Clone Sequence Records
BS13045.3prime Sequence
641 bp (639 high quality bases) assembled on 2006-10-13
> BS13045.3prime
ATGGTCTAGAAAGCTTTTAGACGCGACGGAAGACCGAAGATGGCAGGTAG
GAGTTGTCGGGGCTCTGGGCGGCGGCCTGACGCACTGGAGCGGCGGAAGC
GAAGTTCAGGACGGGGGCAACACCACCGTTGTGGGCCTGGCTGGATCCTC
CCAGCTGGTCGTACTGACCCTGGATGGCGCGCTGGGCGTTGGCAGCGTCC
TCGGGAGTGCGGTACTTGACGAAGTGCACCTCGGGCTTGTTGTTGTTGTT
GCTGCGGATGGCGTTCAGCTTGTTGGCCAGATCTCCAATATCGGCCTGCT
TGTTCAGGACATAGATGGCGGTCTCCTGCTGGGCAGCCTGCTTGGCGAGG
GCCAGGGCGGCGTTCTCCAGGCCACGGTTCTCGGGTCCCTTGATGAAGAC
AACGCGCAGGGCCTTGTTCAGGGCAGAGGACACACGCTCCAGCTGCTGGG
GCTCATCGAAGTCCTGCTCGTTGGCGGTGAAGGTGAAGAACTCCTTCTCC
AGCTCGGCGGTTGGGGCAGGGGCGTTGTAGGAGACGGGGGCACTGAGGGC
GTCACCACCACCAATGCTTCCGATGCTGCCAATGCTTCCACCACCAATGC
TGCTCAGACCACCCAGACCGGCACCGCTTCCGATGCTGGCT
BS13045.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5468-PA | 867 | CG5468-RA | 243..867 | 641..17 | 3125 | 100 | Minus |
| CG6478-PA | 861 | CG6478-RA | 463..729 | 409..143 | 1110 | 96.6 | Minus |
| CG6447-PB | 840 | CG6447-RB | 445..684 | 409..170 | 950 | 95.8 | Minus |
| CG6447-PA | 858 | CG6447-RA | 463..702 | 409..170 | 950 | 95.8 | Minus |
| CG5476-PA | 930 | CG5476-RA | 535..765 | 400..170 | 930 | 96.1 | Minus |
| CG6460-PA | 744 | CG6460-RA | 346..611 | 406..141 | 830 | 92.4 | Minus |
| CG5471-PA | 924 | CG5471-RA | 454..678 | 406..182 | 800 | 94.2 | Minus |
| CG31080-PA | 726 | CG31080-RA | 391..530 | 346..207 | 425 | 92.1 | Minus |
| CG6452-PA | 690 | CG6452-RA | 268..399 | 406..275 | 410 | 92.4 | Minus |
| CG5480-PA | 852 | CG5480-RA | 394..460 | 370..304 | 210 | 92.5 | Minus |
| CG6447-PB | 840 | CG6447-RB | 356..404 | 498..450 | 195 | 95.9 | Minus |
| CG6447-PA | 858 | CG6447-RA | 374..422 | 498..450 | 195 | 95.9 | Minus |
| CG5476-PA | 930 | CG5476-RA | 437..488 | 498..447 | 185 | 94.2 | Minus |
| CG31080-PA | 726 | CG31080-RA | 317..377 | 420..360 | 180 | 91.8 | Minus |
| CG6478-PA | 861 | CG6478-RA | 374..422 | 498..450 | 170 | 93.8 | Minus |
| CG6452-PA | 690 | CG6452-RA | 442..504 | 232..170 | 165 | 90.4 | Minus |
| CG14243-PA | 771 | CG14243-RA | 505..539 | 232..198 | 150 | 97.1 | Minus |
| CG14240-PA | 663 | CG14240-RA | 423..456 | 245..212 | 145 | 97 | Minus |
| CG14243-PA | 771 | CG14243-RA | 391..428 | 346..309 | 140 | 94.7 | Minus |
| CG14250-PA | 738 | CG14250-RA | 486..518 | 239..207 | 140 | 96.9 | Minus |
| CG6447-PB | 840 | CG6447-RB | 715..761 | 139..93 | 135 | 91.4 | Minus |
| CG6447-PA | 858 | CG6447-RA | 733..779 | 139..93 | 135 | 91.4 | Minus |
| CG5476-PA | 930 | CG5476-RA | 847..893 | 88..42 | 135 | 91.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:52:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlM-RA | 1030 | CG5468-RA | 292..916 | 641..17 | 3125 | 100 | Minus |
| TwdlB-RA | 1025 | CG6478-RA | 384..895 | 535..24 | 1630 | 88.1 | Minus |
| TwdlN-RA | 1088 | CG5476-RA | 456..964 | 541..33 | 1585 | 87.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:52:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26619486..26620110 | 641..17 | 3125 | 100 | Minus |
