Clone Sequence Records
BS13622.complete Sequence
2384 bp assembled on 2009-12-07
GenBank Submission: KX805075
> BS13622.complete
GAAGTTATCAGTCGACATGGCTCAACGAACACATAGATATATATGTTTGG
CGGGTTCCATGGTGCGAAACTTTCACACGGCGCGTTTTCCACGATGTGAT
AAAGTGGCAATGTCAAATTTTGATACCGGAATTCCCTTGCCCTATAAGAA
GTTGAGGGAAAACCTGGATTGCATCAAGGGTCGACTGGGTGGACCGCTAA
CCTTGTCGGAGAAGGTGTTATATTCCCATTTGGATCAACCGGATTCACAG
GAAATCGAACGAGGCAAGTCCTATTTGCGATTGCGACCAGATCGCGTTGC
CCTGCAGGATGCGACTGCCCAGATGACGCTACTGCAGTTCATTTCGTCGG
GCCTGAAGAAGGTAGCAGTTCCATCCACCGTCCACTGTGATCACTTAATT
GAGGCCCAGATCAGTGGCGATAAGGACTTGGCCAGGGCTAAGGATCTGAA
CAAGGAGGTGTACGATTTTCTGTCCTCGGCGTGTGCCAAGTATAACTTGG
GTTTCTGGAAGCCTGGCAGCGGCATAATTCATCAGATCATTTTAGAGAAC
TATGCATTTCCCGGACTACTGATGATCGGAACTGATTCCCATACTCCGAA
TGGCGGCGGACTGGGTTGCCTGTGCGTTGGAGTTGGTGGTGCAGATGCCG
TCGATGTGATGGCGAATATACCGTGGGAACTCAAGTGCCCGACCGTGATT
GGATGCCATCTCACGGGTAAGATCAGTGGGTGGACTTCGCCCAAGGATGT
CATCCTTAAAGTGGCCGAGATTCTGACCGTTAAAGGAGGTACGGGTGCCA
TTGTGGAGTACCATGGTCCTGGTGTCGAATCTATTTCCTGCACAGGCATG
GCTACTATTACCAACATGGGTGCTGAAATCGGTGCCACAACTTCAATATT
TCCATTCAACGAACGCATGGTCACATATTTGCGTGCAACCGGTAGAGGTG
CCATCGCTGATGAGGCCACAAAGAATAAAGATCTTTTGGTTCCGGATGAG
GGTTGCAAATACGATAAGGTGATCGAGATCAATTTGGACACCTTGGAACC
GCTGGTGAATGGCCCCTTCACTCCCGATTTGGCCCATCCCATTAGTAAAC
TGGGTCAGAACTCCGAGAAGAATGGCTATCCGATGGAAATCAAAGTGAGT
CTAATTGGTTCCTGCACGAACTCCTCCTACGAGGACATGGGACGATGTGC
CAGCATAGCCAATGACGCACTGGGTCATGGCCTAAAATCGTGCGTTCCAT
TTAATGTTACCCCGGGATCGGAGCAAGTTCGAGCTACAATCGCACGGGAC
GGCATTATAGATGTGCTTGAGAAGTTTGGAGGCACCGTGCTGGCGAATGC
CTGTGGTCCCTGCATTGGACAGTGGGATCGCAAGGATGTAAAGATGGGAG
AGAAGAACACCATTGTCACGTCGTATAATCGCAACTTCACCGGTCGAAAT
GATGCCAATCCAGCAACACATTGTTTTGTTACGAGTCCAGAAATGGCAAC
TGCATTGGCTATCGCCGGACGTTTGGATTTCAATCCGATGACGGATGAGC
TTACGGGTACCGATGGCAAAACGTTCAAGCTCAAGGAACCGCACGGCGAA
GAGCTGCCATCCAAGGGTTTTGATCCCGGAGAGGATACCTATCAGGCTCC
CCCAGCGAAAGCAGATGATATCAAGGTCAATGTCGATCCCAAGTCGGATC
