Clone Sequence Records
BS13867.complete Sequence
1517 bp assembled on 2009-12-07
GenBank Submission: KX800329
> BS13867.complete
GAAGTTATCAGTCGACATGAAGCATTGTTGGGCAATCGGAACTCTACTCT
TAGCAAGTGTCCTTATGGGCAATGCCTGTCGACATACTTGCGTTACCCGG
AATTTTTGTTTGTATGAGGAACCAACATTTGATTACCGCTCCAGTAATTG
CGGCAATACCAAAATTTGCTGTGCAGTTCTACGAAAGCCTGGAGGTACGG
TTTTAATTGAACCAAATGGCCCCGAAGATGATAAGGTTGGAGTAAACGGA
ATAAATGCACAACTATCGCCTACACGCGAACTCACTAGAGATCGCCCAAA
TACCATTGAGTCACAAGTAAAGGAAATCAACGACTTCAGTGGGCGTCCAA
CCAACAACGAAAGGAATCCAGCAACCGAACCGAACAACGGCGGGTATACA
ACACCCAACGGTGGGTATCCAGTAAACAACGGTGGGTATCCAGTAAACAA
CGGTGGGTATCCATCAAACAACGGTGGGTATCCATCAAACAACGGTGGGT
ATCCAGTAAACAACGGTGGGTATCCAGTAAACAACGGTGGGTATCCAGCA
AACAACGGTGGGTATCCAGCAAACAACGGTGGGTATCCAACAACCAACGT
TGGAAATCCAACAAACAACGGAGGGAACCCGACTACCAATTTTGGAAATC
CAACAAACAACGGAGGGAACCCGACTACCAATGTTGGAAGCTCAGAGCTT
TTGTCACCAAGTTGCGGCATGAGCAACGCAAATGGCTTGCAAATGGTAGA
AGGAATAACCATTGATCAAGCACGACCAGCTCAATATCCCTGGGCTGTTG
CTATTTTTCACAATGGACAGTACTTGGCTGGCGGATCCCTGATTCAACCA
AATGTCGTTCTAACAGTAGCTCACCGGGTAATTACAATCGAAACCGAACT
TGTGGTCAGGGCCGGCGATTGGGACTTAAAATCCGATCGAGAGATATTTT
TGTCTGAGCAGCGCGAAGTTGAAAGGGCAGTAATCCATGAAGGATTTGAC
TTCAAATCAGGTGCCAACAACTTGGCGTTACTTTTCCTAAATTCGCCCTT
CAAACTGAATGATCACATCAGAACTATCTGTTTGCCTACACCAAATAAAT
CGTTCGCAGGACGTCGTTGCACGGTGGCCGGTTGGGGAAAAATGAGATAC
GAGGATCAACGATACTCCACCGTCCTGAAGAAAGTTCAGTTGCTCGTGGT
AAATCGAAATGTTTGCGAGAAGTTCTTGAGGTCGACCAGGTTGGGCGCTA
AATTTGAGCTGCCCAAGAACATCATTTGCGCCGGAGGCGAGTTAGGCCGC
GATACCTGCACCGGTGATGGAGGATCGGCCCTATTCTGTTCAATCGGAGG
GGAGAACTCTGGTGTGTACGAGCAGGCTGGAATAGTAAACTGGGGCGTTG
GGTGCGGGCAGGAGGGCATTCCGGCCATATATACGGAGGTGTCCAAGTTT
ACAAATTGGATTACCGAGAAGCTGCTGCCCTTCGATTACAGGAGTGGGTG
AAAGCTTTCTAGACCAT
BS13867.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPH93-RA | 1485 | CG6639-PA | 1..1485 | 17..1501 | 7425 | 100 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 367..631 | 425..689 | 875 | 88.7 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 409..673 | 383..647 | 875 | 88.7 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 367..583 | 446..662 | 620 | 85.7 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 430..646 | 383..599 | 620 | 85.7 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 367..589 | 467..689 | 605 | 84.8 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 451..673 | 383..605 | 605 | 84.8 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 367..504 | 488..625 | 450 | 88.4 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 472..609 | 383..520 | 450 | 88.4 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 367..483 | 509..625 | 360 | 87.2 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 493..609 | 383..499 | 360 | 87.2 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 367..462 | 530..625 | 270 | 85.4 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 514..609 | 383..478 | 270 | 85.4 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 367..483 | 551..667 | 180 | 76.9 | Plus |
| SPH93-RA | 1485 | CG6639-PA | 535..651 | 383..499 | 180 | 76.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPH93-RA | 1587 | CG6639-RA | 26..1512 | 15..1501 | 7435 | 100 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..658 | 425..689 | 875 | 88.7 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 436..700 | 383..647 | 875 | 88.7 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..610 | 446..662 | 620 | 85.7 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 457..673 | 383..599 | 620 | 85.7 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..616 | 467..689 | 605 | 84.8 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 478..700 | 383..605 | 605 | 84.8 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..531 | 488..625 | 450 | 88.4 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 499..636 | 383..520 | 450 | 88.4 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..510 | 509..625 | 360 | 87.2 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 520..636 | 383..499 | 360 | 87.2 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..489 | 530..625 | 270 | 85.4 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 541..636 | 383..478 | 270 | 85.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17454338..17455655 | 1501..184 | 6590 | 100 | Minus |