| 3R | 32079331 | 3R | 26622581..26623092 | 24..535 | 1630 | 87.9 | Plus |
| 3R | 32079331 | 3R | 26632324..26632832 | 541..33 | 1570 | 87.2 | Minus |
| 3R | 32079331 | 3R | 26624691..26625202 | 24..535 | 1540 | 86.7 | Plus |
| 3R | 32079331 | 3R | 26628051..26628380 | 95..424 | 1140 | 89.7 | Plus |
| 3R | 32079331 | 3R | 26630292..26630621 | 424..95 | 1080 | 88.5 | Minus |
| 3R | 32079331 | 3R | 26634085..26634494 | 508..99 | 910 | 81.5 | Minus |
| 3R | 32079331 | 3R | 26626107..26626444 | 83..420 | 820 | 82.8 | Plus |
| 3R | 32079331 | 3R | 26620780..26621063 | 123..406 | 445 | 77.1 | Plus |
| 3R | 32079331 | 3R | 26656932..26657251 | 421..102 | 340 | 73.8 | Minus |
| 3R | 32079331 | 3R | 26640530..26640720 | 346..156 | 295 | 77 | Minus |
Blast to na_te.dros performed 2015-02-10 21:52:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2394..2432 | 275..237 | 123 | 79.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2790..2827 | 275..238 | 109 | 76.3 | Minus |
BS13045.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:33 Download gff for
BS13045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5468-PA | 243..867 | 17..641 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:08:33 Download gff for
BS13045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 292..916 | 17..641 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:47:15 Download gff for
BS13045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 292..916 | 17..641 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:47:15 Download gff for
BS13045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26619486..26620110 | 17..641 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:08:33 Download gff for
BS13045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22445208..22445832 | 17..641 | 100 | | Minus |
BS13045.5prime Sequence
713 bp (600 high quality bases) assembled on 2006-10-13
> BS13045.5prime
GAAGTTATCAGTCGACATGCGTGCCTTCATTGTTATGTGCTTGGTGGCAG
TCGCCTGCGCCGATAAGCTCGGCTACAACTACCAGCCCGTGGGACACTCC
AGCTCCGGACTGTCCTTTGCTCCTGGAAGTGGCAGCATTGGAGGTGGCTC
CATCGGAGGAGGCAGCATCGGAGGAGGCAGCATCGGAGGCGGCAGCATCG
GAGGCGGCAGCATCGGAGGCGGCAGCATCGGAGGATCCATTGGTGGTGGT
TCCATTGGAGCCAGCATCGGAAGCGGTGCCGGTCTGGGTGGTCTGAGCAG
CATTGGTGGTGGAAGCATTGGCAGCATCGGAAGCATTGGTGGTGGTGACG
CCCTCAGTGCCCCCGTCTCCTACAACGCCCCTGCCCCAACCGCCGAGCTG
GAGAAGGAGTTCTTCACCTTCACCGCCAACGAGCAGGACTTCGATGAGCC
CCAGCAGCTGGAGCGTGTGTCCTCTGCCCTGAACAAGGCCCTGCGCGTTG
TCTTCATCAAGGGACCCGAGAACCGTGGCCTGGAGAACGCCGCCCTGGCC
CTCGCCAAGCAGGCTGCCCAGCAGGAGACCGCCATCTATGTCCTGAACAA
GCAAGCCGATATTGGAGATCTGGGCAACAAGCTGAACGCCATCCGCAGCA
ACAACAACAACAAGCCCGAGGTGCACTTCGTCAAGTACCGCACTCCCGAG
GACGCTGCCACGC
BS13045.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5468-PA | 867 | CG5468-RA | 1..694 | 17..710 | 3420 | 99.7 | Plus |
| CG5471-PA | 924 | CG5471-RA | 454..670 | 494..710 | 710 | 93 | Plus |
| CG6460-PA | 744 | CG6460-RA | 346..562 | 494..710 | 660 | 92.1 | Plus |
| CG6447-PA | 858 | CG6447-RA | 1..143 | 17..159 | 565 | 95.8 | Plus |
| CG6447-PA | 858 | CG6447-RA | 463..593 | 491..621 | 555 | 96.9 | Plus |