GCCTGCAACTGCTCGAACCTTTTGAGAAATGGGACGGCAAGGACTACATT
GATTTGATGGTGCTTATCAAAATCAAAGGCAAATGCACCACCGATCACAT
CAGTGCCGCTGGACCCTGGCTTAAGTATCGCGGTCATTTGGATAATATAT
CAAATAACATGTTCATTGGGGCAACAAATGCCGAAAACAATGAAATGAAC
AAGGTCAAAAACCAGAAGACAGGCAGTTTTGACGCCGTACCAGCGGTGGC
ACGCGATTACAAGGCCAACAAGATCAAGTGGTGTGCTGTGGGTGAGGAGA
ACTACGGCGAGGGATCATCCAGGGAGCACGCTGCCCTGGAACCTCGACAC
TTGGGCGGAGTGGCCATTATCGTCAAGTCGTTCGCCCGCATCCACGAGAC
GAACCTAAAGAAACAGGGTATGCTCGCCTTGACATTCGCCAATCCCGGTG
ACTACGACAAAGTTCAGCCGTCGAGCAAGATTTCGATACTGAACCTCAAG
GACTTGGCACCTGGCAAGCCTGTGGATGCTGAGATCAAGAATAATGGTAG
CTCCGACAAAATCCAGTTGAACCACACCCTTAATGAGCTGCAGATCCAGT
GGTTCCAGGCTGGAAGTGCCTTGAATCTAATGAAGGAGCTTGCCGCCAAG
GGTGGCGATAAGAAATAGAAGCTTTCTAGACCAT
BS13622.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:05:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2352 | CG4706-PA | 1..2352 | 17..2368 | 11685 | 99.8 | Plus |
| Acon-RF | 2364 | CG9244-PF | 1024..2358 | 1010..2344 | 1545 | 74.4 | Plus |
| Acon-RE | 2364 | CG9244-PE | 1024..2358 | 1010..2344 | 1545 | 74.4 | Plus |
| Acon-RF | 2364 | CG9244-PF | 301..931 | 290..920 | 1055 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:05:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2566 | CG4706-RA | 76..2427 | 17..2368 | 11685 | 99.8 | Plus |
| Acon-RF | 3102 | CG9244-RF | 1226..2560 | 1010..2344 | 1545 | 74.4 | Plus |
| Acon-RE | 3022 | CG9244-RE | 1145..2479 | 1010..2344 | 1545 | 74.4 | Plus |
| Acon-RF | 3102 | CG9244-RF | 503..1133 | 290..920 | 1055 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11137252..11139603 | 17..2368 | 11685 | 99.8 | Plus |
| 2L | 23513712 | 2L | 21170458..21171088 | 290..920 | 1055 | 77.8 | Plus |
| 2L | 23513712 | 2L | 21171181..21171825 | 1010..1654 | 930 | 76.3 | Plus |
| 2L | 23513712 | 2L | 21171908..21172401 | 1671..2164 | 595 | 74.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:05:24 has no hits.
