAGTACCGCTCCAAGGTGTT
CCTGTTCGATCGCTGTTTGGTGTGCACGGAGGTGCGAAAGAAGCGGCTGG
CCTACCGGCAGCACTACAACTGGGAGCACGTGGAGCTGCAGAGGCCACTG
GACTCGGTCTCGTCCAATGCCAACAAGATCATTAACCTGCTAGTGAAACA
GGAGGAGGGCGGATCTAGTGTCGGCTCCAAGCGGGAGGAGTACTCCTTTA
TGGCTGCGGAGGCGTCGGTGGTGAAGCAGTGGCTCCAGGCCACCCACAAG
ATCATCGAGATCGCACGCAATGAGCACGCCAGGCGGAACACCTTTAGCCT
GCCCATGGACCTGGTCCTCGGCGTGGTGCTGGCCATCTGGCTGATCTGGC
AGTACTTGTAAAGCTTTCTAGACCAT
BS13037.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:59:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15611-RB | 1395 | CG15611-PB | 1..1395 | 17..1411 | 6975 | 100 | Plus |
CG15611-RA | 1527 | CG15611-PA | 417..1527 | 301..1411 | 5555 | 100 | Plus |
CG15611-RA | 1527 | CG15611-PA | 1..285 | 17..301 | 1425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:59:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15611-RB | 1627 | CG15611-RB | 150..1545 | 17..1412 | 6980 | 100 | Plus |
CG15611-RA | 1759 | CG15611-RA | 566..1677 | 301..1412 | 5560 | 100 | Plus |
CG15611-RA | 1759 | CG15611-RA | 150..434 | 17..301 | 1425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:59:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17113823..17114278 | 957..1412 | 2280 | 100 | Plus |
2R | 25286936 | 2R | 17110165..17110500 | 299..634 | 1680 | 100 | Plus |
2R | 25286936 | 2R | 17108993..17109276 | 17..300 | 1420 | 100 | Plus |
2R | 25286936 | 2R | 17113628..17113760 | 826..958 | 665 | 100 | Plus |
2R | 25286936 | 2R | 17113466..17113573 | 720..827 | 540 | 100 | Plus |
2R | 25286936 | 2R | 17113316..17113404 | 633..721 | 445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:59:41 has no hits.
BS13037.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:08 Download gff for
BS13037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-RB | 147..1539 | 17..1409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:10 Download gff for
BS13037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-RB | 150..1542 | 17..1409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:19:09 Download gff for
BS13037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-RB | 147..1539 | 17..1409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:29 Download gff for
BS13037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-RB | 150..1542 | 17..1409 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:29 Download gff for
BS13037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17113629..17113760 | 827..958 | 100 | -> | Plus |
2R | 17110167..17110500 | 301..634 | 100 | -> | Plus |
2R | 17113318..17113404 | 635..721 | 100 | -> | Plus |
2R | 17108993..17109276 | 17..300 | 100 | -> | Plus |
2R | 17113468..17113572 | 722..826 | 100 | -> | Plus |
2R | 17113825..17114275 | 959..1409 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:10 Download gff for
BS13037.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12996498..12996781 | 17..300 | 100 | -> | Plus |
arm_2R | 12997672..12998005 | 301..634 | 100 | -> | Plus |
arm_2R | 13000823..13000909 | 635..721 | 100 | -> | Plus |
arm_2R | 13000973..13001077 | 722..826 | 100 | -> | Plus |
arm_2R | 13001134..13001265 | 827..958 | 100 | -> | Plus |
arm_2R | 13001330..13001780 | 959..1409 | 100 | | Plus |
BS13037.3prime Sequence
728 bp (675 high quality bases) assembled on 2006-10-13
> BS13037.3prime