| CG6447-PB | 840 | CG6447-RB | 445..575 | 491..621 | 555 | 96.9 | Plus |
| CG6478-PA | 861 | CG6478-RA | 463..593 | 491..621 | 555 | 96.9 | Plus |
| CG6447-PB | 840 | CG6447-RB | 1..125 | 35..159 | 550 | 97.6 | Plus |
| CG5476-PA | 930 | CG5476-RA | 535..656 | 500..621 | 535 | 97.5 | Plus |
| CG31080-PA | 726 | CG31080-RA | 391..530 | 554..693 | 425 | 92.1 | Plus |
| CG6452-PA | 690 | CG6452-RA | 268..397 | 494..623 | 375 | 91.5 | Plus |
| CG6478-PA | 861 | CG6478-RA | 604..682 | 632..710 | 345 | 97.4 | Plus |
| CG6478-PA | 861 | CG6478-RA | 25..110 | 41..126 | 330 | 95.3 | Plus |
| CG6447-PA | 858 | CG6447-RA | 604..682 | 632..710 | 320 | 96.2 | Plus |
| CG6447-PB | 840 | CG6447-RB | 586..664 | 632..710 | 320 | 96.2 | Plus |
| CG5476-PA | 930 | CG5476-RA | 667..745 | 632..710 | 320 | 96.2 | Plus |
| CG5476-PA | 930 | CG5476-RA | 35..110 | 51..126 | 230 | 92.1 | Plus |
| CG5480-PA | 852 | CG5480-RA | 394..460 | 530..596 | 210 | 92.5 | Plus |
| CG6447-PA | 858 | CG6447-RA | 374..422 | 402..450 | 195 | 95.9 | Plus |
| CG6447-PB | 840 | CG6447-RB | 356..404 | 402..450 | 195 | 95.9 | Plus |
| CG5476-PA | 930 | CG5476-RA | 437..488 | 402..453 | 185 | 94.2 | Plus |
| CG31080-PA | 726 | CG31080-RA | 317..377 | 480..540 | 180 | 91.8 | Plus |
| CG6478-PA | 861 | CG6478-RA | 374..422 | 402..450 | 170 | 93.8 | Plus |
| CG14243-PA | 771 | CG14243-RA | 505..539 | 668..702 | 150 | 97.1 | Plus |
| CG14240-PA | 663 | CG14240-RA | 423..456 | 655..688 | 145 | 97 | Plus |
| CG14243-PA | 771 | CG14243-RA | 391..428 | 554..591 | 140 | 94.7 | Plus |
| CG14250-PA | 738 | CG14250-RA | 486..518 | 661..693 | 140 | 96.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:26:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlM-RA | 1030 | CG5468-RA | 50..743 | 17..710 | 3440 | 99.7 | Plus |
| TwdlL-RA | 1002 | CG6447-RA | 51..732 | 17..710 | 1610 | 82.8 | Plus |
| TwdlL-RB | 1066 | CG6447-RB | 133..796 | 35..710 | 1565 | 82.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:26:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26619259..26619937 | 32..710 | 3365 | 99.7 | Plus |
| 3R | 32079331 | 3R | 26622747..26623092 | 710..365 | 1175 | 89.3 | Minus |
| 3R | 32079331 | 3R | 26624857..26625202 | 710..365 | 1175 | 89.3 | Minus |
| 3R | 32079331 | 3R | 26632324..26632675 | 359..710 | 1160 | 88.6 | Plus |
| 3R | 32079331 | 3R | 26630292..26630526 | 476..710 | 890 | 91.9 | Plus |
| 3R | 32079331 | 3R | 26628146..26628380 | 710..476 | 860 | 91.1 | Minus |
| 3R | 32079331 | 3R | 26634085..26634386 | 392..693 | 775 | 83.8 | Plus |
| 3R | 32079331 | 3R | 26625294..26625520 | 258..35 | 620 | 85.9 | Minus |
| 3R | 32079331 | 3R | 26626214..26626444 | 710..480 | 585 | 83.5 | Minus |
| 3R | 32079331 | 3R | 26623210..26623409 | 235..36 | 445 | 81.5 | Minus |
| 3R | 32079331 | 3R | 26631931..26632040 | 17..126 | 340 | 87.3 | Plus |
| 3R | 32079331 | 3R | 26620847..26621063 | 710..494 | 305 | 76 | Minus |
| 3R | 32079331 | 3R | 26656932..26657053 | 479..600 | 295 | 82.8 | Plus |
