Clone BS13037 Report

Search the DGRC for BS13037

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:130
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG15611-RB
Protein status:BS13037.pep: full length peptide match
Sequenced Size:1426

Clone Sequence Records

BS13037.complete Sequence

1426 bp assembled on 2009-12-07

GenBank Submission: KX804388

> BS13037.complete
GAAGTTATCAGTCGACATGGAGTTGTCATTGTTCACATTAAATTTGTTCG
ATGTGGTCTCGGTGGTGCTCACATTTCTTGTGATATTTCTAGTGCAAATT
CTTAACGTTTACTTGCATATACTCGACGATAATGCCGATAATGGCAAATC
GATCGATGTGGTGGACAAGGCACCAGCGAAAGAATGCCCGTTACTTGAGT
CCCAGTCACCCAGTTCACCAATCGCCACCACTCTACCGAAATCCCAGGCA
TCGAGCAACGGCAAGTTGGAGAAGCAAATAAGTCTGCTGGACAGCGATAG
CCACGAGGATGAGGACACATTGTCCTTGGAAAATCTGTTTCCCTGCGATC
AAACCGAGATCTATGCCTCCAAGAAGATCAGCTTCATAATCGACGAGCTC
ATCCAGACGGAGGTGAACTATGTGAACAATCTGAAGAAGGGTATGCTAAA
CTATGGACAGCTGAAGGATGTCGAGGATTTGCCAGAAGCCCTGAGTGGCG
AAACGAAACAAAAGATGCTGCTGGGAAACATTAAGGAAATACTGGAGCTG
CATGAGAAGGAGATACTGCCGCTCATGTTGCGCAATCAGCGGGATCTCAA
AGGTCTATTCGATGAGTTTGCTGCTCACTTCGAGAAAAATAGCTTCTATT
GCTATGTGAGCTTCACTATGGGGAAGAAGTCTTCTATGCAACTGCGACAG
GATAATCGGCTGTGGTTGCAGACATATCAAACCCAAATAAAAGACAAGCT
GGGCATCGACAGCTTCCTAGTTCAGCCCATCCAAAGACTGACCAGATATC
CATTGCTCCTGCAGCAGTTCATATCGGAATTCTACAAAAGTGGAATTAGT
TGCAAGCCAGTGCTGACTGCAGTTTGCAAACTCGAGACGCGCATGCGACG
CGCTCTGGATGTGGTCAATCAGGCCGAGGAGATACCCAACATCGAGGAGC
TCAACGAGTTGGACGTCCTGCAGCTGGGAAACTTCCGCCGTGCGACGGAA
TTCGACGCCCAGCACTTTCCCACCCGGAAAAAGTACCGCTCCAAGGTGTT
CCTGTTCGATCGCTGTTTGGTGTGCACGGAGGTGCGAAAGAAGCGGCTGG
CCTACCGGCAGCACTACAACTGGGAGCACGTGGAGCTGCAGAGGCCACTG
GACTCGGTCTCGTCCAATGCCAACAAGATCATTAACCTGCTAGTGAAACA
GGAGGAGGGCGGATCTAGTGTCGGCTCCAAGCGGGAGGAGTACTCCTTTA
TGGCTGCGGAGGCGTCGGTGGTGAAGCAGTGGCTCCAGGCCACCCACAAG
ATCATCGAGATCGCACGCAATGAGCACGCCAGGCGGAACACCTTTAGCCT
GCCCATGGACCTGGTCCTCGGCGTGGTGCTGGCCATCTGGCTGATCTGGC
AGTACTTGTAAAGCTTTCTAGACCAT

BS13037.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:59:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15611-RB 1395 CG15611-PB 1..1395 17..1411 6975 100 Plus
CG15611-RA 1527 CG15611-PA 417..1527 301..1411 5555 100 Plus
CG15611-RA 1527 CG15611-PA 1..285 17..301 1425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:59:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15611-RB 1627 CG15611-RB 150..1545 17..1412 6980 100 Plus
CG15611-RA 1759 CG15611-RA 566..1677 301..1412 5560 100 Plus
CG15611-RA 1759 CG15611-RA 150..434 17..301 1425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:59:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17113823..17114278 957..1412 2280 100 Plus
2R 25286936 2R 17110165..17110500 299..634 1680 100 Plus
2R 25286936 2R 17108993..17109276 17..300 1420 100 Plus
2R 25286936 2R 17113628..17113760 826..958 665 100 Plus
2R 25286936 2R 17113466..17113573 720..827 540 100 Plus
2R 25286936 2R 17113316..17113404 633..721 445 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:59:41 has no hits.

