Clone Sequence Records
BS13783.complete Sequence
2408 bp assembled on 2009-12-07
GenBank Submission: KX801745
> BS13783.complete
GAAGTTATCAGTCGACATGAGATGGGAACTTCGTTATGGCTGGCAAATTG
TCACGTTCCGAACAAATTGCGCTACTGCTGCCGCCGTTGCATGCCACCAA
CTTTTGTGTCCTGTGTCTTTGACAAGTGCAGTGGAGATAATGCCGAATTC
CTTTCCGCCAGAGGGTCGTCGGCGGGAGCGAAGGTCGGGAAACTTGGTCC
TTCGAGCCGGATGCTGCTGCATCGGCAAATACTTTCTCCACAACCGCTGC
GCCTCGTCGGTGAAGAAGGAGTGCACCTTGGGCGAATACTCCGAGCTAAT
TGTCCCGCCCACGGCCATCTGCCCGGCGGTACTCGACCGCCAGCGATCCG
TGAATCAGGCTCACAAGGCCACGCACTTCCAAATCACGCCGCCGGACGAG
CTGAGCTGCCCGCTGCTGGTGTTCGTCAATCCGAAGAGCGGCGGTCGCCA
GGGGGATCGCATCCTGCGGAAGTTCCAGTACATGCTCAATCCGCGCCAGG
TGTACGACCTGTCCAAGGGCGGGCCCAAGGAGGGACTCACACTCTTCAAG
GACCTGCCTCGCTTCAGGGTCATTTGCTGTGGCGGCGACGGCACCGTCGG
CTGGGTTTTGGAAGCCATGGACTCCATAGAGTTGGCCAGCCAGCCGGCCA
TCGGAGTGATTCCCCTGGGAACGGGCAACGACCTGGCTCGCTGTCTCCGC
TGGGGCGGTGGATACGAGGGCGAAAACATCCCCAAACTGATGGACAAGTT
TCGAAGAGCCTCCACCGTCATGCTGGACCGCTGGAGCATCGAGGTGACCA
ATACTCCGCACAGCGATGACATGCGACCCAAGGTGACGCTGCACTCGAAC
ATGCAGAAGGTGATTGAGCTGTCGCAAAGTGTTGTGGTCGACAAATCGCT
GATGGAACGCTTCGAGGAAATCCAACGGCAGAGCAAGCAGGTGGCCACGT
CCATGGGCACGGCGGCCTCAAGCACATCGATTATGATGGCCAGCAAGACG
GAAACGGAAATGGAAACGATGGCCACGATGGAGTTCGGCAGCAGCACGAC
CACCACCAACAGAACGACCACGACCAAGAGCATTTCGATGTCCACGTTCG
AGACGCAGTGCCTGCAACAGACCCTGCGGACAGCGATGAGCAGCAGCAGC
AGCAACACGAGCAGCGGCAGTCCGTGCAACGGCAACCAGGATGCGGAAAC
GGAAGTAGATTCCCATGCCGCTGCCGCTGCCGATGTCCGGGAGAAGTCCG
TGCCCAGGAGGTCGGGTGAAACGGAAAAGCAATCACTTGAGACGCTGCTG
CTGCAGCACAAACAGCAGATGCAACAACAGCAGCAGCAACAGCAGCAAGG
AGTCACATCACTAGCTGTCGAGGAAGCTGCAACAGCAACGCCAGTCGGGA
GTAATCAAAGCGATAATAGTAGCCAGCGCAATAAGCAAAACAACATCCTT
AAACAGCAAATTACATTGTCATTGGACTTGTCCGACCATGAGGACGAGCC
CAAGGACGATGGCGGTGGCGCTGGCGATGGTACCAAGAGCAACGGCAACA
GCATTCCGGCAACACCAGCCACACCAATCACACCCACCACTCCGAATGCC
GCATCAAGTGTGCTGCAGCAACAACAGCAACAGCATCTCCAGTTCGAGCA
GCAACAGAAGCCCATCAAAGTGCAATCCGACAAGGACTGCACGGTGCCCT
ACAACATAATCAACAATTATTTCTCCGTCGGCGTGGACGCCGCCATCTGC
GTCAAGTTCCACCTGGAGCGTGAGAAGAACCCGCACAAATTCAACAGCCG
CATGAAGAACAAGCTGTGGTACTTCGAGTATGCAACATCCGAGACATTTG
CGGCATCCTGCAAGAATCTCCACGAGAGCATCGAGATTGTGTGCGATGGC
GTGGCCCTGGACTTGGCCAACGGACCCCACTTGCAGGGAGTGGCTCTGCT
CAACATCCCGTACACACACGGCGGTTCCAACCTGTGGGGCGAGCACCTGT
CTCAGAAACGGATCCGCAAGAGTGCCGGCCCCTTCGGCAAGAGTAAGAAA
CTACGCGCCGGCGACAAGGAGTTCTCCGCCACCAGCTTCAATTCCGTGGA
CCTCTCGGTGGCCATTCAGGACTTTGGAGATCGGCTCATCGAGGTAATTG
GGCTGGAGAACTGCCTGCACATGGGCCAGGTGAGGACTGGACTTCGCGCG
TCGGGACGCCGCCTGGCCCAGTGCAGCGAGGTGATCATCAAGACGAAGAA
AACATTTCCCATGCAGATAGATGGCGAGCCCTGGATGCAAATGCCCTGCA
CGATCAAGGTGACCCACAAGAACCAGGTGCCCATGCTGATGGCACCGCGG
TCGGAGAAGGGACGCGGATTTTTCAACCTGCTGTGCAGCTGAAAGCTTTC
TAGACCAT
BS13783.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:13:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgk-RG | 2376 | CG34361-PG | 1..2376 | 17..2392 | 11820 | 99.8 | Plus |
| Dgk-RK | 3303 | CG34361-PK | 1147..3303 | 236..2392 | 10725 | 99.8 | Plus |
| Dgk-RH | 3693 | CG34361-PH | 1537..3693 | 236..2392 | 10725 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:13:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgk-RG | 3152 | CG34361-RG | 442..2819 | 15..2392 | 11830 | 99.8 | Plus |
| Dgk-RK | 4214 | CG34361-RK | 1725..3881 | 236..2392 | 10725 | 99.8 | Plus |
| Dgk-RH | 6282 | CG34361-RH | 2115..4271 | 236..2392 | 10725 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:13:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7843012..7843917 | 1736..831 | 4530 | 100 | Minus |
| 2R | 25286936 | 2R | 7837246..7837475 | 2120..1891 | 1150 | 100 | Minus |
| 2R | 25286936 | 2R | 7846756..7846976 | 235..15 | 1105 | 100 | Minus |
