Clone BS13751 Report

Search the DGRC for BS13751

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:137
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG14644-RA
Protein status:BS13751.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS13751.3prime Sequence

688 bp (597 high quality bases) assembled on 2006-10-13

> BS13751.3prime
ATGGTCTAGAAAGCTTCTACTTCATCAAATTCCTCACAATGTCTACAGGA
AAAGGAAAGACGTAGGACCGGGTGTCATCATTGCAGATGGAGTTCAGTGT
TTGCAAGTACCGTAGCTGCAGGGCTATGGGGTTGGTCTCCATTATGTCGG
CAGCCTCCTTCAGAGCAGTTACCGCATCTCGCTCCCCCTGCGCCGCGGCC
ACCTTGGCCTTGGCCTCACGCATCGCCTCCTGTTCCACAGCCAGGGCGCG
CTTCAGTTGATCAGGCATGAAGATCTCCTTGATCTCGACCCGTTCCACGC
GTATGCCCCAGGGCTCTGTGGAGTTGTACAATATACCCTCTATTTGGTTG
GAGAGGTACTCCTTGGACGAGAGCAAATCCATTAGCTTGTGGGTGCCGGC
CACGTTACGCAGCGTGGTCATTGCTAGCTTCTCGGTCGCCTCCTCCGGAT
CGTATACTTGCAGCATGGCGTCGAATGGGCTCTTGATGCTGTAGTACACC
ACTCCGTCGATGCTGATCGTCACCATGTCACGAGTGAGGATTTCCTGTCT
ATGTAGGTCAAATGACCTGGTACGTATGTCCACAACAGCGAGGTCATCAA
TGCAGGGCACGAGAAAGATGACGCCTGGCCCCCTCGGGGGCTTAGGGCGC
AAGCGACCCAGGCGCATGATTACCGCTCGCTCGTACTC

BS13751.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-PA 882 CG14644-RA 211..882 688..17 3310 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:45:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-RB 995 CG14644-RB 240..911 688..17 3330 99.7 Minus
CG14644-RA 1034 CG14644-RA 279..950 688..17 3330 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:45:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4252298..4252704 282..688 2005 99.5 Plus
3R 32079331 3R 4251978..4252242 17..281 1325 100 Plus
Blast to na_te.dros performed on 2015-02-12 17:45:42 has no hits.

BS13751.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:43:41 Download gff for BS13751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-PA 211..882 17..688 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:41:54 Download gff for BS13751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 279..954 11..688 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:07:14 Download gff for BS13751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 279..954 11..688 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:07:14 Download gff for BS13751.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4251974..4252242 11..281 98 <- Plus
3R 4252298..4252704 282..688 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:41:54 Download gff for BS13751.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 77696..77964 11..281 98 <- Plus
arm_3R 78020..78426 282..688 99   Plus

BS13751.5prime Sequence

763 bp (672 high quality bases) assembled on 2006-10-13

> BS13751.5prime
GAAGTTATCAGTCGACATGGACAATAATCCGACGACCCCTGCTTTGCTTG
CTCAGAGCTCCTCGGTAAACGTGTTCCACGATGAATCACTGTTACCTCAG
CGTAATGTAAAAACAAGTGAGAATGTTCCACCAACTTGTGCGGAGAAAAC
GTTGTTTGTGCTGTCCATGATTCTGATAGTCCTTTGCCTGCCGTGGTCCC
TATTCTGCTGTCTCAGGGTAATGTCGGAGTACGAGCGAGCGGTAATCCTG
CGCCTGGGTCGCCTGCGCCCTAAGCCCCCGAGGGGGCCAGGCGTCATCTT
TCTCGTGCCCTGCATTGATGACCTCGCTGTTGTGGACATACGTACCAGGT
CATTTGACCTACATAGACAGGAAATCCTCACTCGTGACATGGTGACGATC
AGCATCGACGGAGTGGTGTACTACAGCATCAAGAGCCCATTCGACGCCAT
GCTGCAAGTATACGATCCGGAGGAGGCGACCGAGAAGCTAGCAATGACCA
CGCTGCGTAACGTGGCCGGCACCCACAAGCTAATGGATTTGCTCTCGTCC
AAGGAGTACCTCTCCAACCAAATAGAGGGTATATTGTACAACTCCACAGA
GCCCTGGGGCATACGCGTGGAACGGGTCGAGATCAAGGAGATCTTCATGC
CTGATCAACTGAAGCGCGCCCTGGCTGTGGAACAGGAGGCGATGCGTGAG
GCCAAGCCAAAGTGGCCGCGGCGCAAGGGGAGCGAGATGCGGTAACTGCT
CTGAAGGAAGCTG

BS13751.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:41:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-PA 882 CG14644-RA 1..690 17..706 3450 100 Plus
CG14644-PA 882 CG14644-RA 691..743 706..758 215 96.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:40:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-RA 1034 CG14644-RA 69..816 17..763 3670 99.5 Plus
CG14644-RB 995 CG14644-RB 228..777 215..763 2680 99.3 Plus
CG14644-RB 995 CG14644-RB 69..170 17..118 510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:40:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4252298..4252814 633..117 2585 100 Minus
3R 32079331 3R 4252112..4252242 763..634 560 96.9 Minus
3R 32079331 3R 4252874..4252975 118..17 510 100 Minus
Blast to na_te.dros performed on 2015-02-03 06:40:34 has no hits.

