BS13524.complete Sequence
431 bp assembled on 2010-07-02
GenBank Submission: KX806238
> BS13524.complete
GAAGTTATCAGTCGACATGAAAGTATTCTTTGTGTTTGCCGCCCTTGCAG
CTCTATCTTTGGCATCTGCCGTGGGGCTAACTGATTCCCAAAAGGCTGAG
GCAAAGCAGAGAGCCAAGGCCTGCGTCAAACAGGAGGGAATCACGAAGGA
GCAAGCTATTGCCCTGCGGTCTGGAAACTTTGCAGACTCCGATCCAAAGG
TAAAGTGCTTCGCCAACTGCTTCCTGGAGCAGACCGGCCTGGTGGCCAAT
GGGCAGATAAAACCTGACGTGGTTTTGGCCAAACTAGGTCCCATCGCCGG
CGAAGCCAATGTCAAGGAGGTGCAGGCCAAGTGTGACTCGACCAAGGGAG
CCGACAAGTGCGACACTAGCTATCTGCTGTACAAGTGCTACTACGAAAAC
CACGCCCAATTCTAAAAGCTTTCTAGACCAT
BS13524.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56e-RA | 399 | CG8462-PA | 1..399 | 17..415 | 1995 | 100 | Plus |
| Obp56e-RB | 396 | CG8462-PB | 1..396 | 17..415 | 1915 | 99.2 | Plus |
| Obp56d-RB | 396 | CG11218-PB | 112..396 | 131..415 | 255 | 72.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56e-RA | 532 | CG8462-RA | 52..451 | 16..415 | 2000 | 100 | Plus |
| Obp56e-RB | 529 | CG8462-RB | 52..448 | 16..415 | 1920 | 99.2 | Plus |
| Obp56d-RB | 922 | CG11218-RB | 277..561 | 131..415 | 255 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19712509..19712851 | 73..415 | 1715 | 100 | Plus |
| 2R | 25286936 | 2R | 19712396..19712454 | 16..74 | 295 | 100 | Plus |
| 2R | 25286936 | 2R | 19703285..19703569 | 415..131 | 255 | 72.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:21:26 has no hits.
BS13524.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:24:56 Download gff for
BS13524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56e-RA | 53..449 | 17..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:23 Download gff for
BS13524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56e-RA | 53..449 | 17..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:28 Download gff for
BS13524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56e-RA | 53..449 | 17..413 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:28 Download gff for
BS13524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19712397..19712453 | 17..73 | 100 | -> | Plus |
| 2R | 19712510..19712849 | 74..413 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:23 Download gff for
BS13524.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15600015..15600354 | 74..413 | 100 | | Plus |
| arm_2R | 15599902..15599958 | 17..73 | 100 | -> | Plus |
BS13524.pep Sequence
Translation from 16 to 414
> BS13524.pep
MKVFFVFAALAALSLASAVGLTDSQKAEAKQRAKACVKQEGITKEQAIAL
RSGNFADSDPKVKCFANCFLEQTGLVANGQIKPDVVLAKLGPIAGEANVK
EVQAKCDSTKGADKCDTSYLLYKCYYENHAQF*
BS13524.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:34:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56e-PA | 132 | CG8462-PA | 1..132 | 1..132 | 675 | 100 | Plus |
| Obp56e-PB | 131 | CG8462-PB | 1..131 | 1..132 | 659 | 99.2 | Plus |
| Obp56d-PB | 131 | CG11218-PB | 1..129 | 1..130 | 439 | 63.8 | Plus |
| Obp56d-PA | 131 | CG11218-PA | 1..129 | 1..130 | 439 | 63.8 | Plus |
| Obp56a-PA | 139 | CG11797-PA | 1..128 | 1..125 | 245 | 37.5 | Plus |