| 2R | 25286936 | 2R | 7844541..7844757 | 836..620 | 1085 | 100 | Minus |
| 2R | 25286936 | 2R | 7836981..7837163 | 2302..2120 | 885 | 98.9 | Minus |
| 2R | 25286936 | 2R | 7845033..7845205 | 534..362 | 850 | 99.4 | Minus |
| 2R | 25286936 | 2R | 7837588..7837744 | 1891..1735 | 785 | 100 | Minus |
| 2R | 25286936 | 2R | 7845738..7845870 | 368..236 | 665 | 100 | Minus |
| 2R | 25286936 | 2R | 7844886..7844973 | 620..533 | 440 | 100 | Minus |
| 2R | 25286936 | 2R | 7836823..7836913 | 2392..2302 | 425 | 97.8 | Minus |
Blast to na_te.dros performed 2014-11-28 02:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2286..2856 | 1120..1661 | 251 | 55 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6533..6892 | 1313..1668 | 248 | 56.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2689 | 1036..1369 | 234 | 57.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2645 | 1317..1668 | 230 | 56.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2274..2673 | 1240..1649 | 225 | 54.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6859 | 1531..1668 | 210 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2335..2468 | 1532..1668 | 209 | 64.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2350..2970 | 1139..1747 | 204 | 55.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..7054 | 1131..1459 | 203 | 57 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2377..2508 | 1532..1661 | 197 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..6999 | 1572..1886 | 190 | 55.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..7037 | 1039..1349 | 180 | 54.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6701..6841 | 1518..1668 | 174 | 61.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2436 | 1534..1661 | 168 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2458 | 1557..1715 | 168 | 60.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6895 | 1036..1188 | 166 | 61.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6802..6923 | 1530..1652 | 163 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2519 | 1616..1812 | 161 | 57.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2527 | 1613..1802 | 149 | 56.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1473..1614 | 1532..1668 | 148 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6820 | 1562..1668 | 139 | 62 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1539..1602 | 1613..1675 | 137 | 70.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..7058 | 1101..1392 | 137 | 55.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1085..1156 | 1112..1188 | 130 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6791 | 1612..1661 | 124 | 72 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1061..1172 | 1560..1669 | 122 | 62.6 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1070..1161 | 1596..1691 | 119 | 61.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1126 | 1615..1668 | 119 | 70.9 | Plus |
| Doc3-element | 4740 | Doc3-element DOC3 4740bp | 488..568 | 1564..1641 | 118 | 65.9 | Plus |
BS13783.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:05 Download gff for
BS13783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgk-RG | 444..2818 | 17..2391 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:58 Download gff for
BS13783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgk-RG | 444..2818 | 17..2391 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:03:27 Download gff for
BS13783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgk-RG | 444..2818 | 17..2391 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:39 Download gff for
