Clone BS13632 Report

Search the DGRC for BS13632

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:136
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptS-RA
Protein status:BS13632.pep: full length peptide match
Sequenced Size:1826

Clone Sequence Records

BS13632.complete Sequence

1826 bp assembled on 2009-12-07

GenBank Submission: KX804549

> BS13632.complete
GAAGTTATCAGTCGACATGTCGCAGCAAGTGTTCTCGGCGCATCCAGCGC
TGGCGGTGGACCAGCTGCAGCAGGCGGAACAAGAGGAGCACAATACCAGT
AGTAATCATCACCAGCAGAGATCGGCGACACAGAGCCGCCGGCATACCAA
GGCCGCACCCAAGAAGTTCACCCTGAGCAGGAGTTGCGCCGGCGGAGGAT
CGGGAACCCTGAGCGGAGTCCACCAGCAAGTCAAGCCCAGTCCTTCAAAC
CCCGCCATCAGTCCGGAGTGCAGGAAAACACTGCCCGTGCGAACAAACTA
TGCGGCGGTGGATGACGACGATGACATCGAGTGCGAGGATGTGGACGAGG
TGAACTTTGGCCAGCAGGAGAAGGAGCGGGAGCGGGAGACCCGGCAACCA
ACCAAAGACTGTGGCACCGATGAGACGGATCATGTGCAGCAGCGCCACAA
AAACACAATGACGACCTCGGCGACGGCGGCGAGCAGGCACCACCACCAGG
ACGGAGGAGGAGGTGACCAGAGCGATCTGAGCAGCGTGATCAGCTCGCCG
TCGGTCAGCACAGTGTCCTCGCCCCTCTCCACGCCCACCAGGCTGCCACA
GGCGCTGCAACAGCAGCTACACTGCTGCCAGAAGTCCACGGGCATGGAGT
CCCGGGCGAGAACATCTCCGCAACAGATCCAGCATCCGCACAGACAGCAC
CACCAGCAGCAGCACCATCACCACCACCACCATCACCACCTCACGGCAGC
GGGTTGTACGGGCGGAGGAGGAGGAGGCGGTGGCTCTGGAGGATCGGGAT
CCTGCAAGGCGAAGAAGCTCGATCCCCGACTGAATCCCTCGCCCTATCGC
CAGCTATTGCCCATCGCCCTGTGCCTGCTCTCCTTCGCGGCAGTCTTCGC
CACATTAATAGTTTACATGGACACGACAGAGATTCGCCATCAGCAGTTTC
GGCTAAACATGTCGCGCGACTACGAGCTGAATGGGGTTGCGCAAGACGAT
CCCGCACTCATTGATTTCCTGCGCCAGATCCACATGGGCAAGTACCTGGG
CAAGGCGTCGCCCAAGGTCGCGGCAGCGGCCTCAGTGGGCGTGGGTCCGC
CGCCCAACTCGCCGCGCCTCGCCGCCGCAGGCTCAACATTCGGTAGTGGC
AACAGCAGCGGCAGTGGAGCCGATCAACTGGCCCACTACGTGGCCGACCT
AGTGGGCGGCAAGATGAACGGCGCGGTGATCCAGTCGCTGAGCGGTCCTC
TCGCCCATCTGATCACGGCGCCCTGGCTGAGCGAGCAGCTCAACTGGATG
GGCGTGCTGGTGGAGCCGGAGCCGCGCTGGTACTTCACGTTGCGCAAGCA
GAATGCCCAGCGGGCGCGCATGCAGGTGGTGCACGCCTGTGTTTCGCCCA
ATACCTATCCCAAAGAGATTACCATACACAACGAGGATGTGCGCATCAAT
AGTCTGCACGACGAGGAGACCTCGTGGTTCAACTCGCGTGTCAAATGCTT
TCCGCTCTACACAATCATGCTGGCATGTGAGCGCACCGAATACGATCTGC
TCAGCCTGGGCGTACAGGGGCATGAGCTGGAGATCTTGCAGACGCTGCCC
TTCGACAAAGTCAAAATCGATGTGATATCGATACATTTGCTCGAGGATCA
CGAGGACGTGGCCGATTACGTGCTGGACATCACCAGGTTCCTGGCGGGCA
AGTCCTATAAGCTGCAGCGCAAGATCGGTCGGAACTACTTCTACCAGCGG
CTCAATGCCAGCGCCAGTCGCACGCGCAAAAAAGATATCCTGCTGCTGAA
GACGCCCTAGAAGCTTTCTAGACCAT

BS13632.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
S-RA 1794 CG4385-PA 1..1794 17..1810 8955 99.9 Plus
S-RB 1794 CG4385-PB 1..1794 17..1810 8955 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
S-RA 2267 CG4385-RA 227..2021 16..1810 8960 99.9 Plus
S-RB 5206 CG4385-RB 1048..2842 16..1810 8960 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1061234..1062147 929..16 4570 100 Minus
2L 23513712 2L 1052566..1053056 1417..927 2440 99.8 Minus
2L 23513712 2L 1052038..1052267 1810..1581 1150 100 Minus
2L 23513712 2L 1052331..1052497 1582..1416 835 100 Minus
Blast to na_te.dros performed 2014-11-28 01:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2510 592..752 151 58.8 Plus