BS13622.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:29 Download gff for
BS13622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 76..2421 | 17..2362 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:05:39 Download gff for
BS13622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 76..2421 | 17..2362 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:05:13 Download gff for
BS13622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 76..2421 | 17..2362 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:03:46 Download gff for
BS13622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 76..2421 | 17..2362 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:46 Download gff for
BS13622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11137252..11139597 | 17..2362 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:05:39 Download gff for
BS13622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6962974..6965319 | 17..2362 | 99 | | Plus |
BS13622.3prime Sequence
685 bp (617 high quality bases) assembled on 2006-10-13
> BS13622.3prime
ATGGTCTAGAAAGCTTCTATTTCTTATCGCCACCCTTGGCGGCAAGCTCC
TTCATTAGATTCAAGGCACTTCCAGCCTGGAACCACTGGATCTGCAGCTC
ATTAAGGGTGTGGTTCAACTGGATTTTGTCGGAGCTACCATTATTCTTGA
TCTCAGCATCCACAGGCTTGCCAGGTGCCAAGTCCTTGAGGTTCAGTATC
GAAATCTTGCTCGACGGCTGAACTTTGTCGTAGTCACCGGGATTGGCGAA
TGTCAAGGCGAGCATACCCTGTTTCTTTAGGTTCGTCTCGTGGATGCGGG
CGAACGACTTGACGATAATGGCCACTCCGCCCAAGTGTCGAGGTTCCAGG
GCAGCGTGCTCCCTGGATGATCCCTCGCCGTAGTTCTCCTCACCCACAGC
ACACCACTTGATCTTGTTGGCCTTGTAATCGCGTGCCACCGCTGGTACGG
CGTCAAAACTGCCTGTCTTCTGGTTTTTGACCTTGTTCATTTCATTGTTT
TCGGCATTTGTTGCCCCAATGAACATGTTATTTGATATATTATCCAAATG
ACCGCGATACTTAAGCCAGGGTCCAGCGGCACTGATGTGATCGGTGGTGC
ATTTGCCTTTGATTTTGATAAGCACCATCAAATCAATGTAGTCCTTGCCG
TCCCATTTCTCAAAAGGTTCGAGCAGTTGCAGGCG
BS13622.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:25:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-PA | 2352 | CG4706-RA | 1684..2352 | 685..17 | 3320 | 99.8 | Minus |
| CG9244-PB | 2364 | Acon-RB | 2077..2133 | 322..266 | 185 | 92.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:00:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2566 | CG4706-RA | 1759..2427 | 685..17 | 3330 | 99.9 | Minus |
| Acon-RF | 3102 | CG9244-RF | 1919..2560 | 682..41 | 645 | 74.5 | Minus |
| Acon-RE | 3022 | CG9244-RE | 1838..2479 | 682..41 | 645 | 74.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:00:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11138935..11139603 | 685..17 | 3330 | 99.9 | Minus |
| 2L | 23513712 | 2L | 21171940..21172401 | 682..221 | 555 | 74.7 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:00:16 has no hits.
BS13622.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:42:27 Download gff for
BS13622.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-PA | 1684..2352 | 17..685 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:35:19 Download gff for
BS13622.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 1759..2431 | 12..685 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:09:56 Download gff for
BS13622.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 1759..2431 | 12..685 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:09:56 Download gff for
BS13622.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11138935..11139602 | 18..685 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:35:19 Download gff for
BS13622.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6964657..6965324 | 18..685 | 99 | -> | Minus |
BS13622.5prime Sequence
679 bp (636 high quality bases) assembled on 2006-10-13
> BS13622.5prime
GAAGTTATCAGTCGACATGGCTCAACGAACACATAGATATATATGTTTGG
CGGGTTCCATGGTGCGAAACTTTCACACGGCGCGTTTTCCACGATGTGAT
AAAGTGGCAATGTCAAATTTTGATACCGGAATTCCCTTGCCCTATAAGAA
GTTGAGGGAAAACCTGGATTGCATCAAGGGTCGACTGGGTGGACCGCTAA
CCTTGTCGGAGAAGGTGTTATATTCCCATTTGGATCAACCGGATTCACAG
GAAATCGAACGAGGCAAGTCCTATTTGCGATTGCGACCAGATCGCGTTGC
CCTGCAGGATGCGACTGCCCAGATGACGCTACTGCAGTTCATTTCGTCGG
GCCTGAAGAAGGTAGCAGTTCCATCCACCGTCCACTGTGATCACTTAATT
GAGGCCCAGATCAGTGGCGATAAGGACTTGGCCAGGGCTAAGGATCTGAA
CAAGGAGGTGTACGATTTTCTGTCCTCGGCGTGTGCCAAGTATAACTTGG
GTTTCTGGAAGCCTGGCAGCGGCATAATTCATCAGATCATTTTAGAGAAC
TATGCATTTCCCGGACTACTGATGATCGGAACTGATTCCCATACTCCGAA
TGGCGGCGGACTGGGTTGCCTGTGCGTTGGAGTTGGTGGTGCAGATGCCG
TCGATGTGATGGCGAATATACCGTGGGAA
BS13622.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-PA | 2352 | CG4706-RA | 1..663 | 17..679 | 3240 | 99.5 | Plus |
| CG9244-PB | 2364 | Acon-RB | 623..674 | 612..663 | 160 | 92.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:50:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2566 | CG4706-RA | 76..738 | 17..679 | 3270 | 99.5 | Plus |
| Acon-RF | 3102 | CG9244-RF | 503..876 | 290..663 | 700 | 79.1 | Plus |
| Acon-RE | 3022 | CG9244-RE | 422..795 | 290..663 | 700 | 79.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:50:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11137252..11137914 | 17..679 | 3270 | 99.5 | Plus |
| 2L | 23513712 | 2L | 21170458..21170831 | 290..663 | 700 | 79.1 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:50:34 has no hits.