ATGGTCTAGAAAGCTTTACAAGTACTGCCAGATCAGCCAGATGGCCAGCA
CCACGCCGAGGACCAGGTCCATGGGCAGGCTAAAGGTGTTCCGCCTGGCG
TGCTCATTGCGTGCGATCTCGATGATCTTGTGGGTGGCCTGGAGCCACTG
CTTCACCACCGACGCCTCCGCAGCCATAAAGGAGTACTCCTCCCGCTTGG
AGCCGACACTAGATCCGCCCTCCTCCTGTTTCACTAGCAGGTTAATGATC
TTGTTGGCATTGGACGAGACCGAGTCCAGTGGCCTCTGCAGCTCCACGTG
CTCCCAGTTGTAGTGCTGCCGGTAGGCCAGCCGCTTCTTTCGCACCTCCG
TGCACACCAAACAGCGATCGAACAGGAACACCTTGGAGCGGTACTTTTTC
CGGGTGGGAAAGTGCTGGGCGTCGAATTCCGTCGCACGGCGGAAGTTTCC
CAGCTGCAGGACGTCCAACTCGTTGAGCTCCTCGATGTTGGGTATCTCCT
CGGCCTGATTGACCACATCCAGAGCGCGTCGCATGCGCGTCTCGAGTTTG
CAAACTGCAGTCAGCACTGGCTTGCAACTAATTCCACTTTTGTAGAATTC
CGATATGAACTGCTGCAGGAGCAATGGATATCTGGTCAGTCTTTGGATGG
GCTGAACTAGGAAGCTGTCGATGCCCCACTTGTCTTTTATTTGGGTTTGA
TATGTCTGCCACCACAGCCGATTATCCT
BS13037.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 21:19:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15611-PB | 1395 | CG15611-RB | 683..1395 | 728..16 | 3490 | 99.5 | Minus |
CG15611-PA | 1527 | CG15611-RA | 815..1527 | 728..16 | 3490 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:06:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15611-RA | 1759 | CG15611-RA | 964..1677 | 728..15 | 3525 | 99.6 | Minus |
CG15611-RB | 1627 | CG15611-RB | 832..1545 | 728..15 | 3525 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17113823..17114278 | 470..15 | 2280 | 100 | Minus |
2R | 25286936 | 2R | 17113628..17113760 | 601..469 | 665 | 100 | Minus |
2R | 25286936 | 2R | 17113466..17113573 | 707..600 | 510 | 98.1 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:06:53 has no hits.
BS13037.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:27 Download gff for
BS13037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-PA | 815..1527 | 16..728 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:33:50 Download gff for
BS13037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-RB | 832..1551 | 9..728 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:14:57 Download gff for
BS13037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-RB | 832..1551 | 9..728 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:14:57 Download gff for
BS13037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17113468..17113572 | 601..705 | 98 | -> | Minus |
2R | 17113629..17113760 | 469..600 | 100 | -> | Minus |
2R | 17113382..17113404 | 706..728 | 95 | -> | Minus |
2R | 17113825..17114284 | 9..468 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:33:50 Download gff for
BS13037.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13001134..13001265 | 469..600 | 100 | -> | Minus |
arm_2R | 13000887..13000909 | 706..728 | 95 | -> | Minus |
arm_2R | 13000973..13001077 | 601..705 | 98 | -> | Minus |
arm_2R | 13001330..13001789 | 9..468 | 99 | | Minus |
BS13037.5prime Sequence
674 bp (670 high quality bases) assembled on 2006-10-13
> BS13037.5prime
GAAGTTATCAGTCGACATGGAGTTGTCATTGTTCACATTAAATTTGTTCG
ATGTGGTCTCGGTGGTGCTCACATTTCTTGTGATATTTCTAGTGCAAATT
CTTAACGTTTACTTGCATATACTCGACGATAATGCCGATAATGGCAAATC
GATCGATGTGGTGGACAAGGCACCAGCGAAAGAATGCCCGTTACTTGAGT
CCCAGTCACCCAGTTCACCAATCGCCACCACTCTACCGAAATCCCAGGCA
TCGAGCAACGGCAAGTTGGAGAAGCAAATAAGTCTGCTGGACAGCGATAG
CCACGAGGATGAGGACACATTGTCCTTGGAAAATCTGTTTCCCTGCGATC
AAACCGAGATCTATGCCTCCAAGAAGATCAGCTTCATAATCGACGAGCTC
ATCCAGACGGAGGTGAACTATGTGAACAATCTGAAGAAGGGTATGCTAAA
