Clone Sequence Records
BS13258.3prime Sequence
508 bp (505 high quality bases) assembled on 2006-10-13
> BS13258.3prime
ATGGTCTAGAAAGCTTCTATTGCTCCAGATTTAATACGGGTTTCAATAAA
TTGATATACTTCTTCAAGCCCCGCAGATTGTCTTCCTCATAGTGGGGCAA
CTTAGAGAGTCGTTCGAACCAAGCAGCCACCTTTGGATACTTTAACTCAT
CCAGGTCAAGAACAGCGGCCAGCGAGGATGCAGTAGCTCCGCAGCATAAA
TCAGCTATGGTCAGTTGCGACCCGGTCAAATAGGGATTATCCCCTAGAAA
GTTCTCCAAATGGCCATATGCATCTTTAATGTTGTCCACCTTCTCCTTGG
GTACCAGGCTTACTTGGCGAAGAAAATAGGGTATACTGACATTTCGCAGC
GACATAAACAGAATGCTGGCATCAAAGAACAAACGCTGATCCACCTGGGC
GCGCAACACCAGATCCCTGGGATATAGCTCATCCGAATTGGCATACTTGT
CCACCAGGTAGCATACAATAGCATGTGAATCCCAGATAAGGGCACCATTA
TCTTCGAG
BS13258.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:36:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17523-PA | 666 | GstE2-RA | 175..666 | 508..17 | 2410 | 99.5 | Minus |
CG5164-PA | 675 | GstE1-RA | 230..277 | 456..409 | 165 | 93.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:40:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE2-RA | 890 | CG17523-RA | 213..704 | 508..17 | 2430 | 99.6 | Minus |
GstE1-RA | 831 | CG5164-RA | 217..359 | 508..366 | 250 | 78.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:40:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18399698..18400189 | 508..17 | 2430 | 99.6 | Minus |
2R | 25286936 | 2R | 18398609..18398751 | 508..366 | 250 | 78.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:40:05 has no hits.
BS13258.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:39:01 Download gff for
BS13258.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17523-PA | 175..666 | 17..508 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:27:20 Download gff for
BS13258.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 213..713 | 7..508 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:10:31 Download gff for
BS13258.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 213..713 | 7..508 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:10:31 Download gff for
BS13258.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18399698..18400198 | 7..508 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:27:20 Download gff for
BS13258.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14287203..14287703 | 7..508 | 98 | | Minus |
BS13258.5prime Sequence
586 bp (549 high quality bases) assembled on 2006-10-13
> BS13258.5prime
GAAGTTATCAGTCGACATGTCGGATAAATTGGTTTTGTATGGCATGGATA
TTAGTCCTCCTGTTCGCGCTTGCAAGCTGACCTTGCGGGCCTTAAACTTG
GACTACGAATACAAGGAAATGGATCTACTGGCAGGAGATCACTTTAAGGA
TGCGTTCCTCAAAAAGAACCCGCAGCACACCGTACCACTCCTCGAAGATA
ATGGTGCCCTTATCTGGGATTCACATGCTATTGTATGCTACCTGGTGGAC
AAGTATGCCAATTCGGATGAGCTATATCCCAGGGATCTGGTGTTGCGCGC
CCAGGTGGATCAGCGTTTGTTCTTTGATGCCAGCATTCTGTTTATGTCGC
TGCGAAATGTCAGTATACCCTATTTTCTTCGCCAAGTAAGCCTGGTACCC
AAGGAGAAGGTGGACAACATTAAAGATGCATATGGCCATTTGGAGAACTT
TCTAGGGGATAATCCCTATTTGACCGGGTCGCAACTGACCATAGCTGATT
TATGCTGCGGAGCTACTGCATCCTCGCTGGCCGCTGTTCTTGACCTGAAT
GAGTTAAAGTATCCCAAGGTGGCTGCTTGGTTCGAA
BS13258.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:36:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17523-PA | 666 | GstE2-RA | 1..570 | 17..586 | 2750 | 99.2 | Plus |
CG5164-PA | 675 | GstE1-RA | 230..277 | 243..290 | 165 | 93.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:07:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE2-RA | 890 | CG17523-RA | 38..608 | 16..586 | 2795 | 99.3 | Plus |
GstE1-RA | 831 | CG5164-RA | 125..359 | 99..333 | 290 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:07:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18399523..18400093 | 16..586 | 2795 | 99.3 | Plus |
2R | 25286936 | 2R | 18398517..18398751 | 99..333 | 290 | 74.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:07:04 has no hits.