BS13622.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:42:27 Download gff for
BS13622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-PA | 1..661 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:40:01 Download gff for
BS13622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 69..738 | 9..679 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:53:28 Download gff for
BS13622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 69..738 | 9..679 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:53:28 Download gff for
BS13622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11137245..11137914 | 9..679 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:40:01 Download gff for
BS13622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6962967..6963636 | 9..679 | 99 | | Plus |
BS13622.pep Sequence
Translation from 16 to 2367
> BS13622.pep
MAQRTHRYICLAGSMVRNFHTARFPRCDKVAMSNFDTGIPLPYKKLRENL
DCIKGRLGGPLTLSEKVLYSHLDQPDSQEIERGKSYLRLRPDRVALQDAT
AQMTLLQFISSGLKKVAVPSTVHCDHLIEAQISGDKDLARAKDLNKEVYD
FLSSACAKYNLGFWKPGSGIIHQIILENYAFPGLLMIGTDSHTPNGGGLG
CLCVGVGGADAVDVMANIPWELKCPTVIGCHLTGKISGWTSPKDVILKVA
EILTVKGGTGAIVEYHGPGVESISCTGMATITNMGAEIGATTSIFPFNER
MVTYLRATGRGAIADEATKNKDLLVPDEGCKYDKVIEINLDTLEPLVNGP
FTPDLAHPISKLGQNSEKNGYPMEIKVSLIGSCTNSSYEDMGRCASIAND
ALGHGLKSCVPFNVTPGSEQVRATIARDGIIDVLEKFGGTVLANACGPCI
GQWDRKDVKMGEKNTIVTSYNRNFTGRNDANPATHCFVTSPEMATALAIA
GRLDFNPMTDELTGTDGKTFKLKEPHGEELPSKGFDPGEDTYQAPPAKAD
DIKVNVDPKSDRLQLLEPFEKWDGKDYIDLMVLIKIKGKCTTDHISAAGP
WLKYRGHLDNISNNMFIGATNAENNEMNKVKNQKTGSFDAVPAVARDYKA
NKIKWCAVGEENYGEGSSREHAALEPRHLGGVAIIVKSFARIHETNLKKQ
GMLALTFANPGDYDKVQPSSKISILNLKDLAPGKPVDAEIKNNGSSDKIQ
LNHTLNELQIQWFQAGSALNLMKELAAKGGDKK*
BS13622.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-PA | 783 | CG4706-PA | 1..783 | 1..783 | 4138 | 100 | Plus |
| Acon-PF | 787 | CG9244-PF | 14..786 | 4..776 | 3285 | 79.3 | Plus |
| Acon-PE | 787 | CG9244-PE | 14..786 | 4..776 | 3285 | 79.3 | Plus |
| Acon-PD | 787 | CG9244-PD | 14..786 | 4..776 | 3285 | 79.3 | Plus |
| Acon-PB | 787 | CG9244-PB | 14..786 | 4..776 | 3285 | 79.3 | Plus |
