Clone BS13067 Report

Search the DGRC for BS13067

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:130
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG10359-RG
Protein status:BS13067.pep: gold
Sequenced Size:16

Clone Sequence Records

BS13067.3prime Sequence

773 bp (694 high quality bases) assembled on 2006-10-13

> BS13067.3prime
ATGGTCTAGAAAGCTTCTATCGCCTGGCATCATCTATTCCTTCGGAAATG
GGACGAATCATCCAACGAACCCGTTTCAGCGAATTCTGCCCTGAAAAGGT
GTCCCACCAGATCCCAGTTTCTCCAGGTTGGTTCTGGGTGGTATATTCGC
CGAATAAGTTGCTCTTTGCGCAGTTGTTAAACCATCCAGCTCCCTTGTGT
CTCAGGGCGCAATTGCACTCCAGGCAGTTGTCATTATCCTGATCCACAGT
GCTAAACTTAGCTCCAGCATGATAGGACAATGAATCTCCAGCTGAAGGAG
TCAAATTATCCTGGAATTTGCCCAGCAAGACGAGTGGATATAGTTCCTTT
TCGCTGCCAATGGCAAACAACGAATATCCCGCATACGCCACGTTGCCCGA
GAAGTCCTCCATCACAATCCGCAGTTCGTGCAAGGCCGATGAAGTGAGGG
CATGCAGTTTGTTGAGACCAATAAAGAAGTCCCCAGCCAAATTGCCAAAG
CCATCGCGATAATCCAGCCAGCCGCGTTCGAAGTTCACATCATCGGAGGT
GCGGCTCAAAATAACAGTCCAATCCTCATCGCAGGATACGTAGAAGGATT
CCGATTCGGGTGTGAGCTGTACTTTTAGAATTCCGTGGTTAGAAAGGAAG
GAATAGGAGCAACTACTAGGCAACTGCCGTGTAGCTGTTGGTCCATTTAA
TCCACTTGGACCGTAAAAGATTGGCTGCTGACCTGGTGTCGACCTCAATC
CCTTACCCTGGATCAAACGGCTT

BS13067.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:34:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-PA 1383 CG10359-RA 627..1383 773..17 3760 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:45:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-RE 1762 CG10359-RE 835..1591 773..17 3770 99.9 Minus
CG10359-RG 1684 CG10359-RG 757..1513 773..17 3770 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:45:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3614317..3615073 773..17 3770 99.9 Minus
Blast to na_te.dros performed on 2015-02-11 17:45:26 has no hits.

BS13067.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:49 Download gff for BS13067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-PA 627..1383 17..773 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:25:12 Download gff for BS13067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 757..1523 5..773 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:28:58 Download gff for BS13067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 757..1523 5..773 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:28:58 Download gff for BS13067.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 3614317..3615083 5..773 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:25:12 Download gff for BS13067.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3614317..3615083 5..773 99   Minus

BS13067.5prime Sequence

748 bp (702 high quality bases) assembled on 2006-10-13

> BS13067.5prime
GAAGTTATCAGTCGACATGATGAGGCCCCAATTAGCGGCCATAGCCACTG
TCATGGTGCTGGCTGCGATCTGCGGTTTTGGCACTGGTTCCGTGCTGGAA
GTACCCGGAGTCACCCAGGCACCACCACTCCCACCTCGTAACCTCCGAAA
CAACCAAACGCGGTCGCGCATTCCCAACAACTTCCGAAGCATTGCGACCC
CACCAATTGCTCCCAGATGCGACTACAAGGAGCTGATGACCAATCTGCAC
GATCGCGTTGGCATCTTGGTGACCTTGGACGAGGACCAGCGCCACCGGCT
GGAAGTCATCGATAAGAAATTGGATCAGCTGGTGGAAAGCAGTTCGGCCC
GCATGGAATCGATGAAGGCCCAGCAATTGGACTTCCTGCACAGACTGGAC
AGTTTTGAGCACATCCAGCGGCTTTCGAGGAACACTCTAGATGAGCTTAA
AGATATCTCGCGCACTGTTCGTGACGTTTCCCAGGAACAGTATCCCAGCT
CGGGAATAGGTACATTTAATGAATCCAACTTGAATTTATCAAGTCGTCTG
GATGCCTTGGCCACGCTTTTGGCTTCTACTGCTCTCAGTGTCAGATCTGT
GCAGGTTGAAGTGGCCAATCTTTCACGGGCCATTAGGCGCCAAAGCCGTT
TGATCCAGGGTAAGGGATTGAGGTCGACACCAGGTCAGCAGCCCATCTTC
TACGGTCCAAGTGGATTAAATGGACCAACAGCTACACGGCAGTTGCCT

