Clone Sequence Records
BS13766.3prime Sequence
732 bp (663 high quality bases) assembled on 2006-10-13
> BS13766.3prime
ATGGTCTAGAAAGCTTCTAATTAGCACGTGGCACACATCCCACCTTGTAG
ATCCTGAAGGGCACATTGTGGCGCCTCTCGTCCAATGTGATGAGCATGCA
GTAGAGCAGTTGCTGCAGCTTTCGCATCCTCAGCACATACGGGGCACTTT
CGCAGTCCTTGAAAAGCGGCCTTCCCCTCGCCTGGCAGTGGAAGAGGAAG
AAGGCTCCGCCGGAGGCGAACTCTGGGATAAACCCAAAGGCCAGAGCCTG
ATCCCTAAGCTGAAGAATTCCCGTTTGCAAGTGCTGGCCAAAGAACTTAC
TCAGTGCGGATCCCAGGCTCTTGGTTCTGCTGTACAATTTACCGGTACAG
AGCTTTTCGATGTCCACCCAAAACTCGTGACCATCAAGGAAGCAGGTGGT
GTTCAAGCACTCCAGACAGAGCTCTCCTGTACGATCCCAATGTTGCCTGG
TCGCCAAGCTTTCGTCATAGTAGCCCCGCCCATTCGACATGATCTTGTCC
AGCGCACTGGAGTTCCAGGAATCCAAGGACTGAAAACTGCCTGCACAACA
GGCTAACACGCAGCATGCCAATGCCTGACCAGGAGGTGAGGTCCTTTCGG
ATCCGGACTCCGACGAGGAACTATTTTCCCCTGGTTTCACTTGCTGTGTG
CTGCCCCAAAGTGACCACCAGTGGTTGGAGATCTCCACCTCGTAGTGCTC
CTCCTTTTTCCCACTTCTCTTCCGCAGACAAC
BS13766.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:41:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-PA | 831 | CG14402-RA | 116..831 | 732..17 | 3405 | 99 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:09:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 1020 | CG14402-RB | 202..917 | 732..17 | 3475 | 99 | Minus |
| CG14402-RA | 1688 | CG14402-RA | 202..917 | 732..17 | 3475 | 99 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20849501..20850216 | 732..17 | 3475 | 99 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:09:24 has no hits.
BS13766.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:43:55 Download gff for
BS13766.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-PA | 116..831 | 17..732 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:01:50 Download gff for
BS13766.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 202..921 | 13..732 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:14:37 Download gff for
BS13766.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 202..921 | 13..732 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:14:37 Download gff for
BS13766.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20849501..20850220 | 13..732 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:01:50 Download gff for
BS13766.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20849501..20850220 | 13..732 | 98 | | Minus |
BS13766.5prime Sequence
677 bp (636 high quality bases) assembled on 2006-10-13
> BS13766.5prime
GAAGTTATCAGTCGACATGTGGCAAGGACACAAGGAAAAACCCACTTCCA
CCCGTTCGATGGCCAGGGAAGTAGTCCACCCTGAGAGGCCTTTGCCGCCG
TGGAGTCGTCTTCTGGAGCACAATGCCGAAGGTTGTCTGCGGAAGAGAAG
TGGGGAAAAGGAGGAGCACTACGAGGTGGAGATCTCCAACCACTTGTGGT
CACTTTGGGGCAGCACACAGCAAGTGAAACCAGGGGAAAATAGTTCCTCG
TCGGAGTCCGGATCCGAAAGGACCTCACCTCCTGGTCAGGCATTGGCATG
CTGCGTGTTAGCCTGTTGTGCAGGCAGTTTTCAGTCCTTGGATTCCTGGA
ACTCCAGTGCGCTGGACAAGATCATGTCGAATGGGCGGGGCTACTATGAC
GAAAGCTTGGCGACCAGGCAACATTGGGATCGTACAGGAGAGCTCTGTCT
GGAGTGCTTGAACACCACCTGCTTCCTTGATGGTCACGAGTTTTGGGTGG
ACATCGAAAAGCTCTGTACCGGTAAATTGTACAGCAGAACCAAGAGCCTG
GGATCCGCACTGAGTAAGTTCTTTGGCCAGCACTTGCAAACGGGAATTCT
TCAGCTTAGGGATCAGGCTCTGGCCTTTGGGTTTATCCCAGAGTTCGCCT
CCGGCGGAGCCTTCTTCCTCTTCCACT
BS13766.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:41:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-PA | 831 | CG14402-RA | 1..661 | 17..677 | 3230 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:26:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 1020 | CG14402-RB | 83..747 | 13..677 | 3265 | 99.4 | Plus |
| CG14402-RA | 1688 | CG14402-RA | 83..747 | 13..677 | 3265 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20849382..20850046 | 13..677 | 3265 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:26:27 has no hits.