| 2L | 23513712 | 2L | 17455150..17455414 | 647..383 | 875 | 88.7 | Minus |
| 2L | 23513712 | 2L | 17455192..17455456 | 689..425 | 875 | 88.7 | Minus |
| 2L | 23513712 | 2L | 17455726..17455898 | 187..15 | 865 | 100 | Minus |
| 2L | 23513712 | 2L | 17455240..17455456 | 662..446 | 620 | 85.7 | Minus |
| 2L | 23513712 | 2L | 17455177..17455393 | 599..383 | 620 | 85.7 | Minus |
| 2L | 23513712 | 2L | 17455150..17455372 | 605..383 | 605 | 84.8 | Minus |
| 2L | 23513712 | 2L | 17455234..17455456 | 689..467 | 605 | 84.8 | Minus |
| 2L | 23513712 | 2L | 17455319..17455456 | 625..488 | 450 | 88.4 | Minus |
| 2L | 23513712 | 2L | 17455214..17455351 | 520..383 | 450 | 88.4 | Minus |
| 2L | 23513712 | 2L | 17455214..17455330 | 499..383 | 360 | 87.2 | Minus |
| 2L | 23513712 | 2L | 17455340..17455456 | 625..509 | 360 | 87.2 | Minus |
| 2L | 23513712 | 2L | 17455214..17455309 | 478..383 | 270 | 85.4 | Minus |
| 2L | 23513712 | 2L | 17455361..17455456 | 625..530 | 270 | 85.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:08:36 has no hits.
BS13867.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:46:07 Download gff for
BS13867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6639-RA | 22..1505 | 17..1500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:02 Download gff for
BS13867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6639-RA | 28..1511 | 17..1500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:06:29 Download gff for
BS13867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6639-RA | 22..1505 | 17..1500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:55 Download gff for
BS13867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SPH93-RA | 28..1511 | 17..1500 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:55 Download gff for
BS13867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17454339..17455651 | 188..1500 | 100 | <- | Minus |
| 2L | 17455726..17455896 | 17..187 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:02 Download gff for
BS13867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17454339..17455651 | 188..1500 | 100 | <- | Minus |
| arm_2L | 17455726..17455896 | 17..187 | 100 | | Minus |
BS13867.3prime Sequence
636 bp (592 high quality bases) assembled on 2006-10-13
> BS13867.3prime
ATGGTCTAGAAAGCTTTCACCCACTCCTGTAATCGAAGGGCAGCAGCTTC
TCGGTAATCCAATTTGTAAACTTGGACACCTCCGTATATATGGCCGGAAT
GCCCTCCTGCCCGCACCCAACGCCCCAGTTTACTATTCCAGCCTGCTCGT
ACACACCAGAGTTCTCCCCTCCGATTGAACAGAATAGGGCCGATCCTCCA
TCACCGGTGCAGGTATCGCGGCCTAACTCGCCTCCGGCGCAAATGATGTT
CTTGGGCAGCTCAAATTTAGCGCCCAACCTGGTCGACCTCAAGAACTTCT
CGCAAACATTTCGATTTACCACGAGCAACTGAACTTTCTTCAGGACGGTG
GAGTATCGTTGATCCTCGTATCTCATTTTTCCCCAACCGGCCACCGTGCA
ACGACGTCCTGCGAACGATTTATTTGGTGTAGGCAAACAGATAGTTCTGA
TGTGATCATTCAGTTTGAAGGGCGAATTTAGGAAAAGTAACGCCAAGTTG
TTGGCACCTGATTTGAAGTCAAATCCTTCATGGATTACTGCCCTTTCAAC
TTCGCGCTGCTCAGACAAAAATATCTCTCGATCGGATTTTAAGTCCCAAT
CGCCGGCCCTGACCACAAGTTCGGTTTCGATTGTAA
BS13867.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:57:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6639-PA | 1485 | CG6639-RA | 866..1485 | 636..17 | 3100 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPH93-RA | 1587 | CG6639-RA | 893..1512 | 636..17 | 3100 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17454338..17454957 | 17..636 | 3100 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:25:45 has no hits.