BS13067.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-PA 1383 CG10359-RA 1..732 17..748 3635 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-RG 1684 CG10359-RG 128..862 14..748 3660 99.9 Plus
CG10359-RE 1762 CG10359-RE 128..566 14..452 2195 100 Plus
CG10359-RE 1762 CG10359-RE 644..940 452..748 1470 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3614068..3614254 451..637 935 100 Plus
3L 28110227 3L 3612319..3612492 14..187 870 100 Plus
3L 28110227 3L 3613749..3613882 319..452 670 100 Plus
3L 28110227 3L 3613075..3613205 188..318 655 100 Plus
3L 28110227 3L 3614307..3614422 633..748 565 99.1 Plus
Blast to na_te.dros performed on 2015-02-12 17:55:59 has no hits.

BS13067.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:36:50 Download gff for BS13067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-PA 1..732 17..748 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:45:14 Download gff for BS13067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 125..862 10..748 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:52:46 Download gff for BS13067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 125..862 10..748 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:52:46 Download gff for BS13067.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3613075..3613205 188..318 100 -> Plus
3L 3613749..3613882 319..452 100 -> Plus
3L 3614070..3614253 453..636 100 -> Plus
3L 3614311..3614422 637..748 99   Plus
3L 3612316..3612492 10..187 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:45:14 Download gff for BS13067.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3612316..3612492 10..187 99 -> Plus
arm_3L 3613075..3613205 188..318 100 -> Plus
arm_3L 3613749..3613882 319..452 100 -> Plus
arm_3L 3614070..3614253 453..636 100 -> Plus
arm_3L 3614311..3614422 637..748 99   Plus

BS13067.complete Sequence

1415 bp assembled on 2006-11-01

> BS13067.complete
GAAGTTATCAGTCGACATGATGAGGCCCCAATTAGCGGCCATAGCCACTG
TCATGGTGCTGGCTGCGATCTGCGGTTTTGGCACTGGTTCCGTGCTGGAA
GTACCCGGAGTCACCCAGGCACCACCACTCCCACCTCGTAACCTCCGAAA
CAACCAAACGCGGTCGCGCATTCCCAACAACTTCCGAAGCATTGCGACCC
CACCAATTGCTCCCAGATGCGACTACAAGGAGCTGATGACCAATCTGCAC
GATCGCGTTGGCATCTTGGTGACCTTGGACGAGGACCAGCGCCACCGGCT
GGAAGTCATCGATAAGAAATTGGATCAGCTGGTGGAAAGCAGTTCGGCCC
GCATGGAATCGATGAAGGCCCAGCAATTGGACTTCCTGCACAGACTGGAC
AGTTTTGAGCACATCCAGCGGCTTTCGAGGAACACTCTAGATGAGCTTAA
AGATATCTCGCGCACTGTTCGTGACGTTTCCCAGGAACAGTATCCCAGCT
CGGGAATAGGTACATTTAATGAATCCAACTTGAATTTATCAAGTCGTCTG
GATGCCTTGGCCACGCTTTTGGCTTCTACTGCTCTCAGTGTCAGATCTGT
GCAGGTTGAAGTGGCCAATCTTTCACGGGCCATTAGGCGCCAAAGCCGTT
TGATCCAGGGTAAGGGATTGAGGTCGACACCAGGTCAGCAGCCAATCTTC
TACGGTCCAAGTGGATTAAATGGACCAACAGCTACACGGCAGTTGCCTAG
TAGTTGCTCCTATTCCTTCCTTTCTAACCACGGAATTCTAAAAGTACAGC
TCACACCCGAATCGGAATCCTTCTACGTATCCTGCGATGAGGATTGGACT
GTTATTTTGAGCCGCACCTCCGATGATGTGAACTTCGAACGCGGCTGGCT
GGATTATCGCGATGGCTTTGGCAATTTGGCTGGGGACTTCTTTATTGGTC
TCAACAAACTGCATGCCCTCACTTCATCGGCCTTGCACGAACTGCGGATT
GTGATGGAGGACTTCTCGGGCAACGTGGCGTATGCGGGATATTCGTTGTT
TGCCATTGGCAGCGAAAAGGAACTATATCCACTCGTCTTGCTGGGCAAAT
TCCAGGATAATTTGACTCCTTCAGCTGGAGATTCATTGTCCTATCATGCT
GGAGCTAAGTTTAGCACTGTGGATCAGGATAATGACAACTGCCTGGAGTG
CAATTGCGCCCTGAGACACAAGGGAGCTGGATGGTTTAACAACTGCGCAA
AGAGCAACTTATTCGGCGAATATACCACCCAGAACCAACCTGGAGAAACT
GGGATCTGGTGGGACACCTTTTCAGGGCAGAATTCGCTGAAACGGGTTCG
TTGGATGATTCGTCCCATTTCCGAAGGAATAGATGATGCCAGGCGATAGA
AGCTTTCTAGACCAT