CTATGGACAGCTGAAGGATGTCGAGGATTTGCCAGAAGCCCTGAGTGGCG
AAACGAAACAAAAGATGCTGCTGGGAAACATTAAGGAAATACTGGAGCTG
CATGAGAAGGAGATACTGCCGCTCATGTTGCGCAATCAGCGGGATCTCAA
AGGTCTATTCGATGAATTTGCTGCTCACTTCGAGAAAAATAGCTTCTATT
GCTATGTGAGCTTCACTATGGGGA
BS13037.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 21:19:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15611-PB | 1395 | CG15611-RB | 1..658 | 17..674 | 3265 | 99.8 | Plus |
CG15611-PA | 1527 | CG15611-RA | 417..790 | 301..674 | 1845 | 99.7 | Plus |
CG15611-PA | 1527 | CG15611-RA | 1..285 | 17..301 | 1425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:33:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15611-RB | 1627 | CG15611-RB | 150..807 | 17..674 | 3275 | 99.8 | Plus |
CG15611-RA | 1759 | CG15611-RA | 566..939 | 301..674 | 1855 | 99.7 | Plus |
CG15611-RA | 1759 | CG15611-RA | 150..434 | 17..301 | 1425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:33:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17110165..17110500 | 299..634 | 1665 | 99.7 | Plus |
2R | 25286936 | 2R | 17108993..17109276 | 17..300 | 1420 | 100 | Plus |
2R | 25286936 | 2R | 17113316..17113357 | 633..674 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:33:22 has no hits.
BS13037.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:28 Download gff for
BS13037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-PB | 1..657 | 17..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:06:53 Download gff for
BS13037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-RB | 140..806 | 7..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:41:13 Download gff for
BS13037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15611-RB | 140..806 | 7..673 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:41:13 Download gff for
BS13037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17108983..17109276 | 7..300 | 98 | -> | Plus |
2R | 17110167..17110500 | 301..634 | 99 | -> | Plus |
2R | 17113318..17113356 | 635..673 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:06:53 Download gff for
BS13037.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12996488..12996781 | 7..300 | 98 | -> | Plus |
arm_2R | 12997672..12998005 | 301..634 | 99 | -> | Plus |
arm_2R | 13000823..13000861 | 635..673 | 100 | | Plus |
BS13037.pep Sequence
Translation from 16 to 1410
> BS13037.pep
MELSLFTLNLFDVVSVVLTFLVIFLVQILNVYLHILDDNADNGKSIDVVD
KAPAKECPLLESQSPSSPIATTLPKSQASSNGKLEKQISLLDSDSHEDED
TLSLENLFPCDQTEIYASKKISFIIDELIQTEVNYVNNLKKGMLNYGQLK
DVEDLPEALSGETKQKMLLGNIKEILELHEKEILPLMLRNQRDLKGLFDE
FAAHFEKNSFYCYVSFTMGKKSSMQLRQDNRLWLQTYQTQIKDKLGIDSF
LVQPIQRLTRYPLLLQQFISEFYKSGISCKPVLTAVCKLETRMRRALDVV
NQAEEIPNIEELNELDVLQLGNFRRATEFDAQHFPTRKKYRSKVFLFDRC
LVCTEVRKKRLAYRQHYNWEHVELQRPLDSVSSNANKIINLLVKQEEGGS
SVGSKREEYSFMAAEASVVKQWLQATHKIIEIARNEHARRNTFSLPMDLV
LGVVLAIWLIWQYL*
BS13037.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:57:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15611-PB | 464 | CG15611-PB | 1..464 | 1..464 | 2367 | 100 | Plus |
CG15611-PA | 508 | CG15611-PA | 1..508 | 1..464 | 2312 | 91.3 | Plus |
CG30456-PC | 443 | CG30456-PC | 80..334 | 117..372 | 555 | 44.4 | Plus |
CG30456-PD | 592 | CG30456-PD | 229..483 | 117..372 | 555 | 44.4 | Plus |
CG30456-PB | 682 | CG30456-PB | 319..573 | 117..372 | 555 | 44.4 | Plus |