BS13783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgk-RG | 444..2818 | 17..2391 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:39 Download gff for
BS13783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7846756..7846974 | 17..235 | 100 | | Minus |
| 2R | 7836824..7836912 | 2303..2391 | 97 | <- | Minus |
| 2R | 7836981..7837162 | 2121..2302 | 98 | <- | Minus |
| 2R | 7837246..7837474 | 1892..2120 | 100 | <- | Minus |
| 2R | 7837588..7837743 | 1736..1891 | 100 | <- | Minus |
| 2R | 7843013..7843915 | 833..1735 | 100 | <- | Minus |
| 2R | 7844545..7844756 | 621..832 | 100 | <- | Minus |
| 2R | 7844886..7844972 | 534..620 | 100 | <- | Minus |
| 2R | 7845034..7845199 | 368..533 | 100 | <- | Minus |
| 2R | 7845739..7845870 | 236..367 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:58 Download gff for
BS13783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3725093..3725248 | 1736..1891 | 100 | <- | Minus |
| arm_2R | 3724486..3724667 | 2121..2302 | 98 | <- | Minus |
| arm_2R | 3724751..3724979 | 1892..2120 | 100 | <- | Minus |
| arm_2R | 3724329..3724417 | 2303..2391 | 97 | <- | Minus |
| arm_2R | 3730518..3731420 | 833..1735 | 100 | <- | Minus |
| arm_2R | 3732050..3732261 | 621..832 | 100 | <- | Minus |
| arm_2R | 3732391..3732477 | 534..620 | 100 | <- | Minus |
| arm_2R | 3732539..3732704 | 368..533 | 100 | <- | Minus |
| arm_2R | 3733244..3733375 | 236..367 | 100 | <- | Minus |
| arm_2R | 3734261..3734479 | 17..235 | 100 | | Minus |
BS13783.3prime Sequence
727 bp (618 high quality bases) assembled on 2006-10-13
> BS13783.3prime
ATGGTCTAGAAAGCTTTCAGCTGCACAGCAGGTTGAAAAATCCGCGTCCC
TTCTCCGACCGCGGTGCCATCAGCATGGGCACCTGGTTCTTGTGGGTCAC
CTTGATCGTGCAGGGCATTTGCATCCAGGGCTCGCCATCTATCTGCATGG
GAAATGTTTTCTTCGTCTTGATGATCACCTCGCTGCACTGGGCCAGGCGG
CGTCCCGACGCGCGAAGTCCAGTCCTCACCTGGCCCATGTGCAGGCAGTT
CTCCAGCCCAATTACCTCGATGAGCCGATCTCCAAAGTCCTGAATGGCCA
CCGAGAGGTCCACGGAATTGAAGCTGGTGGCGGAGAACTCCTTGTCGCCG
GCGCGTAGTTTCTTACTCTTGCCGAAGGGGCCGGCACTCTTGCGGATCCG
TTTCTGAGACAGGTGCTCGCCCCACAGGTTGGAACCGCCGTGTGTGTACG
GGATGTTGAGCAGAGCCACTCCCTGCAAGTGGGGTCCGTTGGCCAAGTCC
AGGGCCACGCCATCGCACACAATCTCGATGCTCTCGTGGAGATTCTTGCA
GGATGCCGCAAATGTCTCGGATGTTGCATACTCGAAGTACCACAGCTTGT
TCTTCATGCGGCTGTTGAATTTGTGCGGGTTCTTCTCACGCTCCAGGTGG
AACTTGACGCAGATGGCGGCGTCCACGCCGACGGAGAAATAATTGTTGAT
TATGTTGTAGGGCACCGTGCAGTCCTT
BS13783.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:45:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18654-PB | 3063 | Dgk-RB | 2353..3063 | 727..17 | 3455 | 99.4 | Minus |
| CG18654-PA | 2376 | Dgk-RA | 1666..2376 | 727..17 | 3455 | 99.4 | Minus |
| CG18654-PD | 1542 | Dgk-RD | 832..1542 | 727..17 | 3455 | 99.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:59:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgk-RK | 4214 | CG34361-RK | 3171..3881 | 727..17 | 3495 | 99.4 | Minus |
| Dgk-RI | 2923 | CG34361-RI | 1977..2687 | 727..17 | 3495 | 99.4 | Minus |
| Dgk-RH | 6282 | CG34361-RH | 3561..4271 | 727..17 | 3495 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:59:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7837246..7837475 | 289..518 | 1150 | 100 | Plus |
| 2R | 25286936 | 2R | 7836981..7837163 | 107..289 | 885 | 98.9 | Plus |
| 2R | 25286936 | 2R | 7837588..7837744 | 518..674 | 785 | 100 | Plus |
| 2R | 25286936 | 2R | 7836823..7836913 | 17..107 | 425 | 97.8 | Plus |
| 2R | 25286936 | 2R | 7843012..7843066 | 673..727 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:59:14 has no hits.