BS13067.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-RG 1380 CG10359-PG 1..1380 20..1399 6900 100 Plus
CG10359-RE 1458 CG10359-PE 511..1458 452..1399 4740 100 Plus
CG10359-RE 1458 CG10359-PE 1..433 20..452 2165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-RG 1684 CG10359-RG 128..1513 14..1399 6930 100 Plus
CG10359-RE 1762 CG10359-RE 644..1591 452..1399 4740 100 Plus
CG10359-RE 1762 CG10359-RE 128..566 14..452 2195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3614307..3615073 633..1399 3835 100 Plus
3L 28110227 3L 3614068..3614254 451..637 935 100 Plus
3L 28110227 3L 3612319..3612492 14..187 870 100 Plus
3L 28110227 3L 3613749..3613882 319..452 670 100 Plus
3L 28110227 3L 3613075..3613205 188..318 655 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:09:19 has no hits.

BS13067.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:41:28 Download gff for BS13067.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 1..1380 20..1399 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:15:26 Download gff for BS13067.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 123..1521 10..1411 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:18:53 Download gff for BS13067.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 131..1513 17..1399 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:41:29 Download gff for BS13067.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 123..1521 10..1411 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:09 Download gff for BS13067.complete
Subject Subject Range Query Range Percent Splice Strand
CG10359-RG 131..1513 17..1399 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:09 Download gff for BS13067.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3612322..3612492 17..187 100 -> Plus
3L 3613075..3613205 188..318 100 -> Plus
3L 3613749..3613882 319..452 100 -> Plus
3L 3614070..3614253 453..636 100 -> Plus
3L 3614311..3615073 637..1399 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:18:53 Download gff for BS13067.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3612322..3612492 17..187 100 -> Plus
arm_3L 3613075..3613205 188..318 100 -> Plus
arm_3L 3613749..3613882 319..452 100 -> Plus
arm_3L 3614070..3614253 453..636 100 -> Plus
arm_3L 3614311..3615073 637..1399 100   Plus

BS13067.pep Sequence

Translation from 16 to 1398

> BS13067.pep
MMRPQLAAIATVMVLAAICGFGTGSVLEVPGVTQAPPLPPRNLRNNQTRS
RIPNNFRSIATPPIAPRCDYKELMTNLHDRVGILVTLDEDQRHRLEVIDK
KLDQLVESSSARMESMKAQQLDFLHRLDSFEHIQRLSRNTLDELKDISRT
VRDVSQEQYPSSGIGTFNESNLNLSSRLDALATLLASTALSVRSVQVEVA
NLSRAIRRQSRLIQGKGLRSTPGQQPIFYGPSGLNGPTATRQLPSSCSYS
FLSNHGILKVQLTPESESFYVSCDEDWTVILSRTSDDVNFERGWLDYRDG
FGNLAGDFFIGLNKLHALTSSALHELRIVMEDFSGNVAYAGYSLFAIGSE
KELYPLVLLGKFQDNLTPSAGDSLSYHAGAKFSTVDQDNDNCLECNCALR
HKGAGWFNNCAKSNLFGEYTTQNQPGETGIWWDTFSGQNSLKRVRWMIRP
ISEGIDDARR*

BS13067.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG10359-PG 459 CG10359-PG 1..459 2..460 2385 100 Plus
CG10359-PE 485 CG10359-PE 1..485 2..460 2348 94.6 Plus
CG1791-PC 333 CG1791-PC 54..332 185..453 413 38.9 Plus
CG1791-PA 334 CG1791-PA 54..333 185..453 412 38.8 Plus
CG9500-PA 272 CG9500-PA 33..266 219..450 396 40.9 Plus