BS13751.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:43:42 Download gff for BS13751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-PA 1..748 17..763 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:30:21 Download gff for BS13751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 66..816 11..763 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:35 Download gff for BS13751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 66..816 11..763 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:35 Download gff for BS13751.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4252112..4252242 634..763 96 <- Minus
3R 4252298..4252814 117..633 100 <- Minus
3R 4252876..4252978 11..116 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:30:21 Download gff for BS13751.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 77834..77964 634..763 96 <- Minus
arm_3R 78020..78536 117..633 100 <- Minus
arm_3R 78598..78700 11..116 97   Minus

BS13751.complete Sequence

914 bp assembled on 2006-11-01

GenBank Submission: FJ637519

> BS13751.complete
GAAGTTATCAGTCGACATGGACAATAATCCGACGACCCCTGCTTTGCTTG
CTCAGAGCTCCTCGGTAAACGTGTTCCACGATGAATCACTGTTACCTCAG
CGTAATGTAAAAACAAGTGAGAATGTTCCACCAACTTGTGCGGAGAAAAC
GTTGTTTGTGCTGTCCATGATTCTGATAGTCCTTTGCCTGCCGTGGTCCC
TATTCTGCTGTCTCAGGGTAATGTCGGAGTACGAGCGAGCGGTAATCCTG
CGCCTGGGTCGCCTGCGCCCTAAGCCCCCGAGGGGGCCAGGCGTCATCTT
TCTCGTGCCCTGCATTGATGACCTCGCTGTTGTGGACATACGTACCAGGT
CATTTGACCTACATAGACAGGAAATCCTCACTCGTGACATGGTGACGATC
AGCATCGACGGAGTGGTGTACTACAGCATCAAGAGCCCATTCGACGCCAT
GCTGCAAGTATACGATCCGGAGGAGGCGACCGAGAAGCTAGCAATGACCA
CGCTGCGTAACGTGGCCGGCACCCACAAGCTAATGGATTTGCTCTCGTCC
AAGGAGTACCTCTCCAACCAAATAGAGGGTATATTGTACAACTCCACAGA
GCCCTGGGGCATACGCGTGGAACGGGTCGAGATCAAGGAGATCTTCATGC
CTGATCAACTGAAGCGCGCCCTGGCTGTGGAACAGGAGGCGATGCGTGAG
GCCAAGGCCAAGGTGGCCGCGGCGCAGGGGGAGCGAGATGCGGTAACTGC
TCTGAAGGAGGCTGCCGACATAATGGAGACCAACCCCATAGCCCTGCAGC
TACGGTACTTGCAAACACTGAACTCCATCTGCAATGATGACACCCGGTCC
TACGTCTTTCCTTTTCCTGTAGACATTGTGAGGAATTTGATGAAGTAGAA
GCTTTCTAGACCAT

BS13751.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:40:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-RA 882 CG14644-PA 1..882 17..898 4410 100 Plus
CG14644-RB 678 CG14644-PB 1..678 221..898 3390 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:40:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-RA 1034 CG14644-RA 69..950 17..898 4410 100 Plus
CG14644-RB 995 CG14644-RB 228..911 215..898 3420 100 Plus
CG14644-RB 995 CG14644-RB 69..170 17..118 510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:40:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4252298..4252814 633..117 2585 100 Minus
3R 32079331 3R 4251978..4252242 898..634 1325 100 Minus
3R 32079331 3R 4252874..4252975 118..17 510 100 Minus
Blast to na_te.dros performed on 2014-11-27 06:40:34 has no hits.

BS13751.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:39:13 Download gff for BS13751.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 1..882 17..898 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:12:39 Download gff for BS13751.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 66..954 11..904 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:27 Download gff for BS13751.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 69..950 17..898 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:39:13 Download gff for BS13751.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 66..954 11..904 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:28 Download gff for BS13751.complete
Subject Subject Range Query Range Percent Splice Strand
CG14644-RA 69..950 17..898 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:28 Download gff for BS13751.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4252876..4252975 17..116 100   Minus
3R 4251978..4252242 634..898 100 <- Minus
3R 4252298..4252814 117..633 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:27 Download gff for BS13751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 77700..77964 634..898 100 <- Minus
arm_3R 78020..78536 117..633 100 <- Minus
arm_3R 78598..78697 17..116 100   Minus

BS13751.pep Sequence

Translation from 16 to 897

> BS13751.pep
MDNNPTTPALLAQSSSVNVFHDESLLPQRNVKTSENVPPTCAEKTLFVLS
MILIVLCLPWSLFCCLRVMSEYERAVILRLGRLRPKPPRGPGVIFLVPCI
DDLAVVDIRTRSFDLHRQEILTRDMVTISIDGVVYYSIKSPFDAMLQVYD
PEEATEKLAMTTLRNVAGTHKLMDLLSSKEYLSNQIEGILYNSTEPWGIR
VERVEIKEIFMPDQLKRALAVEQEAMREAKAKVAAAQGERDAVTALKEAA
DIMETNPIALQLRYLQTLNSICNDDTRSYVFPFPVDIVRNLMK*

BS13751.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14644-PA 293 CG14644-PA 1..293 1..293 1490 100 Plus
CG14644-PB 225 CG14644-PB 1..225 69..293 1133 100 Plus
CG33253-PA 367 CG33253-PA 33..315 5..288 692 48.2 Plus
CG33253-PB 414 CG33253-PB 33..315 5..288 692 48.2 Plus
CG33253-PC 302 CG33253-PC 3..250 41..288 658 50.4 Plus