| 3R | 32079331 | 3R | 26640530..26640678 | 554..702 | 220 | 76.5 | Plus |
Blast to na_te.dros performed 2015-02-10 21:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2394..2432 | 625..663 | 123 | 79.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2789..2827 | 624..662 | 114 | 76.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2615..2657 | 621..663 | 107 | 72.1 | Plus |
BS13045.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:33 Download gff for
BS13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5468-PA | 1..698 | 17..713 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:29:33 Download gff for
BS13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 40..747 | 6..713 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:46:53 Download gff for
BS13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 40..747 | 6..713 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:46:53 Download gff for
BS13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26619259..26619941 | 32..713 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:29:33 Download gff for
BS13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22444981..22445663 | 32..713 | 99 | | Plus |
BS13045.complete Sequence
899 bp assembled on 2006-11-01
GenBank Submission: FJ637364
> BS13045.complete
GAAGTTATCAGTCGACATGCGTGCCTTCATTGTTATGTGCTTGGTGGCAG
TCGCCTGCGCCGATAAGCTCGGCTACAACTACCAGCCCGTGGGACACTCC
AGCTCCGGACTGTCCTTTGCTCCTGGAAGTGGCAGCATTGGAGGTGGCTC
CATCGGAGGAGGCAGCATCGGAGGAGGCAGCATCGGAGGCGGCAGCATCG
GAGGCGGCAGCATCGGAGGCGGCAGCATCGGAGGATCCATTGGTGGTGGT
TCCATTGGAGCCAGCATCGGAAGCGGTGCCGGTCTGGGTGGTCTGAGCAG
CATTGGTGGTGGAAGCATTGGCAGCATCGGAAGCATTGGTGGTGGTGACG
CCCTCAGTGCCCCCGTCTCCTACAACGCCCCTGCCCCAACCGCCGAGCTG
GAGAAGGAGTTCTTCACCTTCACCGCCAACGAGCAGGACTTCGATGAGCC
CCAGCAGCTGGAGCGTGTGTCCTCTGCCCTGAACAAGGCCCTGCGCGTTG
TCTTCATCAAGGGACCCGAGAACCGTGGCCTGGAGAACGCCGCCCTGGCC
CTCGCCAAGCAGGCTGCCCAGCAGGAGACCGCCATCTATGTCCTGAACAA
GCAGGCCGATATTGGAGATCTGGCCAACAAGCTGAACGCCATCCGCAGCA
ACAACAACAACAAGCCCGAGGTGCACTTCGTCAAGTACCGCACTCCCGAG
GACGCTGCCAACGCCCAGCGCGCCATCCAGGGTCAGTACGACCAGCTGGG
AGGATCCAGCCAGGCCCACAACGGTGGTGTTGCCCCCGTCCTGAACTTCG
CTTCCGCCGCTCCAGTGCGTCAGGCCGCCGCCCAGAGCCCCGACAACTCC
TACCTGCCATCTTCGGTCTTCCGTCGCGTCTAAAAGCTTTCTAGACCAT
BS13045.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlM-RA | 867 | CG5468-PA | 1..867 | 17..883 | 4335 | 100 | Plus |
| TwdlB-RA | 861 | CG6478-PA | 337..848 | 365..876 | 1630 | 87.9 | Plus |
| TwdlN-RA | 930 | CG5476-PA | 394..902 | 359..867 | 1570 | 87.2 | Plus |
| TwdlB-RA | 861 | CG6478-PA | 1..219 | 17..235 | 480 | 81.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlM-RA | 1030 | CG5468-RA | 50..916 | 17..883 | 4335 | 100 | Plus |
| TwdlB-RA | 1025 | CG6478-RA | 384..895 | 365..876 | 1630 | 87.9 | Plus |
| TwdlN-RA | 1088 | CG5476-RA | 456..964 | 359..867 | 1570 | 87.2 | Plus |
| TwdlB-RA | 1025 | CG6478-RA | 48..266 | 17..235 | 480 | 81.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26619259..26620110 | 32..883 | 4260 | 100 | Plus |
| 3R | 32079331 | 3R | 26622581..26623092 | 876..365 | 1630 | 87.9 | Minus |
