Clone Sequence Records
BS13756.3prime Sequence
667 bp (579 high quality bases) assembled on 2006-10-13
> BS13756.3prime
ATGGTCTAGAAAGCTTTTATAAGGATCGGAGGCAGTAAAATGTTAGCGAT
ATGATCGTACCCATTTTTCGTGCACTTGTAGCTGGCCATGCGATTGCCAA
AGTCCACGGCAACTGAAACGGATCTTTCCCGGATATAGAGGGCGTAGATG
AAAGCGCCCACGAAGGTGTCTCCTGCTCCCAAGGCGTCCACGATGCGTTT
GGGCTTGTGCGGCTTGACGTGGGTGAAGTTACCATTGAGATCCAAGATGC
CGGCACCCTGATCGCCCCAAAGGACGACCACATATGGTCGCTTGAGATTA
AGGCCCCAACGCATTCGCAATCGCTCGTCCAGCTGCATGCAGGCATCCTC
CAGAGAAACCCAACCATTCGGTTGGGCCAACTTCTTAGAGAATACGGCAT
AGTCACAGTAATCCATCAGAGGCCACATGTCATCCAGGTTGTTATCGAAC
TCCATCGATAGTACGATCTTCTCCTTTCTGTTCGCATTATATGCCTCTAT
GTCCTTGACCATCGGCAATGACTTATCAAAGTATAGTGCCCGAATGTGAA
TCCATCCATATTGGTTAAGGTTCAGCTTTCGGAAATCATCAATGCTAACG
TACGGGAAGTTATTATTGCAATAGACAATGTTCCGCGTCTTAGTCGCCTT
GGTGAGTATCACGGATG
BS13756.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:40:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-PB | 969 | CG7551-RB | 320..963 | 667..24 | 3220 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:20:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-RB | 1136 | CG7551-RB | 390..1039 | 667..17 | 3230 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:20:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11458879..11459522 | 667..24 | 3220 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:20:37 has no hits.
BS13756.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:43:45 Download gff for
BS13756.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-PB | 320..969 | 17..667 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:08:05 Download gff for
BS13756.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 390..1039 | 17..667 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:11:21 Download gff for
BS13756.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 390..1039 | 17..667 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:11:21 Download gff for
BS13756.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11458879..11459532 | 14..667 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:08:05 Download gff for
BS13756.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11451979..11452632 | 14..667 | 99 | -> | Minus |
BS13756.5prime Sequence
725 bp (653 high quality bases) assembled on 2006-10-13
> BS13756.5prime
GAAGTTATCAGTCGACATGACTCAATATGGCCACAAACTGAGCTGGGCTG
TTGGCAAAAAGACGGTGTTGTGCATCGGCACAACGACCATTGACTTTGTC
TCGACCATAAAACGTTTTCCCGAGGAGAACTCACATCAGAAGGTCATTGG
AGGATACTGGATTCGCGGTGGCAAGGCCTCGAACAACTGTACTGTTTTGG
CCAATCTGGGCGTCAAAGTGGAGTTCCTAGGAATGCTGAGCAGTTGGAGT
GTGTTTCAAGTTCTGGTCGATGACTTGAAGAGTCGTGGCATCATTATCGA
CAACTGTCCAACCTGTGACCAGGGTGCACCCTTCTCATCCGTGATACTCA
CCAAGGCGACTAAGACGCGGAACATTGTCTATTGCAATAATAACTTCCCG
TACGTTAGCATTGATGATTTCCGAAAGCTGAACCTTAACCAATATGGATG
GATTCACATTCGGGCACTATACTTTGATAAGTCATTGCCGATGGTCAAGG
ACATAGAGGCATATAATGCGAACAGAAAGGAGAAGATCGTACTATCGATG
GAGTTCGATAACAACCTGGATGACATGTGGCCTCTGATGGATTACTGTGA
CTATGCCGTATTCTCTAAGAAGTTGGCCCAACCGAATGGTTGGGTTTCTC
TGGAGGATGCCTGCATGCAGCTGGACGAGCGATTGCGAATGCGTTGGGGC
TTAAATCTCAGCGACATATGTGGTC
BS13756.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:40:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-PB | 969 | CG7551-RB | 1..711 | 17..725 | 3425 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-RB | 1136 | CG7551-RB | 71..781 | 17..725 | 3475 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:43:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11458560..11459253 | 17..710 | 3440 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:43:04 has no hits.
