Clone BS13764 Report

Search the DGRC for BS13764

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:137
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG14721-RA
Protein status:BS13764.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS13764.3prime Sequence

630 bp (548 high quality bases) assembled on 2006-10-13

> BS13764.3prime
ATGGTCTAGAAAGCTTCTATGTCTTGGCGGCTTGTCGCACCTTATCCTCA
AATTCGTAGGCACCCATAGACCAGATCAGGTTGGCGTCCGTCTCCACCTG
GACGAACTCGGTCGCATAGGTGTTTGAGGTGCTTACCATACCACCAAACT
CCAGCTGTGCATGATATAGGTTCCATTTGAGTCCCGTGGTAGTGACATTG
TGGGCCGACGATCCCACGGGCATCAGAGAGCACCATCGCTGGCTGGTGAC
CAGGTCGACGGGCACCTGTATCGTGTGCTTTCCCGGCCGCAATAACCACG
TCACCGAATCCCCGCTCAACAGGAAGACATTGCAGTTATCCTTTTGCGAT
TTGTACAGCGTGTTTAGGTTGGCCATGACCTGGTCCAAGCGACCGGAAGT
GTCATGAAACACCACCACATCCTGGATTTTACGCTGCGTCATTACGGGTT
GCAGTACGGCCATGGCCTTCGTGAAATCTGTTGCATCCTGGTCGGGTGTG
TGGACTTTCGGCGTGGTCTTGAAGAAATCGACCGTTTCCTCAGTGATCGA
GTCGAAGTCCCCCGTTATCACATCGAGCGGTTCAAGTGGTGCCGTGTGCG
CGGAACCCTTTGGCTTCTTTGACATTGCCT

BS13764.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-PA 1038 CG14721-RA 451..1038 604..17 2840 99.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RB 1142 CG14721-RB 303..917 630..16 2955 98.7 Minus
CG14721-RA 1248 CG14721-RA 472..1086 630..16 2955 98.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11735979..11736443 630..166 2205 98.3 Minus
3R 32079331 3R 11736499..11736652 169..16 755 99.4 Minus
Blast to na_te.dros performed on 2015-01-30 17:51:00 has no hits.

BS13764.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:43:52 Download gff for BS13764.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-PA 425..1038 17..630 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:51:02 Download gff for BS13764.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 472..1086 16..630 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:05:41 Download gff for BS13764.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 472..1086 16..630 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:05:41 Download gff for BS13764.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11735979..11736443 166..630 98 -> Minus
3R 11736503..11736652 16..165 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:51:02 Download gff for BS13764.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7561701..7562165 166..630 98 -> Minus
arm_3R 7562225..7562374 16..165 100   Minus

BS13764.5prime Sequence

593 bp (548 high quality bases) assembled on 2006-10-13

> BS13764.5prime
GAAGTTATCAGTCGACATGATTTTGGTTAAATTATATGGGACGGGCGGCT
GCACAATGACGGCGGCAGGCGCTCCAGGGTCCGCCTTAAATTGGATGCGC
CGCTCTCGCCACGGATTCGGTTTGATCCGAATCACGCGAGTTGGCAGGCC
GGCGCACCAACGCACCACCCATTCCGCCACCCACCGCTTCCTTTGCACAA
AAACAACAATCGGATTTCGGCAGCAAATGGACCACACAATACCGCCCAAA
GAGTACAAATGGACGCCGGGCAACCTGATCAACGAGAACTTTAAGCTGGG
CGACCATGGACACGTTTGCGTGGTGCTCAATCGGCAGATTCAAGTGCCGG
CGCACGTGGTGAAACTGCTATGGAAAAACGCCGCCGTTCGGTGTGCTGTC
GATGGAGGCTCCAACCACTGGCGTGACTTTGTCGTGGCTCAGGCAATGTC
AAAGAAGGCCAATGGCTCCGCGCCCACGACACCACTTGAACCGCTCGATG
TGATAACGGGTGACTTCGACTCGATCACTGAGGAAACGGTCGATTTCTTC
AAGACCACGCCGAAAGTCCACACACCCGACCAGGATGCAACAG

BS13764.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-PA 1038 CG14721-RA 1..577 17..593 2860 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RA 1248 CG14721-RA 48..624 17..593 2870 99.8 Plus
CG14721-RB 1142 CG14721-RB 1..455 139..593 2260 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11735494..11735857 17..380 1820 100 Plus
3R 32079331 3R 11735918..11736131 380..593 1055 99.5 Plus
Blast to na_te.dros performed on 2015-02-10 17:40:05 has no hits.

