Clone Sequence Records
BS13476.3prime Sequence
664 bp (615 high quality bases) assembled on 2006-10-13
> BS13476.3prime
ATGGTCTAGAAAGCTTTTAGGCCCACACCCGTATGGTGTAGTCCCAACTG
CCGGTGGATAGAGCGGTGCCATCGGGCGAGACCTGGACGCAGGACACCTT
GTTCTCGTGCCCGTACAGCAGGCAGACCCTTTCCGATTTCAGCGTGTCCC
ACAAGTTGACGGTGTAATCGTTGTAGCCAGCAAACAGTAATCTTCCACTG
ACCGAAAAGTCCACCGAATTGACGCCAAAGATGATGCTCTCCTTGGCGAA
CACGGCCACCTCGCGATCCGCTCGCATATCGTACAGCCGGCAGCTGCTGT
CATCCGATCCAGTGGCTATGGCATCTCCGCAAGGATGGAACTTAACGCTA
TTCACATCCGATTGATGACCCTCGAAGGACTGAACGACATGACCAGAGCG
CATGTCCCAGATGAAGGCCATGCGATCGCAACTGCCCGAGACAAAGGTGT
TGCCCGTTTCGTTGGGAGCCAAATCGATGGCCATTACATCGCCGGAATGT
CCGTGGAAGCTTTGCAGTAGCTGGCCCGATTCCACGTCCCACAAAGCGCA
TGTGGAATCGCCACTGCCCGTGAGGATTTGCTGATCGGAATTCGGATAGA
TGCAGCACGACATGTAGCTGGTGTGGGTGCCCACTGTGCGCTTCTTGGCG
GCCATCTCCTCATC
BS13476.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10763-PA | 1077 | Gbeta5-RA | 430..1077 | 664..17 | 3240 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:06:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-RA | 1545 | CG10763-RA | 562..1209 | 664..17 | 3240 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:06:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8151067..8151714 | 17..664 | 3240 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 10:06:50 has no hits.
BS13476.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:41:17 Download gff for
BS13476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10763-PA | 430..1077 | 17..664 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:33:12 Download gff for
BS13476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 562..1211 | 13..664 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:42:45 Download gff for
BS13476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 562..1211 | 13..664 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:42:45 Download gff for
BS13476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8151065..8151714 | 13..664 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:33:12 Download gff for
BS13476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8045098..8045747 | 13..664 | 99 | | Plus |
BS13476.5prime Sequence
723 bp (637 high quality bases) assembled on 2006-10-13
> BS13476.5prime
GAAGTTATCAGTCGACATGTCGGAGGCGGCGGTGCCAGCGAGCAATGCGA
ACGCGAATGCCACTGAAAAGATGGCCAGTTTGGTGCGAGAGGCGGAGAAT
TTGAAGACCAAACTGGAGGAGGAGCGCCAGAAGCTGAACGACGTCAATCT
GTCGAACATCGCAGAGCGGCTGGAGCAGATCGCCTATGTGAACATCAAGC
CGCGTAAGGTGCTCAAGGGCCACCAGGCGAAGGTCCTGTGCACCGACTGG
AGTCCCGACAAGCGTCACATCATCTCCTCGTCGCAGGACGGACGTCTGAT
CATCTGGGATGCGTTCACCACGAACAAGGAGCACGCCGTCACCATGCCCA
CCACCTGGATTATGGCCTGTGCCTACGCGCCGTCGGGCAATTTTGTGGCC
TGCGGCGGACTAGACAATAAGGTCACCGTGTATCCGATAACCTCCGATGA
GGAGATGGCCGCCAAGAAGCGCACAGTGGGCACCCACACCAGCTACATGT
CGTGCTGCATCTATCCGAATTCCGATCAGCAAATCCTCACGGGCAGTGGC
GATTCCACATGCGCTTTGTGGGACGTGGAATCGGGCCAGCTACTGCAAAG
CTTCCACGGACATTCCGGCGATGTAATGGCCATCGATTTGGCTCCCAACG
AAACGGGGCACACCTTTGTCTCGGGCAGTTGCGATCGCATGGCCTTCATC
TGGGACATGCGCTCTGGCCATGG
BS13476.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:39:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10763-PA | 1077 | Gbeta5-RA | 1..701 | 17..717 | 3455 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-RA | 1545 | CG10763-RA | 132..838 | 16..722 | 3490 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8151438..8152144 | 722..16 | 3490 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:06:57 has no hits.