BS13783.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:44:10 Download gff for
BS13783.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18654-PD | 832..1542 | 17..727 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:40:17 Download gff for
BS13783.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgk-RJ | 3171..3881 | 17..727 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:32:36 Download gff for
BS13783.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgk-RH | 3561..4271 | 17..727 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:32:36 Download gff for
BS13783.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7836823..7836912 | 17..106 | 97 | <- | Plus |
| 2R | 7836981..7837162 | 107..288 | 98 | <- | Plus |
| 2R | 7837246..7837474 | 289..517 | 100 | <- | Plus |
| 2R | 7837588..7837743 | 518..673 | 100 | <- | Plus |
| 2R | 7843013..7843066 | 674..727 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:40:17 Download gff for
BS13783.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3724328..3724417 | 17..106 | 97 | <- | Plus |
| arm_2R | 3724486..3724667 | 107..288 | 98 | <- | Plus |
| arm_2R | 3724751..3724979 | 289..517 | 100 | <- | Plus |
| arm_2R | 3725093..3725248 | 518..673 | 100 | <- | Plus |
| arm_2R | 3730518..3730571 | 674..727 | 100 | | Plus |
BS13783.5prime Sequence
711 bp (663 high quality bases) assembled on 2006-10-13
> BS13783.5prime
GAAGTTATCAGTCGACATGAGATGGGAACTTCGTTATGGCTGGCAAATTG
TCACGTTCCGAACAAATTGCGCTACTGCTGCCGCCGTTGCATGCCACCAA
CTTTTGTGTCCTGTGTCTTTGACAAGTGCAGTGGAGATAATGCCGAATTC
CTTTCCGCCAGAGGGTCGTCGGCGGGAGCGAAGGTCGGGAAACTTGGTCC
TTCGAGCCGGATGCTGCTGCATCGGCAAATACTTTCTCCACAACCGCTGC
GCCTCGTCGGTGAAGAAGGAGTGCACCTTGGGCGAATACTCCGAGCTAAT
TGTCCCGCCCACGGCCATCTGCCCGGCGGTACTCGACCGCCAGCGATCCG
TGAATCAGGCTCACAAGGCCACGCACTTCCAAATCACGCCGCCGGACGAG
CTGAGCTGCCCGCTGCTGGTGTTCGTCAATCCGAAGAGCGGCGGTCGCCA
GGGGGATCGCATCCTGCGGAAGTTCCAGTACATGCTCAATCCGCGCCAGG
TGTACGACCTGTCCAAGGGCGGGCCCAAGGAGGGACTCACACTCTTCAAG
GACCTGCCTCGCTTCAGGGTCATTTGCTGTGGCGGCGACGGCACCGTCGG
CTGGGTTTTGGAAGCCATGGACTCCATAGAGTTGGCCAGCCAGCCGGCCA
TCGGAGTGATTCCCCTGGGAAACGGGCACGACCTGGCTCGCTGTCTCCGC
TGGGGCGGTGG
BS13783.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:45:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18654-PA | 2376 | Dgk-RA | 1..695 | 17..711 | 3400 | 99.7 | Plus |
| CG18654-PB | 3063 | Dgk-RB | 1037..1382 | 366..711 | 1655 | 99.4 | Plus |
| CG18654-PB | 3063 | Dgk-RB | 883..1014 | 236..367 | 660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:59:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgk-RG | 3152 | CG34361-RG | 442..1138 | 15..711 | 3440 | 99.7 | Plus |
| Dgk-RK | 4214 | CG34361-RK | 1725..2200 | 236..711 | 2335 | 99.6 | Plus |
| Dgk-RH | 6282 | CG34361-RH | 2115..2590 | 236..711 | 2335 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7846756..7846976 | 235..15 | 1105 | 100 | Minus |
| 2R | 25286936 | 2R | 7845033..7845205 | 534..362 | 850 | 99.4 | Minus |
| 2R | 25286936 | 2R | 7845738..7845870 | 368..236 | 665 | 100 | Minus |
| 2R | 25286936 | 2R | 7844886..7844973 | 620..533 | 440 | 100 | Minus |
| 2R | 25286936 | 2R | 7844666..7844757 | 711..620 | 400 | 95.7 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:59:27 has no hits.