BS13258.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:39:02 Download gff for
BS13258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17523-PA | 1..568 | 17..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:35:03 Download gff for
BS13258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 31..608 | 7..586 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:11:15 Download gff for
BS13258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 31..608 | 7..586 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:11:15 Download gff for
BS13258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18399516..18400093 | 7..586 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:35:03 Download gff for
BS13258.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14287021..14287598 | 7..586 | 98 | | Plus |
BS13258.complete Sequence
698 bp assembled on 2006-11-01
GenBank Submission: FJ637406
> BS13258.complete
GAAGTTATCAGTCGACATGTCGGATAAATTGGTTTTGTATGGCATGGATA
TTAGTCCTCCTGTTCGCGCTTGCAAGCTGACCTTGCGGGCCTTAAACTTG
GACTACGAATACAAGGAAATGGATCTACTGGCAGGAGATCACTTTAAGGA
TGCGTTCCTCAAAAAGAACCCGCAGCACACCGTACCACTCCTCGAAGATA
ATGGTGCCCTTATCTGGGATTCACATGCTATTGTATGCTACCTGGTGGAC
AAGTATGCCAATTCGGATGAGCTATATCCCAGGGATCTGGTGTTGCGCGC
CCAGGTGGATCAGCGTTTGTTCTTTGATGCCAGCATTCTGTTTATGTCGC
TGCGAAATGTCAGTATACCCTATTTTCTTCGCCAAGTAAGCCTGGTACCC
AAGGAGAAGGTGGACAACATTAAAGATGCATATGGCCATTTGGAGAACTT
TCTAGGGGATAATCCCTATTTGACCGGGTCGCAACTGACCATAGCTGATT
TATGCTGCGGAGCTACTGCATCCTCGCTGGCCGCTGTTCTTGACCTGGAT
GAGTTAAAGTATCCAAAGGTGGCTGCTTGGTTCGAACGACTCTCTAAGTT
GCCCCACTATGAGGAAGACAATCTGCGGGGCTTGAAGAAGTATATCAATT
TATTGAAACCCGTATTAAATCTGGAGCAATAGAAGCTTTCTAGACCAT
BS13258.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:14:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE2-RA | 666 | CG17523-PA | 1..666 | 17..682 | 3300 | 99.7 | Plus |
GstE1-RA | 675 | CG5164-PA | 86..320 | 99..333 | 290 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:14:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE2-RA | 890 | CG17523-RA | 38..704 | 16..682 | 3305 | 99.7 | Plus |
GstE1-RA | 831 | CG5164-RA | 125..359 | 99..333 | 290 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:14:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18399523..18400189 | 16..682 | 3305 | 99.7 | Plus |
2R | 25286936 | 2R | 18398517..18398751 | 99..333 | 290 | 74.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:14:08 has no hits.
BS13258.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:41:05 Download gff for
BS13258.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 1..666 | 17..682 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:14:54 Download gff for
BS13258.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 29..711 | 7..692 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:20:31 Download gff for
BS13258.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 39..704 | 17..682 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:41:05 Download gff for
BS13258.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 29..711 | 7..692 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:22 Download gff for
BS13258.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE2-RA | 39..704 | 17..682 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:22 Download gff for
BS13258.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18399524..18400189 | 17..682 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:20:31 Download gff for
BS13258.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14287029..14287694 | 17..682 | 99 | | Plus |
BS13258.pep Sequence
Translation from 16 to 681
> BS13258.pep
MSDKLVLYGMDISPPVRACKLTLRALNLDYEYKEMDLLAGDHFKDAFLKK
NPQHTVPLLEDNGALIWDSHAIVCYLVDKYANSDELYPRDLVLRAQVDQR
LFFDASILFMSLRNVSIPYFLRQVSLVPKEKVDNIKDAYGHLENFLGDNP
YLTGSQLTIADLCCGATASSLAAVLDLDELKYPKVAAWFERLSKLPHYEE
DNLRGLKKYINLLKPVLNLEQ*
BS13258.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE2-PA | 221 | CG17523-PA | 1..221 | 1..221 | 1152 | 100 | Plus |
GstE1-PA | 224 | CG5164-PA | 3..215 | 2..214 | 652 | 56.3 | Plus |
GstE7-PA | 223 | CG17531-PA | 3..214 | 4..214 | 582 | 51.4 | Plus |
GstE10-PB | 240 | CG17522-PB | 4..208 | 5..207 | 569 | 54.6 | Plus |
GstE10-PA | 240 | CG17522-PA | 4..208 | 5..207 | 569 | 54.6 | Plus |