BS13632.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:15:50 Download gff for BS13632.complete
Subject Subject Range Query Range Percent Splice Strand
S-RA 1..1794 17..1810 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:16 Download gff for BS13632.complete
Subject Subject Range Query Range Percent Splice Strand
S-RA 228..2021 17..1810 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:54:00 Download gff for BS13632.complete
Subject Subject Range Query Range Percent Splice Strand
S-RB 1049..2842 17..1810 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:46:14 Download gff for BS13632.complete
Subject Subject Range Query Range Percent Splice Strand
S-RA 228..2021 17..1810 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:52 Download gff for BS13632.complete
Subject Subject Range Query Range Percent Splice Strand
S-RB 1049..2842 17..1810 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:52 Download gff for BS13632.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1052038..1052265 1583..1810 100 <- Minus
2L 1052331..1052495 1418..1582 100 <- Minus
2L 1052566..1053053 930..1417 99 <- Minus
2L 1061234..1062146 17..929 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:54:00 Download gff for BS13632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1052038..1052265 1583..1810 100 <- Minus
arm_2L 1052331..1052495 1418..1582 100 <- Minus
arm_2L 1052566..1053053 930..1417 99 <- Minus
arm_2L 1061234..1062146 17..929 100   Minus

BS13632.3prime Sequence

758 bp (686 high quality bases) assembled on 2006-10-13

> BS13632.3prime
ATGGTCTAGAAAGCTTCTAGGGCGTCTTCAGCAGCAGGATATCTTTTTTG
CGCGTGCGACTGGCGCTGGCATTGAGCCGCTGGTAGAAGTAGTTCCGACC
GATCTTGCGCTGCAGCTTATAGGACTTGCCCGCCAGGAACCTGGTGATGT
CCAGCACGTAATCGGCCACGTCCTCGTGATCCTCGAGCAAATGTATCGAT
ATCACATCGATTTTGACTTTGTCGAAGGGCAGCGTCTGCAAGATCTCCAG
CTCATGCCCCTGTACGCCCAGGCTGAGCAGATCGTATTCGGTGCGCTCAC
ATGCCAGCATGATTGTGTAGAGCGGAAAGCATTTGACACGCGAGTTGAAC
CACGAGGTCTCCTCGTCGTGCAGACTATTGATGCGCACATCCTCGTTGTG
TATGGTAATCTCTTTGGGATAGGTATTGGGCGAAACACAGGCGTGCACCA
CCTGCATGCGCGCCCGCTGGGCATTCTGCTTGCGCAACGTGAAGTACCAG
CGCGGCTCCGGCTCCACCAGCACGCCCATCCAGTTGAGCTGCTCGCTCAG
CCAGGGCGCCGTGATCAGATGGGCGAGAGGACCGCTCAGCGACTGGATCA
CCGCGCCGTTCATCTTGCCGCCCACTAGGTCGGCCACGTAGTGGGCCAGT
TGATCGGCTCCACTGCCGCTGCTGTTGCCACTACCGAATGTTGAGCCTGC
GGCGGCGAGGCGCGGCGAGTTGGGCGGCGGACCCACGCCCACTGAGGCCG
CTGCCGCG

BS13632.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:26:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG4385-PB 1794 S-RB 1053..1794 758..17 3685 99.8 Minus
CG4385-PA 1794 S-RA 1053..1794 758..17 3685 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
S-RA 2267 CG4385-RA 1280..2021 758..17 3695 99.9 Minus
S-RB 5206 CG4385-RB 2101..2842 758..17 3695 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:16:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1052566..1052914 410..758 1730 99.7 Plus
2L 23513712 2L 1052038..1052267 17..246 1150 100 Plus
2L 23513712 2L 1052331..1052497 245..411 835 100 Plus
Blast to na_te.dros performed on 2015-02-13 07:16:18 has no hits.

BS13632.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:42:31 Download gff for BS13632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4385-PA 1053..1794 17..758 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:41:57 Download gff for BS13632.3prime
Subject Subject Range Query Range Percent Splice Strand
S-RB 2101..2845 12..758 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:25:58 Download gff for BS13632.3prime
Subject Subject Range Query Range Percent Splice Strand
S-RB 2101..2845 12..758 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:25:58 Download gff for BS13632.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 1052331..1052495 245..409 100 <- Plus
2L 1052566..1052914 410..758 99   Plus
2L 1052035..1052265 12..244 99 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:41:57 Download gff for BS13632.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1052035..1052265 12..244 99 <- Plus
arm_2L 1052331..1052495 245..409 100 <- Plus
arm_2L 1052566..1052914 410..758 99   Plus