BS13764.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:43:52 Download gff for BS13764.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-PA 1..577 17..593 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:42:06 Download gff for BS13764.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..624 17..593 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:59:05 Download gff for BS13764.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..624 17..593 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:59:05 Download gff for BS13764.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11735494..11735857 17..380 100 -> Plus
3R 11735919..11736131 381..593 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:42:06 Download gff for BS13764.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7561216..7561579 17..380 100 -> Plus
arm_3R 7561641..7561853 381..593 99   Plus

BS13764.complete Sequence

1070 bp assembled on 2006-11-01

GenBank Submission: FJ637523

> BS13764.complete
GAAGTTATCAGTCGACATGATTTTGGTTAAATTATATGGGACGGGCGGCT
GCACAATGACGGCGGCAGGCGCTCCAGGGTCCGCCTTAAATTGGATGCGC
CGCTCTCGCCACGGATTCGGTTTGATCCGAATCACGCGAGTTGGCAGGCC
GGCGCACCAACGCACCACCCATTCCGCCACCCACCGCTTCCTTTGCACAA
AAACAACAATCGGATTTCGGCAGCAAATGGACCACACAATACCGCCCAAA
GAGTACAAATGGACGCCGGGCAACCTGATCAACGAGAACTTTAAGCTGGG
CGACCATGGACACGTTTGCGTGGTGCTCAATCGGCAGATTCAAGTGCCGG
CGCACGTGGTGAAACTGCTATGGAAAAACGCCGCCGTTCGGTGTGCTGTC
GATGGAGGCTCCAACCACTGGCGTGACTTTGTCGTGGCTCAGGCAATGTC
AAAGAAGGCCAATGGCTCCGCGCCCACGACACCACTTGAACCGCTCGATG
TGATAACGGGTGACTTCGACTCGATCACTGAGGAAACGGTCGATTTCTTC
AAGACCACGCCGAAAGTCCACACACCCGACCAGGATGCAACAGATTTCAC
GAAGGCCATGGCCGTACTGCAACCCGTAATGACGCAGCGTAAAATCCAGG
ATGTGGTGGTGTTTCATGACACTTCCGGTCGCTTGGACCAGGTCATGGCC
AACCTAAACACGCTGTACAAATCGCAAAAGGATAACTGCAATGTCTTCCT
GTTGAGCGGGGATTCGGTGACGTGGTTATTGCGGCCGGGAAAGCACACGA
TACAGGTGCCCGTCGACCTGGTCACCAGCCAGCGATGGTGCTCTCTGATG
CCCGTGGGATCGTCGGCCCACAATGTCACTACCACGGGACTCAAATGGAA
CCTATATCATGCACAGCTGGAGTTTGGTGGTATGGTAAGCACCTCAAACA
CCTATGCGACCGAGTTCGTCCAGGTGGAGACGGACGCCAACCTGATCTGG
TCTATGGGTGCCTACGAATTTGAGGATAAGGTGCGACAAGCCGCCAAGAC
ATAGAAGCTTTCTAGACCAT

BS13764.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:03:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RA 1038 CG14721-PA 1..1038 17..1054 5175 99.9 Plus
CG14721-RB 828 CG14721-PB 1..828 227..1054 4125 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RA 1248 CG14721-RA 48..1086 17..1055 5180 99.9 Plus
CG14721-RB 1142 CG14721-RB 1..917 139..1055 4570 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11735918..11736443 380..905 2615 99.8 Plus
3R 32079331 3R 11735494..11735857 17..380 1820 100 Plus
3R 32079331 3R 11736499..11736652 902..1055 755 99.4 Plus
Blast to na_te.dros performed on 2014-11-26 15:03:24 has no hits.

BS13764.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:38:57 Download gff for BS13764.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1038 17..1054 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:12:20 Download gff for BS13764.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1086 17..1055 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:25 Download gff for BS13764.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1085 17..1054 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:38:57 Download gff for BS13764.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1086 17..1055 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:33 Download gff for BS13764.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1085 17..1054 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:33 Download gff for BS13764.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11735494..11735857 17..380 100 -> Plus
3R 11735919..11736443 381..905 99 -> Plus
3R 11736503..11736651 906..1054 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:25 Download gff for BS13764.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7562225..7562373 906..1054 100   Plus
arm_3R 7561216..7561579 17..380 100 -> Plus
arm_3R 7561641..7562165 381..905 99 -> Plus

BS13764.pep Sequence

Translation from 16 to 1053

> BS13764.pep
MILVKLYGTGGCTMTAAGAPGSALNWMRRSRHGFGLIRITRVGRPAHQRT
THSATHRFLCTKTTIGFRQQMDHTIPPKEYKWTPGNLINENFKLGDHGHV
CVVLNRQIQVPAHVVKLLWKNAAVRCAVDGGSNHWRDFVVAQAMSKKANG
SAPTTPLEPLDVITGDFDSITEETVDFFKTTPKVHTPDQDATDFTKAMAV
LQPVMTQRKIQDVVVFHDTSGRLDQVMANLNTLYKSQKDNCNVFLLSGDS
VTWLLRPGKHTIQVPVDLVTSQRWCSLMPVGSSAHNVTTTGLKWNLYHAQ
LEFGGMVSTSNTYATEFVQVETDANLIWSMGAYEFEDKVRQAAKT*

BS13764.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-PA 345 CG14721-PA 1..345 1..345 1841 100 Plus
CG14721-PB 275 CG14721-PB 1..275 71..345 1466 100 Plus