BS13037.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:08 Download gff for BS13037.complete
Subject Subject Range Query Range Percent Splice Strand
CG15611-RB 147..1539 17..1409 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:10 Download gff for BS13037.complete
Subject Subject Range Query Range Percent Splice Strand
CG15611-RB 150..1542 17..1409 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:19:09 Download gff for BS13037.complete
Subject Subject Range Query Range Percent Splice Strand
CG15611-RB 147..1539 17..1409 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:29 Download gff for BS13037.complete
Subject Subject Range Query Range Percent Splice Strand
CG15611-RB 150..1542 17..1409 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:29 Download gff for BS13037.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17113629..17113760 827..958 100 -> Plus
2R 17110167..17110500 301..634 100 -> Plus
2R 17113318..17113404 635..721 100 -> Plus
2R 17108993..17109276 17..300 100 -> Plus
2R 17113468..17113572 722..826 100 -> Plus
2R 17113825..17114275 959..1409 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:10 Download gff for BS13037.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12996498..12996781 17..300 100 -> Plus
arm_2R 12997672..12998005 301..634 100 -> Plus
arm_2R 13000823..13000909 635..721 100 -> Plus
arm_2R 13000973..13001077 722..826 100 -> Plus
arm_2R 13001134..13001265 827..958 100 -> Plus
arm_2R 13001330..13001780 959..1409 100   Plus

BS13037.3prime Sequence

728 bp (675 high quality bases) assembled on 2006-10-13

> BS13037.3prime
ATGGTCTAGAAAGCTTTACAAGTACTGCCAGATCAGCCAGATGGCCAGCA
CCACGCCGAGGACCAGGTCCATGGGCAGGCTAAAGGTGTTCCGCCTGGCG
TGCTCATTGCGTGCGATCTCGATGATCTTGTGGGTGGCCTGGAGCCACTG
CTTCACCACCGACGCCTCCGCAGCCATAAAGGAGTACTCCTCCCGCTTGG
AGCCGACACTAGATCCGCCCTCCTCCTGTTTCACTAGCAGGTTAATGATC
TTGTTGGCATTGGACGAGACCGAGTCCAGTGGCCTCTGCAGCTCCACGTG
CTCCCAGTTGTAGTGCTGCCGGTAGGCCAGCCGCTTCTTTCGCACCTCCG
TGCACACCAAACAGCGATCGAACAGGAACACCTTGGAGCGGTACTTTTTC
CGGGTGGGAAAGTGCTGGGCGTCGAATTCCGTCGCACGGCGGAAGTTTCC
CAGCTGCAGGACGTCCAACTCGTTGAGCTCCTCGATGTTGGGTATCTCCT
CGGCCTGATTGACCACATCCAGAGCGCGTCGCATGCGCGTCTCGAGTTTG
CAAACTGCAGTCAGCACTGGCTTGCAACTAATTCCACTTTTGTAGAATTC
CGATATGAACTGCTGCAGGAGCAATGGATATCTGGTCAGTCTTTGGATGG
GCTGAACTAGGAAGCTGTCGATGCCCCACTTGTCTTTTATTTGGGTTTGA
TATGTCTGCCACCACAGCCGATTATCCT

BS13037.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 21:19:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG15611-PB 1395 CG15611-RB 683..1395 728..16 3490 99.5 Minus
CG15611-PA 1527 CG15611-RA 815..1527 728..16 3490 99.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:06:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15611-RA 1759 CG15611-RA 964..1677 728..15 3525 99.6 Minus
CG15611-RB 1627 CG15611-RB 832..1545 728..15 3525 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17113823..17114278 470..15 2280 100 Minus
2R 25286936 2R 17113628..17113760 601..469 665 100 Minus
2R 25286936 2R 17113466..17113573 707..600 510 98.1 Minus
Blast to na_te.dros performed on 2015-02-10 18:06:53 has no hits.

BS13037.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:27 Download gff for BS13037.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15611-PA 815..1527 16..728 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:33:50 Download gff for BS13037.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15611-RB 832..1551 9..728 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:14:57 Download gff for BS13037.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15611-RB 832..1551 9..728 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:14:57 Download gff for BS13037.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17113468..17113572 601..705 98 -> Minus
2R 17113629..17113760 469..600 100 -> Minus
2R 17113382..17113404 706..728 95 -> Minus
2R 17113825..17114284 9..468 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:33:50 Download gff for BS13037.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13001134..13001265 469..600 100 -> Minus
arm_2R 13000887..13000909 706..728 95 -> Minus
arm_2R 13000973..13001077 601..705 98 -> Minus
arm_2R 13001330..13001789 9..468 99   Minus

