BS13592.complete Sequence
716 bp assembled on 2010-07-02
GenBank Submission: KX805290
> BS13592.complete
GAAGTTATCAGTCGACATGAAAGCCGTGATCTTTGTGCTCGCCGTCGTGG
TAGCCATGGCCGGAAAAGCCCACGCCGCATGCTCCGCCGTTCCTCAATAT
ACGGAAAAGATCGATCCTGTCAATTGCCCACAGTCAGGATTCAAGTTGCC
CAACTATGAGAACGCCTCCGTGTACTACCAGTGCACCGCACAGTTACAGT
CCGATGGCAGCATAGTGGTGACTGGCGTCTTGACCAGCTGCGGTGAAGAC
ACCTACTTCAACTATGCCTTGCAGAGATGCGTGGCCTGCGCCAATTACTT
CCCAAGCGCCCAGTGCAGCAGTCTGCCCATCAATGTGACCTGTGTGCCCA
TCTCCACCGTTACCACTGTGGCCCCCACAACCGGAACCACCATTGCTCCC
ACCACCGCGTCCCCCACTACCGCTGCTTCCACCACTGCGGCACCTGGCGA
GTCCACCACTGCAGCACCTGGCGAGTCTACCACCGTCACGGTGCCCGTAC
CACCAACTGAAGCTCCTGGCAGCACCACGGCCTCCGGCAGTGACGACATC
ATTACCCCGACTGGTACCACCATCTCCGTGCCCCAGCCCCCCTCACCCAG
TGACAGCAACGTGCCCACTCCGGTGACGCCCGCGCCCACAGCTCCTGTCA
TCAACGACGGTCCTCCGACCGCACCTTCGGCTGCCACCAAATAAAAGCTT
TCTAGACCATTCGTGG
BS13592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:19:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7714-RA | 678 | CG7714-PA | 1..678 | 17..694 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:19:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7714-RA | 953 | CG7714-RA | 81..760 | 15..694 | 3400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:19:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18725592..18726260 | 694..26 | 3345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:19:20 has no hits.
BS13592.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:24:38 Download gff for
BS13592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7714-RA | 83..762 | 17..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:33 Download gff for
BS13592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7714-RA | 83..762 | 17..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:44 Download gff for
BS13592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7714-RA | 83..762 | 17..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:44 Download gff for
BS13592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18725586..18726263 | 20..700 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:33 Download gff for
BS13592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14551308..14551985 | 20..700 | 98 | | Minus |
BS13592.pep Sequence
Translation from 16 to 693
> BS13592.pep
MKAVIFVLAVVVAMAGKAHAACSAVPQYTEKIDPVNCPQSGFKLPNYENA
SVYYQCTAQLQSDGSIVVTGVLTSCGEDTYFNYALQRCVACANYFPSAQC
SSLPINVTCVPISTVTTVAPTTGTTIAPTTASPTTAASTTAAPGESTTAA
PGESTTVTVPVPPTEAPGSTTASGSDDIITPTGTTISVPQPPSPSDSNVP
TPVTPAPTAPVINDGPPTAPSAATK*
BS13592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7714-PA | 225 | CG7714-PA | 1..225 | 1..225 | 1172 | 100 | Plus |
| CG34220-PA | 726 | CG34220-PA | 142..261 | 108..223 | 170 | 36.2 | Plus |
| CG34220-PA | 726 | CG34220-PA | 317..434 | 108..224 | 170 | 35.2 | Plus |
| Muc55B-PB | 485 | CG5765-PB | 127..338 | 47..222 | 168 | 34 | Plus |
| Muc55B-PA | 485 | CG5765-PA | 127..338 | 47..222 | 168 | 34 | Plus |
| Muc26B-PA | 471 | CG13990-PA | 130..280 | 56..208 | 161 | 32.7 | Plus |
| CG34220-PA | 726 | CG34220-PA | 133..241 | 108..218 | 160 | 35.1 | Plus |
| CG34220-PA | 726 | CG34220-PA | 430..532 | 111..224 | 160 | 35.9 | Plus |
| CG34220-PA | 726 | CG34220-PA | 275..413 | 96..223 | 158 | 31.7 | Plus |
| Muc55B-PB | 485 | CG5765-PB | 253..380 | 96..222 | 158 | 37.8 | Plus |
| Muc55B-PB | 485 | CG5765-PB | 258..394 | 96..222 | 158 | 37.3 | Plus |
| Muc55B-PA | 485 | CG5765-PA | 253..380 | 96..222 | 158 | 37.8 | Plus |
| Muc55B-PA | 485 | CG5765-PA | 258..394 | 96..222 | 158 | 37.3 | Plus |
| Muc55B-PB | 485 | CG5765-PB | 304..424 | 107..224 | 157 | 38.9 | Plus |
| Muc55B-PA | 485 | CG5765-PA | 304..424 | 107..224 | 157 | 38.9 | Plus |
| CG34220-PA | 726 | CG34220-PA | 6..229 | 5..221 | 156 | 26.3 | Plus |
| Muc55B-PB | 485 | CG5765-PB | 290..408 | 107..222 | 155 | 39.5 | Plus |
| Muc55B-PA | 485 | CG5765-PA | 290..408 | 107..222 | 155 | 39.5 | Plus |
| Muc55B-PB | 485 | CG5765-PB | 318..438 | 107..221 | 148 | 38.9 | Plus |
| Muc55B-PA | 485 | CG5765-PA | 318..438 | 107..221 | 148 | 38.9 | Plus |