BS13632.5prime Sequence

723 bp (626 high quality bases) assembled on 2006-10-13

> BS13632.5prime
GAAGTTATCAGTCGACATGTCGCAGCAAGTGTTCTCGGCGCATCCAGCGC
TGGCGGTGGACCAGCTGCAGCAGGCGGAACAAGAGGAGCACAATACCAGT
AGTAATCATCACCAGCAGAGATCGGCGACACAGAGCCGCCGGCATACCAA
GGCCGCACCCAAGAAGTTCACCCTGAGCAGGAGTTGCGCCGGCGGAGGAT
CGGGAACCCTGAGCGGAGTCCACCAGCAAGTCAAGCCCAGTCCTTCAAAC
CCCGCCATCAGTCCGGAGTGCAGGAAAACACTGCCCGTGCGAACAAACTA
TGCGGCGGTGGATGACGACGATGACATCGAGTGCGAGGATGTGGACGAGG
TGAACTTTGGCCAGCAGGAGAAGGAGCGGGAGCGGGAGACCCGGCAACCA
ACCAAAGACTGTGGCACCGATGAGACGGATCATGTGCAGCAGCGCCACAA
AAACACAATGACGACCTCGGCGACGGCGGCGAGCAGGCACCACCACCAGG
ACGGAGGAGGAGGTGACCAGAGCGATCTGAGCAGCGTGATCAGCTCGCCG
TCGGTCAGCACAGTGTCCTCGCCCCTCTCCACGCCCACCAGGCTGCCACA
GGCGCTGCAACAGCAGCTACACTGCTGCCAGAAGTCCACGGGCATGGAGT
CCCGGGCGAGAACATCTCCGCAACAGATCCAGCATCCGCACAGACAGCAC
CACCAGCAGCAGCACCATCACCA

BS13632.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG4385-PB 1794 S-RB 1..707 17..723 3535 100 Plus
CG4385-PA 1794 S-RA 1..707 17..723 3535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
S-RA 2267 CG4385-RA 227..934 16..723 3540 100 Plus
S-RB 5206 CG4385-RB 1048..1755 16..723 3540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1061440..1062147 723..16 3540 100 Minus
Blast to na_te.dros performed 2015-02-13 06:57:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6727..6795 656..723 153 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6748..6816 656..723 153 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2274..2374 624..723 142 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6790..6923 592..722 141 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2363..2428 656..723 137 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6870 592..723 135 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1576 668..723 134 74.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2280..2653 353..723 133 54.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6774 671..723 130 71.7 Plus
roo 9092 roo DM_ROO 9092bp 1103..1154 671..722 125 71.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2478 592..722 123 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 7358..7419 662..723 121 66.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..6828 671..723 120 73.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2288..2365 652..723 115 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2445..2514 657..722 114 68.6 Plus
roo 9092 roo DM_ROO 9092bp 1056..1101 678..723 113 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2808..2860 668..720 112 67.9 Plus

BS13632.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:42:31 Download gff for BS13632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4385-PA 1..706 17..722 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:39:29 Download gff for BS13632.5prime
Subject Subject Range Query Range Percent Splice Strand
S-RB 1040..1754 7..722 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:24:40 Download gff for BS13632.5prime
Subject Subject Range Query Range Percent Splice Strand
S-RB 1040..1754 7..722 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:24:40 Download gff for BS13632.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 1061441..1062155 7..722 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:39:29 Download gff for BS13632.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1061441..1062155 7..722 99   Minus

BS13632.pep Sequence

Translation from 16 to 1809

> BS13632.pep
MSQQVFSAHPALAVDQLQQAEQEEHNTSSNHHQQRSATQSRRHTKAAPKK
FTLSRSCAGGGSGTLSGVHQQVKPSPSNPAISPECRKTLPVRTNYAAVDD
DDDIECEDVDEVNFGQQEKERERETRQPTKDCGTDETDHVQQRHKNTMTT
SATAASRHHHQDGGGGDQSDLSSVISSPSVSTVSSPLSTPTRLPQALQQQ
LHCCQKSTGMESRARTSPQQIQHPHRQHHQQQHHHHHHHHHLTAAGCTGG
GGGGGGSGGSGSCKAKKLDPRLNPSPYRQLLPIALCLLSFAAVFATLIVY
MDTTEIRHQQFRLNMSRDYELNGVAQDDPALIDFLRQIHMGKYLGKASPK
VAAAASVGVGPPPNSPRLAAAGSTFGSGNSSGSGADQLAHYVADLVGGKM
NGAVIQSLSGPLAHLITAPWLSEQLNWMGVLVEPEPRWYFTLRKQNAQRA
RMQVVHACVSPNTYPKEITIHNEDVRINSLHDEETSWFNSRVKCFPLYTI
MLACERTEYDLLSLGVQGHELEILQTLPFDKVKIDVISIHLLEDHEDVAD
YVLDITRFLAGKSYKLQRKIGRNYFYQRLNASASRTRKKDILLLKTP*

BS13632.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:00:41
Subject Length Description Subject Range Query Range Score Percent Strand
S-PA 597 CG4385-PA 1..597 1..597 3157 100 Plus
S-PB 597 CG4385-PB 1..597 1..597 3157 100 Plus