BS13476.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:41:17 Download gff for
BS13476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10763-PA | 1..706 | 17..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:33:15 Download gff for
BS13476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 126..838 | 10..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:42:48 Download gff for
BS13476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 126..838 | 10..723 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:42:48 Download gff for
BS13476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8151437..8152150 | 10..723 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:33:15 Download gff for
BS13476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8045470..8046183 | 10..723 | 99 | | Minus |
BS13476.complete Sequence
1109 bp assembled on 2006-11-01
GenBank Submission: FJ638854
> BS13476.complete
GAAGTTATCAGTCGACATGTCGGAGGCGGCGGTGCCAGCGAGCAATGCGA
ACGCGAATGCCACTGAAAAGATGGCCAGTTTGGTGCGAGAGGCGGAGAAT
TTGAAGACCAAACTGGAGGAGGAGCGCCAGAAGCTGAACGACGTCAATCT
GTCGAACATCGCAGAGCGGCTGGAGCAGATCGCCTATGTGAACATCAAGC
CGCGTAAGGTGCTCAAGGGCCACCAGGCGAAGGTCCTGTGCACCGACTGG
AGTCCCGACAAGCGTCACATCATCTCCTCGTCGCAGGACGGACGTCTGAT
CATCTGGGATGCGTTCACCACGAACAAGGAGCACGCCGTCACCATGCCCA
CCACCTGGATTATGGCCTGTGCCTACGCGCCGTCGGGCAATTTTGTGGCC
TGCGGCGGACTAGACAATAAGGTCACCGTGTATCCGATAACCTCCGATGA
GGAGATGGCCGCCAAGAAGCGCACAGTGGGCACCCACACCAGCTACATGT
CGTGCTGCATCTATCCGAATTCCGATCAGCAAATCCTCACGGGCAGTGGC
GATTCCACATGCGCTTTGTGGGACGTGGAATCGGGCCAGCTACTGCAAAG
CTTCCACGGACATTCCGGCGATGTAATGGCCATCGATTTGGCTCCCAACG
AAACGGGCAACACCTTTGTCTCGGGCAGTTGCGATCGCATGGCCTTCATC
TGGGACATGCGCTCTGGTCATGTCGTTCAGTCCTTCGAGGGTCATCAATC
GGATGTGAATAGCGTTAAGTTCCATCCTTGCGGAGATGCCATAGCCACTG
GATCGGATGACAGCAGCTGCCGGCTGTACGATATGCGAGCGGATCGCGAG
GTGGCCGTGTTCGCCAAGGAGAGCATCATCTTTGGCGTCAATTCGGTGGA
CTTTTCGGTCAGTGGAAGATTACTGTTTGCTGGCTACAACGATTACACCG
TCAACTTGTGGGACACGCTGAAATCGGAAAGGGTCTGCCTGCTGTACGGG
CACGAGAACAAGGTGTCCTGCGTCCAGGTCTCGCCCGATGGCACCGCTCT
ATCCACCGGCAGTTGGGACTACACCATACGGGTGTGGGCCTAAAAGCTTT
CTAGACCAT
BS13476.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-RA | 1077 | CG10763-PA | 1..1077 | 17..1093 | 5385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:29:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-RA | 1545 | CG10763-RA | 132..1209 | 16..1093 | 5390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:29:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8151067..8152144 | 1093..16 | 5390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:29:24 has no hits.
BS13476.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:39:56 Download gff for
BS13476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 1..1077 | 17..1093 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:13:31 Download gff for
BS13476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 129..1214 | 10..1097 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:11 Download gff for
BS13476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 133..1207 | 17..1091 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:39:56 Download gff for
BS13476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 129..1214 | 10..1097 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:26:34 Download gff for
BS13476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta5-RA | 133..1207 | 17..1091 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:26:34 Download gff for
BS13476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8151069..8152143 | 17..1091 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:11 Download gff for
BS13476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8045102..8046176 | 17..1091 | 100 | | Minus |
BS13476.pep Sequence
Translation from 16 to 1092
> BS13476.pep
MSEAAVPASNANANATEKMASLVREAENLKTKLEEERQKLNDVNLSNIAE
RLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAF
TTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAK
KRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHS
GDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSV
KFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSG
RLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSW
DYTIRVWA*
BS13476.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta5-PA | 358 | CG10763-PA | 1..358 | 1..358 | 1894 | 100 | Plus |
| Gbeta13F-PH | 340 | CG10545-PH | 3..339 | 18..357 | 932 | 49.4 | Plus |
| Gbeta13F-PG | 340 | CG10545-PG | 3..339 | 18..357 | 932 | 49.4 | Plus |
| Gbeta13F-PF | 340 | CG10545-PF | 3..339 | 18..357 | 932 | 49.4 | Plus |
| Gbeta13F-PE | 340 | CG10545-PE | 3..339 | 18..357 | 932 | 49.4 | Plus |
