Clone Sequence Records
BS13649.3prime Sequence
622 bp (539 high quality bases) assembled on 2006-10-13
> BS13649.3prime
ATGGTCTAGAAAGCTTTTACAAGACATTGATTTTACTCATTTTGCTTTTG
CTTTCCGAGTCCGAATCCTCCGACCAAAAATCATCTGGCAAACAAATCGC
TTTCCAGCCCATTGCGTCCGCATCGTCAGAGATGGAATTCTGCTCATCCA
GCTGGTTGAAGGGACTGGCATTCAAAGGACCCGACCAACTCGCGACGCGA
CTAACTGGCGGTGGAATAAGGCAATCGGAATTCTCCTTCCGATACGTTCG
AGCCTTCAGTTTGTTTACTGCGTTGGGCAATTGCGGTACAGGCACCTCCT
CCTCGTCGTCGTCGGGCGATGAAGTGGAATTGGGCACATTTACGATGTAG
CTAATGGGATCCAGGCGGATCCCTATGGTTTTCTGGGAGGATCGGCTGTG
TGGTCGCGTCAGATGTGGATTGCCCTCTCGACGTCGCCGTGCGTTTCTAT
TTTCCGTCTTGAGCCTCCCGTTTGCCGACCTGCCGCCATTGATGACGCTC
CTCGTGGATATATTCACCGGGGGCGACTTTCGCCTGGCGGCAAGCTTCTT
CGGATGCGGAATCCTGTAGCGACCATTCGCGTAATCATTGCGCGGACTGA
CGAAAATTCCAGCCAAATATTT
BS13649.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-PA | 612 | CG11756-RA | 7..608 | 622..21 | 2960 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:16:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-RA | 746 | CG11756-RA | 92..697 | 622..17 | 2985 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:16:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11348211..11348816 | 622..17 | 2985 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:16:41 has no hits.
BS13649.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:42:39 Download gff for
BS13649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-PA | 7..612 | 17..622 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:42:01 Download gff for
BS13649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 92..697 | 17..622 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:26:32 Download gff for
BS13649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 92..697 | 17..622 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:26:32 Download gff for
BS13649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11348211..11348816 | 17..622 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:42:01 Download gff for
BS13649.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11242244..11242849 | 17..622 | 99 | | Minus |
BS13649.complete Sequence
644 bp assembled on 2009-08-24
GenBank Submission: KX803197
> BS13649.complete
GAAGTTATCAGTCGACATGCTTAAATATTTGGCTGGAATTTTCGTCAGTC
CGCGCAATGACTACGCGAATGGTCGCTACAGGATTCCGCATCCGAAGAAG
CTGGCCGCCAGGCGAAAGTCGCCCCCGGTGAATATATCCACGAGGAGCGT
CATCAATGGCGGCAGGTCGGCAAACGGGAGGCTCAAGACGGAAAATAGAA
ACGCACGGCGACGTCGAGAGGGCAATCCACATCTGACGCGACCACACAGC
CGATCCTCCCAGAAAACCATAGGGATCCGCCTGGATCCCATTAGCTACAT
CGTAAATGTGCCCAATTCCACTTCATCGCCCGACGACGACGAGGAGGAGG
TGCCTGTACCGCAATTGCCCAACGCAGTAAACAAACTGAAGGCTCGAACG
TATCGGAAGGAGAATTCCGATTGCCTTATTCCACCGCCAGTTAGTCGCGT
CGCGAGTTGGTCGGGTCCTTTGAATGCCAGTCCCTTCAACCAGCTGGATG
AGCAGAATTCCATCTCTGACGATGCGGACGCAATGGGCTGGAAAGCGATT
TGTTTGCCAGATGATTTTTGGTCGGAGGATTCGGACTCGGAAAGCAAAAG
CAAAATGAGTAAAATCAATGTCTTTTAAAAGCTTTCTAGACCAT
BS13649.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:31:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-RA | 612 | CG11756-PA | 1..612 | 17..628 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-RA | 746 | CG11756-RA | 86..697 | 17..628 | 3060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11348205..11348816 | 17..628 | 3060 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:31:41 has no hits.
BS13649.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:36 Download gff for
BS13649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..695 | 17..626 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:50:14 Download gff for
BS13649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..695 | 17..626 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:46 Download gff for
BS13649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..695 | 17..626 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:46 Download gff for
BS13649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11348205..11348814 | 17..626 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:50:14 Download gff for
BS13649.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11242238..11242847 | 17..626 | 100 | | Plus |
BS13649.pep Sequence
Translation from 16 to 627
> BS13649.pep
MLKYLAGIFVSPRNDYANGRYRIPHPKKLAARRKSPPVNISTRSVINGGR
SANGRLKTENRNARRRREGNPHLTRPHSRSSQKTIGIRLDPISYIVNVPN
STSSPDDDEEEVPVPQLPNAVNKLKARTYRKENSDCLIPPPVSRVASWSG
PLNASPFNQLDEQNSISDDADAMGWKAICLPDDFWSEDSDSESKSKMSKI
NVF*
BS13649.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:44:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-PA | 203 | CG11756-PA | 1..203 | 1..203 | 1069 | 100 | Plus |
