Clone Sequence Records
BS13058.3prime Sequence
414 bp (414 high quality bases) assembled on 2006-10-13
> BS13058.3prime
ATGGTCTAGAAAGCTTTTATTTATATGTATATAAAATAAACATTTTTACA
TTGACGTATTTGTGGTTTGGTTGCACTTTGCTGTCATCCTGCATCTCAAC
GATTCGAGGAGTACCTTCGAGGACATTCTCTTCAATGTCCTCCAGTCTTA
ATGTGCTCAGTTCGCTGTAATCTTCTTCCTCTGAGAGATCTTCGTTGATG
GACTCATTCTTGACGTGGCATTGGAATCGCTCATCCTCGGTGGACTCTTG
CTCTGGCTGATGCACTTCAGTCTCATGGTTTGAATTCTCTCCTTCTCCGG
TGTCGACTTCTGCATCTCTTTCTGTTCCGAAATCGTTGCTACTTTCAAAT
TGATAAACTAGTTTCAAACTCCTCCATCTCGACTTGGAATTGCTGCTCAT
GTCGACTGATAACT
BS13058.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:34:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-PA | 384 | CG15345-RA | 1..384 | 400..17 | 1920 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 1085 | CG15345-RA | 401..784 | 400..17 | 1920 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:18:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8397458..8397841 | 17..400 | 1920 | 100 | Plus |
Blast to na_te.dros performed 2015-02-08 12:18:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1390..1462 | 10..82 | 113 | 65.3 | Plus |
BS13058.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:43 Download gff for
BS13058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-PA | 1..384 | 17..400 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:41:40 Download gff for
BS13058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 397..784 | 17..407 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:46:17 Download gff for
BS13058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 397..784 | 17..407 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:46:17 Download gff for
BS13058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397458..8397845 | 17..407 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:41:40 Download gff for
BS13058.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8291491..8291878 | 17..407 | 99 | | Plus |
BS13058.5prime Sequence
414 bp (414 high quality bases) assembled on 2006-10-13
> BS13058.5prime
GAAGTTATCAGTCGACATGAGCAGCAATTCCAAGTCGAGATGGAGGAGTT
TGAAACTAGTTTATCAATTTGAAAGTAGCAACGATTTCGGAACAGAAAGA
GATGCAGAAGTCGACACCGGAGAAGGAGAGAATTCAAACCATGAGACTGA
AGTGCATCAGCCAGAGCAAGAGTCCACCGAGGATGAGCGATTCCAATGCC
ACGTCAAGAATGAGTCCATCAACGAAGATCTCTCAGAGGAAGAAGATTAC
AGCGAACTGAGCACATTAAGACTGGAGGACATTGAAGAGAATGTCCTCGA
AGGTACTCCTCGAATCGTTGAGATGCAGGATGACAGCAAAGTGCAACCAA
ACCACAAATACGTCAATGTAAAAATGTTTATTTTATATACATATAAATAA
AAGCTTTCTAGACC
BS13058.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:34:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-PA | 384 | CG15345-RA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:14:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 1085 | CG15345-RA | 401..784 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:14:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8397458..8397841 | 400..17 | 1920 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 09:14:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1390..1462 | 407..335 | 113 | 65.3 | Minus |
BS13058.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:43 Download gff for
BS13058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-PA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:04:40 Download gff for
BS13058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 397..784 | 10..400 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:31:30 Download gff for
BS13058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 397..784 | 10..400 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:31:30 Download gff for
BS13058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397458..8397845 | 10..400 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:04:40 Download gff for
BS13058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8291491..8291878 | 10..400 | 99 | | Minus |
BS13058.complete Sequence
416 bp assembled on 2006-11-01
GenBank Submission: FJ637369
> BS13058.complete
GAAGTTATCAGTCGACATGAGCAGCAATTCCAAGTCGAGATGGAGGAGTT
TGAAACTAGTTTATCAATTTGAAAGTAGCAACGATTTCGGAACAGAAAGA
GATGCAGAAGTCGACACCGGAGAAGGAGAGAATTCAAACCATGAGACTGA
AGTGCATCAGCCAGAGCAAGAGTCCACCGAGGATGAGCGATTCCAATGCC
ACGTCAAGAATGAGTCCATCAACGAAGATCTCTCAGAGGAAGAAGATTAC
AGCGAACTGAGCACATTAAGACTGGAGGACATTGAAGAGAATGTCCTCGA
AGGTACTCCTCGAATCGTTGAGATGCAGGATGACAGCAAAGTGCAACCAA
ACCACAAATACGTCAATGTAAAAATGTTTATTTTATATACATATAAATAA
AAGCTTTCTAGACCAT
BS13058.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:30:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 384 | CG15345-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:30:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 1085 | CG15345-RA | 401..784 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:30:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8397458..8397841 | 400..17 | 1920 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 16:30:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1390..1462 | 407..335 | 113 | 65.3 | Minus |
BS13058.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:41:44 Download gff for
BS13058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:15:44 Download gff for
BS13058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 360..747 | 10..400 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:07 Download gff for
BS13058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 401..776 | 17..392 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:41:44 Download gff for
BS13058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 360..747 | 10..400 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:20:12 Download gff for
BS13058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 401..776 | 17..392 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:20:12 Download gff for
BS13058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397466..8397841 | 17..392 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:07 Download gff for
BS13058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8291499..8291874 | 17..392 | 100 | | Minus |
BS13058.pep Sequence
Translation from 16 to 399
> BS13058.pep
MSSNSKSRWRSLKLVYQFESSNDFGTERDAEVDTGEGENSNHETEVHQPE
QESTEDERFQCHVKNESINEDLSEEEDYSELSTLRLEDIEENVLEGTPRI
VEMQDDSKVQPNHKYVNVKMFILYTYK*
BS13058.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-PA | 127 | CG15345-PA | 1..127 | 1..127 | 663 | 100 | Plus |