BS13783.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:44:11 Download gff for
BS13783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18654-PA | 1..695 | 17..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:40:23 Download gff for
BS13783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgk-RG | 439..1138 | 9..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:33:52 Download gff for
BS13783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgk-RG | 439..1138 | 9..711 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:33:52 Download gff for
BS13783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7844666..7844756 | 621..711 | 97 | <- | Minus |
| 2R | 7844886..7844972 | 534..620 | 100 | <- | Minus |
| 2R | 7845034..7845199 | 368..533 | 100 | <- | Minus |
| 2R | 7845739..7845870 | 236..367 | 100 | <- | Minus |
| 2R | 7846756..7846979 | 9..235 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:40:23 Download gff for
BS13783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3732171..3732261 | 621..711 | 97 | <- | Minus |
| arm_2R | 3732391..3732477 | 534..620 | 100 | <- | Minus |
| arm_2R | 3732539..3732704 | 368..533 | 100 | <- | Minus |
| arm_2R | 3733244..3733375 | 236..367 | 100 | <- | Minus |
| arm_2R | 3734261..3734484 | 9..235 | 98 | | Minus |
BS13783.pep Sequence
Translation from 16 to 2391
> BS13783.pep
MRWELRYGWQIVTFRTNCATAAAVACHQLLCPVSLTSAVEIMPNSFPPEG
RRRERRSGNLVLRAGCCCIGKYFLHNRCASSVKKECTLGEYSELIVPPTA
ICPAVLDRQRSVNQAHKATHFQITPPDELSCPLLVFVNPKSGGRQGDRIL
RKFQYMLNPRQVYDLSKGGPKEGLTLFKDLPRFRVICCGGDGTVGWVLEA
MDSIELASQPAIGVIPLGTGNDLARCLRWGGGYEGENIPKLMDKFRRAST
VMLDRWSIEVTNTPHSDDMRPKVTLHSNMQKVIELSQSVVVDKSLMERFE
EIQRQSKQVATSMGTAASSTSIMMASKTETEMETMATMEFGSSTTTTNRT
TTTKSISMSTFETQCLQQTLRTAMSSSSSNTSSGSPCNGNQDAETEVDSH
AAAAADVREKSVPRRSGETEKQSLETLLLQHKQQMQQQQQQQQQGVTSLA
VEEAATATPVGSNQSDNSSQRNKQNNILKQQITLSLDLSDHEDEPKDDGG
GAGDGTKSNGNSIPATPATPITPTTPNAASSVLQQQQQQHLQFEQQQKPI
KVQSDKDCTVPYNIINNYFSVGVDAAICVKFHLEREKNPHKFNSRMKNKL
WYFEYATSETFAASCKNLHESIEIVCDGVALDLANGPHLQGVALLNIPYT
HGGSNLWGEHLSQKRIRKSAGPFGKSKKLRAGDKEFSATSFNSVDLSVAI
QDFGDRLIEVIGLENCLHMGQVRTGLRASGRRLAQCSEVIIKTKKTFPMQ
IDGEPWMQMPCTIKVTHKNQVPMLMAPRSEKGRGFFNLLCS*
BS13783.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgk-PG | 791 | CG34361-PG | 1..791 | 1..791 | 4129 | 100 | Plus |
| Dgk-PI | 747 | CG34361-PI | 1..747 | 1..791 | 3842 | 94.4 | Plus |
| Dgk-PK | 1100 | CG34361-PK | 383..1100 | 74..791 | 3727 | 100 | Plus |
| Dgk-PH | 1230 | CG34361-PH | 513..1230 | 74..791 | 3727 | 100 | Plus |
| Dgk-PJ | 1139 | CG34361-PJ | 383..1100 | 74..791 | 3727 | 100 | Plus |