BS13766.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:43:55 Download gff for
BS13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-PA | 1..661 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:06:05 Download gff for
BS13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 79..747 | 9..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:41:50 Download gff for
BS13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 79..747 | 9..677 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:41:50 Download gff for
BS13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20849378..20850046 | 9..677 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:06:05 Download gff for
BS13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20849378..20850046 | 9..677 | 99 | | Plus |
BS13766.complete Sequence
863 bp assembled on 2006-11-01
GenBank Submission: FJ637525
> BS13766.complete
GAAGTTATCAGTCGACATGTGGCAAGGACACAAGGAAAAACCCACTTCCA
CCCGTTCGATGGCCAGGGAAGTAGTCCACCCTGAGAGGCCTTTGCCGCCG
TGGAGTCGTCTTCTGGAGCACAATGCCGAAGGTTGTCTGCGGAAGAGAAG
TGGGGAAAAGGAGGAGCACTACGAGGTGGAGATCTCCAACCACTTGTGGT
CACTTTGGGGCAGCACACAGCAAGTGAAACCAGGGGAAAATAGTTCCTCG
TCGGAGTCCGGATCCGAAAGGACCTCACCTCCTGGTCAGGCATTGGCATG
CTGCGTGTTAGCCTGTTGTGCAGGCAGTTTTCAGTCCTTGGATTCCTGGA
ACTCCAGTGCGCTGGACAAGATCATGTCGAATGGGCGGGGCTACTATGAC
GAAAGCTTGGCGACCAGGCAACATTGGGATCGTACAGGAGAGCTCTGTCT
GGAGTGCTTGAACACCACCTGCTTCCTTGATGGTCACGAGTTTTGGGTGG
ACATCGAAAAGCTCTGTACCGGTAAATTGTACAGCAGAACCAAGAGCCTG
GGATCCGCACTGAGTAAGTTCTTTGGCCAGCACTTGCAAACGGGAATTCT
TCAGCTTAGGGATCAGGCTCTGGCCTTTGGGTTTATCCCAGAGTTCGCCT
CCGGCGGAGCCTTCTTCCTCTTCCACTGCCAGGCGAGGGGAAGGCCGCTT
TTCAAGGACTGCGAAAGTGCCCCGTATGTGCTGAGGATGCGAAAGCTGCA
GCAACTGCTCTACTGCATGCTCATCACATTGGACGAGAGGCGCCACAATG
TGCCCTTCAGGATCTACAAGGTGGGATGTGTGCCACGTGCTAATTAGAAG
CTTTCTAGACCAT
BS13766.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 831 | CG14402-PB | 1..831 | 17..847 | 4080 | 99.4 | Plus |
| CG14402-RA | 831 | CG14402-PA | 1..831 | 17..847 | 4080 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:41:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 1020 | CG14402-RB | 83..917 | 13..847 | 4085 | 99.3 | Plus |
| CG14402-RA | 1688 | CG14402-RA | 83..917 | 13..847 | 4085 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:41:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20849382..20850216 | 13..847 | 4085 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:41:03 has no hits.
BS13766.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:38:59 Download gff for
BS13766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 1..831 | 17..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:12:23 Download gff for
BS13766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 22..864 | 9..851 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:07 Download gff for
BS13766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 87..917 | 17..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:39:00 Download gff for
BS13766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 22..864 | 9..851 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:28:10 Download gff for
BS13766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 87..917 | 17..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:10 Download gff for
BS13766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20849386..20850216 | 17..847 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:07 Download gff for
BS13766.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20849386..20850216 | 17..847 | 99 | | Plus |
BS13766.pep Sequence
Translation from 16 to 846
> BS13766.pep
MWQGHKEKPTSTRSMAREVVHPERPLPPWSRLLEHNAEGCLRKRSGEKEE
HYEVEISNHLWSLWGSTQQVKPGENSSSSESGSERTSPPGQALACCVLAC
CAGSFQSLDSWNSSALDKIMSNGRGYYDESLATRQHWDRTGELCLECLNT
TCFLDGHEFWVDIEKLCTGKLYSRTKSLGSALSKFFGQHLQTGILQLRDQ
ALAFGFIPEFASGGAFFLFHCQARGRPLFKDCESAPYVLRMRKLQQLLYC
MLITLDERRHNVPFRIYKVGCVPRAN*
BS13766.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:14:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-PB | 276 | CG14402-PB | 1..276 | 1..276 | 1504 | 100 | Plus |
| CG14402-PA | 276 | CG14402-PA | 1..276 | 1..276 | 1504 | 100 | Plus |
| CG32436-PA | 1737 | CG32436-PA | 1479..1715 | 23..269 | 385 | 38.6 | Plus |
| CG32462-PA | 284 | CG32462-PA | 37..264 | 11..269 | 299 | 33.1 | Plus |
