Clone Sequence Records
BS13483.3prime Sequence
516 bp (516 high quality bases) assembled on 2006-10-13
> BS13483.3prime
ATGGTCTAGAAAGCTTCTAAACATATCTGCTGGCGATGGCCAGAACCTTG
GTGTAATCGGCTCCTTTGGCCAGCGTCTTCTCCTTGAGGATGGTTCGCAG
GATCGTGGGAATGGGCACATGGATGCGAGTGCCCAGCGGACTGCCATTGT
CGTCGATGAGCACCAGGTTGTTGCTATCGAATTTCGGCTGTTTGGGCTTC
TGGTTCTGCTTGAGTCCCACGAGAATGCCCTTCTTCATCTGTCCCTTGAT
GGCCACCAGCACCTTATCGCCAATGAAGCCGACTCCGCGTTTGTTGTAGA
CATGGATGCACCTCGGTGGTCGCCCCTCGGCCATCGCTTTCTTTCCCAAA
TCGCTGTTGTCCACCACCCGTAACCGGGCCAATTTCCGGATTTCGCAGCA
CGCCGGCGTTGTGTGAATCAATTGCTGTGTTTGCTGGCCGCCCAGGGTTA
CCGCCAGTGGTTGGGCCACTTGTCTAACTGTTTTCAGGATGCGCAGCGCC
ATGTCGACTGATAACT
BS13483.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:39:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14048-PA | 486 | mRpL14-RA | 1..486 | 502..17 | 2430 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:14:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 597 | CG14048-RB | 59..544 | 502..17 | 2430 | 100 | Minus |
| mRpL14-RA | 653 | CG14048-RA | 115..600 | 502..17 | 2430 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:14:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2344050..2344535 | 17..502 | 2430 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 10:14:21 has no hits.
BS13483.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:41:22 Download gff for
BS13483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14048-PA | 1..486 | 17..502 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:39:23 Download gff for
BS13483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..600 | 17..502 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:24:49 Download gff for
BS13483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..600 | 17..502 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:24:49 Download gff for
BS13483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2344050..2344535 | 17..502 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:39:23 Download gff for
BS13483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2238083..2238568 | 17..502 | 100 | | Plus |
BS13483.5prime Sequence
516 bp (516 high quality bases) assembled on 2006-10-13
> BS13483.5prime
GAAGTTATCAGTCGACATGGCGCTGCGCATCCTGAAAACAGTTAGACAAG
TGGCCCAACCACTGGCGGTAACCCTGGGCGGCCAGCAAACACAGCAATTG
ATTCACACAACGCCGGCGTGCTGCGAAATCCGGAAATTGGCCCGGTTACG
GGTGGTGGACAACAGCGATTTGGGAAAGAAAGCGATGGCCGAGGGGCGAC
CACCGAGGTGCATCCATGTCTACAACAAACGCGGAGTCGGCTTCATTGGC
GATAAGGTGCTGGTGGCCATCAAGGGACAGATGAAGAAGGGCATTCTCGT
GGGACTCAAGCAGAACCAGAAGCCCAAACAGCCGAAATTCGATAGCAACA
ACCTGGTGCTCATCGACGACAATGGCAGTCCGCTGGGCACTCGCATCCAT
GTGCCCATTCCCACGATCCTGCGAACCATCCTCAAGGAGAAGACGCTGGC
CAAAGGAGCCGATTACACCAAGGTTCTGGCCATCGCCAGCAGATATGTTT
AGAAGCTTTCTAGACC
BS13483.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:39:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14048-PA | 486 | mRpL14-RA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:43:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 597 | CG14048-RB | 59..544 | 17..502 | 2430 | 100 | Plus |
| mRpL14-RA | 653 | CG14048-RA | 115..600 | 17..502 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:43:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2344050..2344535 | 502..17 | 2430 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 17:43:19 has no hits.
BS13483.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:41:22 Download gff for
BS13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14048-PA | 1..486 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:49:33 Download gff for
BS13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..600 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:04:28 Download gff for
BS13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..600 | 17..502 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:04:28 Download gff for
BS13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2344050..2344535 | 17..502 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:49:33 Download gff for
BS13483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2238083..2238568 | 17..502 | 100 | | Minus |
BS13483.complete Sequence
518 bp assembled on 2006-11-01
GenBank Submission: FJ637475
> BS13483.complete
GAAGTTATCAGTCGACATGGCGCTGCGCATCCTGAAAACAGTTAGACAAG
TGGCCCAACCACTGGCGGTAACCCTGGGCGGCCAGCAAACACAGCAATTG
ATTCACACAACGCCGGCGTGCTGCGAAATCCGGAAATTGGCCCGGTTACG
GGTGGTGGACAACAGCGATTTGGGAAAGAAAGCGATGGCCGAGGGGCGAC
CACCGAGGTGCATCCATGTCTACAACAAACGCGGAGTCGGCTTCATTGGC
GATAAGGTGCTGGTGGCCATCAAGGGACAGATGAAGAAGGGCATTCTCGT
GGGACTCAAGCAGAACCAGAAGCCCAAACAGCCGAAATTCGATAGCAACA
ACCTGGTGCTCATCGACGACAATGGCAGTCCGCTGGGCACTCGCATCCAT
GTGCCCATTCCCACGATCCTGCGAACCATCCTCAAGGAGAAGACGCTGGC
CAAAGGAGCCGATTACACCAAGGTTCTGGCCATCGCCAGCAGATATGTTT
AGAAGCTTTCTAGACCAT
BS13483.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:40:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 486 | CG14048-PB | 1..486 | 17..502 | 2430 | 100 | Plus |
| mRpL14-RA | 486 | CG14048-PA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:40:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 597 | CG14048-RB | 59..544 | 17..502 | 2430 | 100 | Plus |
| mRpL14-RA | 653 | CG14048-RA | 115..600 | 17..502 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:40:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2344050..2344535 | 502..17 | 2430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:40:06 has no hits.
BS13483.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:40:00 Download gff for
BS13483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 1..486 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:13:37 Download gff for
BS13483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 103..588 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:26 Download gff for
BS13483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..600 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:40:01 Download gff for
BS13483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 103..588 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:24 Download gff for
BS13483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 115..600 | 17..502 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:24 Download gff for
BS13483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2344050..2344535 | 17..502 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:26 Download gff for
BS13483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2238083..2238568 | 17..502 | 100 | | Minus |
BS13483.pep Sequence
Translation from 16 to 501
> BS13483.pep
MALRILKTVRQVAQPLAVTLGGQQTQQLIHTTPACCEIRKLARLRVVDNS
DLGKKAMAEGRPPRCIHVYNKRGVGFIGDKVLVAIKGQMKKGILVGLKQN
QKPKQPKFDSNNLVLIDDNGSPLGTRIHVPIPTILRTILKEKTLAKGADY
TKVLAIASRYV*
BS13483.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:23:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-PB | 161 | CG14048-PB | 1..161 | 1..161 | 817 | 100 | Plus |
| mRpL14-PA | 161 | CG14048-PA | 1..161 | 1..161 | 817 | 100 | Plus |
