Clone Sequence Records
BS13851.complete Sequence
458 bp assembled on 2010-02-09
GenBank Submission: KX804015
> BS13851.complete
GAAGTTATCAGTCGACATGGGACCTAGAAGCTGTACGCACTTCGCCACGC
TGTTTATGCCACTCTGGGCATTAGCCTTCTGCTTCCTGGTGGTGCTGCCG
ATCCCAGCGCAGACGACTAGTCTACAGAACGCTAAGGATGATCGGCGACT
ACAGGAATTGGAGTCAAAAATTGGTGGGGAAATCGATCAGCCCATTGCGA
ATTTAGTTGGACCATCATTCTCTCTATTCGGGGACAGGCGTAATCAGAAA
ACAATGAGCTTCGGTCGCAGAGTGCCACTAATTTCACGCCCAATAATACC
AATTGAGCTGGATCTCCTCATGGATAATGATGACGAAAGAACGAAAGCTA
AGCGGTTTGATGATTACGGCCATATGAGGTTTGGTAAAAGGGGAGGTGAT
GATCAGTTCGATGACTACGGTCACATGCGTTTCGGCCGATAAAAGCTTTC
TAGACCAT
BS13851.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:22:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsk-RA | 426 | CG18090-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsk-RA | 569 | CG18090-RA | 27..454 | 16..443 | 2140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4189807..4190234 | 443..16 | 2140 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:22:59 has no hits.
BS13851.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:15:56 Download gff for
BS13851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dsk-RA | 1..426 | 17..442 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:36 Download gff for
BS13851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dsk-RA | 216..639 | 17..440 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:00 Download gff for
BS13851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dsk-RA | 28..451 | 17..440 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:48:34 Download gff for
BS13851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dsk-RA | 216..639 | 17..440 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:14 Download gff for
BS13851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dsk-RA | 28..451 | 17..440 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:14 Download gff for
BS13851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4189810..4190233 | 17..440 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:00 Download gff for
BS13851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15532..15955 | 17..440 | 100 | | Minus |
BS13851.5prime Sequence
456 bp (456 high quality bases) assembled on 2006-10-13
> BS13851.5prime
GAAGTTATCAGTCGACATGGGACCTAGAAGCTGTACGCACTTCGCCACGC
TGTTTATGCCACTCTGGGCATTAGCCTTCTGCTTCCTGGTGGTGCTGCCG
ATCCCAGCGCAGACGACTAGTCTACAGAACGCTAAGGATGATCGGCGACT
ACAGGAATTGGAGTCAAAAATTGGTGGGGAAATCGATCAGCCCATTGCGA
ATTTAGTTGGACCATCATTCTCTCTATTCGGGGACAGGCGTAATCAGAAA
ACAATGAGCTTCGGTCGCAGAGTGCCACTAATTTCACGCCCAATAATACC
AATTGAGCTGGATCTCCTCATGGATAATGATGACGAAAGAACGAAAGCTA
AGCGGTTTGATGATTACGGCCATATGAGGTTTGGTAAAAGGGGAGGTGAT
GATCAGTTCGATGACTACGGTCACATGCGTTTCGGCCGATAAAAGCTTTC
TAGACC
BS13851.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:54:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18090-PA | 426 | Dsk-RA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:01:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsk-RA | 569 | CG18090-RA | 27..454 | 16..443 | 2140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:01:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4189807..4190234 | 443..16 | 2140 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:01:25 has no hits.
BS13851.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:44:55 Download gff for
BS13851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18090-PA | 1..426 | 17..442 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:41:10 Download gff for
BS13851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dsk-RA | 19..459 | 9..448 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:11:19 Download gff for
BS13851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dsk-RA | 19..459 | 9..448 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:11:19 Download gff for
BS13851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4189802..4190242 | 9..448 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:41:10 Download gff for
BS13851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15524..15964 | 9..448 | 98 | | Minus |
BS13851.pep Sequence
Translation from 16 to 441
> BS13851.pep
MGPRSCTHFATLFMPLWALAFCFLVVLPIPAQTTSLQNAKDDRRLQELES
KIGGEIDQPIANLVGPSFSLFGDRRNQKTMSFGRRVPLISRPIIPIELDL
LMDNDDERTKAKRFDDYGHMRFGKRGGDDQFDDYGHMRFGR*
BS13851.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:04:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsk-PA | 141 | CG18090-PA | 1..141 | 1..141 | 751 | 100 | Plus |