| 3R | 32079331 | 3R | 26632324..26632832 | 359..867 | 1570 | 87.2 | Plus |
| 3R | 32079331 | 3R | 26624691..26625202 | 876..365 | 1540 | 86.7 | Minus |
| 3R | 32079331 | 3R | 26628051..26628380 | 805..476 | 1140 | 89.7 | Minus |
| 3R | 32079331 | 3R | 26630292..26630621 | 476..805 | 1080 | 88.5 | Plus |
| 3R | 32079331 | 3R | 26634085..26634494 | 392..801 | 910 | 81.5 | Plus |
| 3R | 32079331 | 3R | 26626107..26626444 | 817..480 | 820 | 82.8 | Minus |
| 3R | 32079331 | 3R | 26625294..26625520 | 258..35 | 620 | 85.9 | Minus |
| 3R | 32079331 | 3R | 26620780..26621063 | 777..494 | 445 | 77.1 | Minus |
| 3R | 32079331 | 3R | 26623210..26623409 | 235..36 | 445 | 81.5 | Minus |
| 3R | 32079331 | 3R | 26631931..26632040 | 17..126 | 340 | 87.3 | Plus |
| 3R | 32079331 | 3R | 26656932..26657251 | 479..798 | 340 | 73.8 | Plus |
| 3R | 32079331 | 3R | 26640530..26640720 | 554..744 | 295 | 77 | Plus |
Blast to na_te.dros performed 2014-11-28 01:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2394..2432 | 625..663 | 123 | 79.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2790..2827 | 625..662 | 109 | 76.3 | Plus |
BS13045.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:41:39 Download gff for
BS13045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 1..867 | 17..883 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:15:39 Download gff for
BS13045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 35..911 | 6..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:20 Download gff for
BS13045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 50..914 | 17..881 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:41:40 Download gff for
BS13045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 35..911 | 6..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:48:22 Download gff for
BS13045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlM-RA | 50..914 | 17..881 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:22 Download gff for
BS13045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26619259..26620108 | 32..881 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:20 Download gff for
BS13045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22444981..22445830 | 32..881 | 100 | | Plus |
BS13045.pep Sequence
Translation from 16 to 882
> BS13045.pep
MRAFIVMCLVAVACADKLGYNYQPVGHSSSGLSFAPGSGSIGGGSIGGGS
IGGGSIGGGSIGGGSIGGGSIGGSIGGGSIGASIGSGAGLGGLSSIGGGS
IGSIGSIGGGDALSAPVSYNAPAPTAELEKEFFTFTANEQDFDEPQQLER
VSSALNKALRVVFIKGPENRGLENAALALAKQAAQQETAIYVLNKQADIG
DLANKLNAIRSNNNNKPEVHFVKYRTPEDAANAQRAIQGQYDQLGGSSQA
HNGGVAPVLNFASAAPVRQAAAQSPDNSYLPSSVFRRV*
BS13045.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlM-PA | 288 | CG5468-PA | 1..288 | 1..288 | 1458 | 100 | Plus |
| TwdlL-PA | 285 | CG6447-PA | 1..283 | 1..287 | 1249 | 84.7 | Plus |
| TwdlB-PA | 286 | CG6478-PA | 1..284 | 1..288 | 1243 | 84.1 | Plus |
| TwdlL-PB | 279 | CG6447-PB | 1..277 | 7..287 | 1221 | 84.4 | Plus |
| TwdlN-PA | 309 | CG5476-PA | 1..305 | 1..288 | 1061 | 74.3 | Plus |