BS13037.5prime Sequence

674 bp (670 high quality bases) assembled on 2006-10-13

> BS13037.5prime
GAAGTTATCAGTCGACATGGAGTTGTCATTGTTCACATTAAATTTGTTCG
ATGTGGTCTCGGTGGTGCTCACATTTCTTGTGATATTTCTAGTGCAAATT
CTTAACGTTTACTTGCATATACTCGACGATAATGCCGATAATGGCAAATC
GATCGATGTGGTGGACAAGGCACCAGCGAAAGAATGCCCGTTACTTGAGT
CCCAGTCACCCAGTTCACCAATCGCCACCACTCTACCGAAATCCCAGGCA
TCGAGCAACGGCAAGTTGGAGAAGCAAATAAGTCTGCTGGACAGCGATAG
CCACGAGGATGAGGACACATTGTCCTTGGAAAATCTGTTTCCCTGCGATC
AAACCGAGATCTATGCCTCCAAGAAGATCAGCTTCATAATCGACGAGCTC
ATCCAGACGGAGGTGAACTATGTGAACAATCTGAAGAAGGGTATGCTAAA
CTATGGACAGCTGAAGGATGTCGAGGATTTGCCAGAAGCCCTGAGTGGCG
AAACGAAACAAAAGATGCTGCTGGGAAACATTAAGGAAATACTGGAGCTG
CATGAGAAGGAGATACTGCCGCTCATGTTGCGCAATCAGCGGGATCTCAA
AGGTCTATTCGATGAATTTGCTGCTCACTTCGAGAAAAATAGCTTCTATT
GCTATGTGAGCTTCACTATGGGGA

BS13037.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 21:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15611-PB 1395 CG15611-RB 1..658 17..674 3265 99.8 Plus
CG15611-PA 1527 CG15611-RA 417..790 301..674 1845 99.7 Plus
CG15611-PA 1527 CG15611-RA 1..285 17..301 1425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15611-RB 1627 CG15611-RB 150..807 17..674 3275 99.8 Plus
CG15611-RA 1759 CG15611-RA 566..939 301..674 1855 99.7 Plus
CG15611-RA 1759 CG15611-RA 150..434 17..301 1425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17110165..17110500 299..634 1665 99.7 Plus
2R 25286936 2R 17108993..17109276 17..300 1420 100 Plus
2R 25286936 2R 17113316..17113357 633..674 210 100 Plus
Blast to na_te.dros performed on 2015-02-12 16:33:22 has no hits.

BS13037.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:28 Download gff for BS13037.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15611-PB 1..657 17..673 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:06:53 Download gff for BS13037.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15611-RB 140..806 7..673 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:41:13 Download gff for BS13037.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15611-RB 140..806 7..673 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:41:13 Download gff for BS13037.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17108983..17109276 7..300 98 -> Plus
2R 17110167..17110500 301..634 99 -> Plus
2R 17113318..17113356 635..673 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:06:53 Download gff for BS13037.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12996488..12996781 7..300 98 -> Plus
arm_2R 12997672..12998005 301..634 99 -> Plus
arm_2R 13000823..13000861 635..673 100   Plus

BS13037.pep Sequence

Translation from 16 to 1410

> BS13037.pep
MELSLFTLNLFDVVSVVLTFLVIFLVQILNVYLHILDDNADNGKSIDVVD
KAPAKECPLLESQSPSSPIATTLPKSQASSNGKLEKQISLLDSDSHEDED
TLSLENLFPCDQTEIYASKKISFIIDELIQTEVNYVNNLKKGMLNYGQLK
DVEDLPEALSGETKQKMLLGNIKEILELHEKEILPLMLRNQRDLKGLFDE
FAAHFEKNSFYCYVSFTMGKKSSMQLRQDNRLWLQTYQTQIKDKLGIDSF
LVQPIQRLTRYPLLLQQFISEFYKSGISCKPVLTAVCKLETRMRRALDVV
NQAEEIPNIEELNELDVLQLGNFRRATEFDAQHFPTRKKYRSKVFLFDRC
LVCTEVRKKRLAYRQHYNWEHVELQRPLDSVSSNANKIINLLVKQEEGGS
SVGSKREEYSFMAAEASVVKQWLQATHKIIEIARNEHARRNTFSLPMDLV
LGVVLAIWLIWQYL*

BS13037.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:57:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15611-PB 464 CG15611-PB 1..464 1..464 2367 100 Plus
CG15611-PA 508 CG15611-PA 1..508 1..464 2312 91.3 Plus
CG30456-PC 443 CG30456-PC 80..334 117..372 555 44.4 Plus
CG30456-PD 592 CG30456-PD 229..483 117..372 555 44.4 Plus
CG30456-PB 682 CG30456-PB 319..573 117..372 555 44.4 Plus