BS13756.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:43:46 Download gff for
BS13756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-PB | 1..711 | 17..725 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:08:05 Download gff for
BS13756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 62..781 | 7..725 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:42:31 Download gff for
BS13756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 62..781 | 7..725 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:42:31 Download gff for
BS13756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11458551..11459270 | 7..725 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:08:05 Download gff for
BS13756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11451651..11452370 | 7..725 | 98 | | Plus |
BS13756.complete Sequence
1002 bp assembled on 2012-04-25
GenBank Submission: KX806360
> BS13756.complete
GAAGTTATCAGTCGACATGACTCAATATGGCCACAAACTGAGCTGGGCTG
TTGGCAAAAAGACGGTGTTGTGCATCGGCACAACGACCATTGACTTTGTC
TCGACCATAAAACGTTTTCCCGAGGAGAACTCACATCAGAAGGTCATTGG
AGGATACTGGATTCGCGGTGGCAAGGCCTCGAACAACTGTACTGTTTTGG
CCAATCTGGGCGTCAAAGTGGAGTTCCTAGGAATGCTGAGCAGTTGGAGT
GTGTTTCAAGTTCTGGTCGATGACTTGAAGAGTCGTGGCATCATTATCGA
CAACTGTCCAACCTGTGACCAGGGTGCACCCTTCTCATCCGTGATACTCA
CCAAGGCGACTAAGACGCGGAACATTGTCTATTGCAATAATAACTTCCCG
TACGTTAGCATTGATGATTTCCGAAAGCTGAACCTTAACCAATATGGATG
GATTCACATTCGGGCACTATACTTTGATAAGTCATTGCCGATGGTCAAGG
ACATAGAGGCATATAATGCGAACAGAAAGGAGAAGATCGTACTATCGATG
GAGTTCGATAACAACCTGGATGACATGTGGCCTCTGATGGATTACTGTGA
CTATGCCGTATTCTCTAAGAAGTTGGCCCAACCGAATGGTTGGGTTTCTC
TGGAGGATGCCTGCATGCAGCTGGACGAGCGATTGCGAATGCGTTGGGGC
CTTAATCTCAAGCGACCATATGTGGTCGTCCTTTGGGGCGATCAGGGTGC
CGGCATCTTGGATCTCAATGGTAACTTCACCCACGTCAAGCCGCACAAGC
CCAAACGCATCGTGGACGCCTTGGGAGCAGGAGACACCTTCGTGGGCGCT
TTCATCTACGCCCTCTATATCCGGGAAAGATCCGTTTCAGTTGCCGTGGA
CTTTGGCAATCGCATGGCCAGCTACAAGTGCACGAAAAATGGGTACGATC
ATATCGCTAACATTTTACTGCCTCCGATCCTTATAAAAGCTTTCTAGACC
AT
BS13756.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:10:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-RB | 969 | CG7551-PB | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:10:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-RB | 1136 | CG7551-RB | 71..1033 | 17..979 | 4815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:10:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11458560..11459522 | 17..979 | 4815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:10:53 has no hits.
BS13756.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:55:56 Download gff for
BS13756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 62..1039 | 7..986 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:29 Download gff for
BS13756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 71..1037 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:18 Download gff for
BS13756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 71..1037 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:57:13 Download gff for
BS13756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 71..1037 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:58:52 Download gff for
BS13756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7551-RB | 71..1037 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:58:52 Download gff for
BS13756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11458560..11459526 | 17..984 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:18 Download gff for
BS13756.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11451660..11452626 | 17..984 | 99 | | Plus |
BS13756.pep Sequence
Translation from 16 to 996
> BS13756.pep
MTQYGHKLSWAVGKKTVLCIGTTTIDFVSTIKRFPEENSHQKVIGGYWIR
GGKASNNCTVLANLGVKVEFLGMLSSWSVFQVLVDDLKSRGIIIDNCPTC
DQGAPFSSVILTKATKTRNIVYCNNNFPYVSIDDFRKLNLNQYGWIHIRA
LYFDKSLPMVKDIEAYNANRKEKIVLSMEFDNNLDDMWPLMDYCDYAVFS
KKLAQPNGWVSLEDACMQLDERLRMRWGLNLKRPYVVVLWGDQGAGILDL
NGNFTHVKPHKPKRIVDALGAGDTFVGAFIYALYIRERSVSVAVDFGNRM
ASYKCTKNGYDHIANILLPPILIKAF*
BS13756.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:20:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7551-PB | 322 | CG7551-PB | 1..322 | 1..322 | 1726 | 100 | Plus |
| CG7328-PA | 306 | CG7328-PA | 5..304 | 15..318 | 660 | 42.1 | Plus |
| CG12289-PA | 378 | CG12289-PA | 11..314 | 15..316 | 572 | 36.2 | Plus |
| CG7335-PA | 372 | CG7335-PA | 30..357 | 14..311 | 290 | 26.8 | Plus |
