Clone Sequence Records
BS13094.5prime Sequence
447 bp (447 high quality bases) assembled on 2006-10-13
> BS13094.5prime
GAAGTTATCAGTCGACATGTACATTTACCCCAGCTCACCGGAATCAGCAT
CGTCCTTGCAGTCCGAAGAGAGTGCGGCCATTAAGATTCAGGCCGGATTT
CGTGGCTACCGTGTGCGCAAAGAGATCCATCGATCCAGCAAGAATCCCCA
TCCCAGGCGGAATCAGCGACAGCGTCCAAAGAACAACGGCCTCATGGAAA
ACCAGAACAATACGGGAAATCCCCGTCCCAGCGGCGAGGATCAGCATACG
GCCACCGAGAATGGTGGTAAATCCGTGGAGGATCGTAGTGCCACCAAGAT
ACAGGCGGGATTCCGGGGATTCCTGGTGCGAAAGAAGCAGAAAATCGCCA
CCGATGCCGCTGTTAAAATTCAGGCTGGCTTCCGGGGATTCAAAACACGC
AAAGAATTGAAACAATGCGAGCCCATTGTGTAAAAGCTTTCTAGACC
BS13094.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:35:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14687-PA | 417 | CG14687-RA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:15:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14687-RA | 740 | CG14687-RA | 129..546 | 16..433 | 2090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:15:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10793032..10793449 | 16..433 | 2090 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:15:44 has no hits.
BS13094.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:37:10 Download gff for
BS13094.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-PA | 1..417 | 17..433 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:04:58 Download gff for
BS13094.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 121..553 | 9..440 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:33:36 Download gff for
BS13094.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 121..553 | 9..440 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:33:36 Download gff for
BS13094.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10793024..10793456 | 9..440 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:04:58 Download gff for
BS13094.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6618746..6619178 | 9..440 | 98 | | Plus |
BS13094.3prime Sequence
447 bp (447 high quality bases) assembled on 2006-10-13
> BS13094.3prime
ATGGTCTAGAAAGCTTTTACACAATGGGCTCGCATTGTTTCAATTCTTTG
CGTGTTTTGAATCCCCGGAAGCCAGCCTGAATTTTAACAGCGGCATCGGT
GGCGATTTTCTGCTTCTTTCGCACCAGGAATCCCCGGAATCCCGCCTGTA
TCTTGGTGGCACTACGATCCTCCACGGATTTACCACCATTCTCGGTGGCC
GTATGCTGATCCTCGCCGCTGGGACGGGGATTTCCCGTATTGTTCTGGTT
TTCCATGAGGCCGTTGTTCTTTGGACGCTGTCGCTGATTCCGCCTGGGAT
GGGGATTCTTGCTGGATCGATGGATCTCTTTGCGCACACGGTAGCCACGA
AATCCGGCCTGAATCTTAATGGCCGCACTCTCTTCGGACTGCAAGGACGA
TGCTGATTCCGGTGAGCTGGGGTAAATGTACATGTCGACTGATAACT
BS13094.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:35:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14687-PA | 417 | CG14687-RA | 1..417 | 433..17 | 2085 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:40:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14687-RA | 740 | CG14687-RA | 129..546 | 434..17 | 2090 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:39:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10793032..10793449 | 434..17 | 2090 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 10:40:02 has no hits.
BS13094.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:37:09 Download gff for
BS13094.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-PA | 1..417 | 17..433 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:44:01 Download gff for
BS13094.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 121..553 | 10..441 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:28:12 Download gff for
BS13094.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 121..553 | 10..441 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:28:12 Download gff for
BS13094.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10793024..10793456 | 10..441 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:44:01 Download gff for
BS13094.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6618746..6619178 | 10..441 | 98 | | Minus |
BS13094.complete Sequence
449 bp assembled on 2006-11-01
GenBank Submission: FJ637384
> BS13094.complete
GAAGTTATCAGTCGACATGTACATTTACCCCAGCTCACCGGAATCAGCAT
CGTCCTTGCAGTCCGAAGAGAGTGCGGCCATTAAGATTCAGGCCGGATTT
CGTGGCTACCGTGTGCGCAAAGAGATCCATCGATCCAGCAAGAATCCCCA
TCCCAGGCGGAATCAGCGACAGCGTCCAAAGAACAACGGCCTCATGGAAA
ACCAGAACAATACGGGAAATCCCCGTCCCAGCGGCGAGGATCAGCATACG
GCCACCGAGAATGGTGGTAAATCCGTGGAGGATCGTAGTGCCACCAAGAT
ACAGGCGGGATTCCGGGGATTCCTGGTGCGAAAGAAGCAGAAAATCGCCA
CCGATGCCGCTGTTAAAATTCAGGCTGGCTTCCGGGGATTCAAAACACGC
AAAGAATTGAAACAATGCGAGCCCATTGTGTAAAAGCTTTCTAGACCAT
BS13094.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:39:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14687-RA | 417 | CG14687-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:39:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14687-RA | 740 | CG14687-RA | 129..546 | 16..433 | 2090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:39:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10793032..10793449 | 16..433 | 2090 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:39:14 has no hits.
BS13094.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:41:10 Download gff for
BS13094.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 1..417 | 17..433 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:15:02 Download gff for
BS13094.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 119..551 | 9..440 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:50 Download gff for
BS13094.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 130..544 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:41:11 Download gff for
BS13094.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 119..551 | 9..440 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:01 Download gff for
BS13094.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14687-RA | 130..544 | 17..431 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:01 Download gff for
BS13094.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10793033..10793447 | 17..431 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:50 Download gff for
BS13094.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6618755..6619169 | 17..431 | 100 | | Plus |
BS13094.pep Sequence
Translation from 16 to 432
> BS13094.pep
MYIYPSSPESASSLQSEESAAIKIQAGFRGYRVRKEIHRSSKNPHPRRNQ
RQRPKNNGLMENQNNTGNPRPSGEDQHTATENGGKSVEDRSATKIQAGFR
GFLVRKKQKIATDAAVKIQAGFRGFKTRKELKQCEPIV*
BS13094.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14687-PA | 138 | CG14687-PA | 1..138 | 1..138 | 713 | 100 | Plus |