BS13867.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:45:07 Download gff for
BS13867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6639-PA | 868..1485 | 17..634 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 06:52:35 Download gff for
BS13867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6639-RA | 893..1518 | 9..636 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:51:19 Download gff for
BS13867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SPH93-RA | 893..1518 | 9..636 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:51:19 Download gff for
BS13867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17454332..17454957 | 9..636 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 06:52:35 Download gff for
BS13867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17454332..17454957 | 9..636 | 99 | | Plus |
BS13867.5prime Sequence
687 bp (634 high quality bases) assembled on 2006-10-13
> BS13867.5prime
GAAGTTATCAGTCGACATGAAGCATTGTTGGGCAATCGGAACTCTACTCT
TAGCAAGTGTCCTTATGGGCAATGCCTGTCGACATACTTGCGTTACCCGG
AATTTTTGTTTGTATGAGGAACCAACATTTGATTACCGCTCCAGTAATTG
CGGCAATACCAAAATTTGCTGTGCAGTTCTACGAAAGCCTGGAGGTACGG
TTTTAATTGAACCAAATGGCCCCGAAGATGATAAGGTTGGAGTAAACGGA
ATAAATGCACAACTATCGCCTACACGCGAACTCACTAGAGATCGCCCAAA
TACCATTGAGTCACAAGTAAAGGAAATCAACGACTTCAGTGGGCGTCCAA
CCAACAACGAAAGGAATCCAGCAACCGAACCGAACAACGGCGGGTATACA
ACACCCAACGGTGGGTATCCAGTAAACAACGGTGGGTATCCAGTAAACAA
CGGTGGGTATCCATCAAACAACGGTGGGTATCCATCAAACAACGGTGGGT
ATCCAGTAAACAACGGTGGGTATCCAGTAAACAACGGTGGGTATCCAGCA
AACAACGGTGGGTATCCAGCAAACAACGGTGGGTATCCAACAACCAACGT
TGGAAATCCAACAAACAACGGAGGGAACCCGACTACCAATTTTGGAAATC
CAACAAACAACGGAGGGAACCCAACTACCAATGTTGG
BS13867.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 22:57:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6639-PA | 1485 | CG6639-RA | 1..671 | 17..687 | 3330 | 99.8 | Plus |
| CG6639-PA | 1485 | CG6639-RA | 626..673 | 600..647 | 215 | 97.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPH93-RA | 1587 | CG6639-RA | 26..698 | 15..687 | 3350 | 99.9 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 457..700 | 383..647 | 645 | 83.4 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..623 | 446..675 | 625 | 84.8 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..614 | 467..687 | 610 | 85.1 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 478..700 | 383..605 | 605 | 84.8 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..531 | 488..625 | 450 | 88.4 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 499..636 | 383..520 | 450 | 88.4 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..510 | 509..625 | 360 | 87.2 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 520..636 | 383..499 | 360 | 87.2 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..489 | 530..625 | 270 | 85.4 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 541..636 | 383..478 | 270 | 85.4 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 394..510 | 551..667 | 180 | 76.9 | Plus |
| SPH93-RA | 1587 | CG6639-RA | 562..678 | 383..499 | 180 | 76.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17455152..17455655 | 687..184 | 2505 | 99.8 | Minus |
| 2L | 23513712 | 2L | 17455150..17455414 | 647..383 | 875 | 88.7 | Minus |
| 2L | 23513712 | 2L | 17455726..17455898 | 187..15 | 865 | 100 | Minus |
| 2L | 23513712 | 2L | 17455194..17455456 | 687..425 | 850 | 88.2 | Minus |
| 2L | 23513712 | 2L | 17455227..17455456 | 675..446 | 625 | 84.8 | Minus |
| 2L | 23513712 | 2L | 17455177..17455393 | 599..383 | 620 | 85.7 | Minus |
| 2L | 23513712 | 2L | 17455236..17455456 | 687..467 | 610 | 85.1 | Minus |
| 2L | 23513712 | 2L | 17455150..17455372 | 605..383 | 605 | 84.8 | Minus |
| 2L | 23513712 | 2L | 17455214..17455351 | 520..383 | 450 | 88.4 | Minus |
| 2L | 23513712 | 2L | 17455319..17455456 | 625..488 | 450 | 88.4 | Minus |
| 2L | 23513712 | 2L | 17455214..17455330 | 499..383 | 360 | 87.2 | Minus |
| 2L | 23513712 | 2L | 17455340..17455456 | 625..509 | 360 | 87.2 | Minus |
| 2L | 23513712 | 2L | 17455214..17455309 | 478..383 | 270 | 85.4 | Minus |
| 2L | 23513712 | 2L | 17455361..17455456 | 625..530 | 270 | 85.4 | Minus |
| 2L | 23513712 | 2L | 17455172..17455288 | 499..383 | 180 | 76.9 | Minus |
| 2L | 23513712 | 2L | 17455340..17455456 | 667..551 | 180 | 76.9 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:53:31 has no hits.
BS13867.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:45:07 Download gff for
BS13867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6639-PA | 1..671 | 17..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:50:23 Download gff for
BS13867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6639-RA | 21..698 | 10..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:38:39 Download gff for
BS13867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SPH93-RA | 21..698 | 10..687 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:38:39 Download gff for
BS13867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17455152..17455651 | 188..687 | 99 | <- | Minus |
| 2L | 17455726..17455903 | 10..187 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:50:23 Download gff for
BS13867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17455152..17455651 | 188..687 | 99 | <- | Minus |
| arm_2L | 17455726..17455903 | 10..187 | 98 | | Minus |
BS13867.pep Sequence
Translation from 16 to 1500
> BS13867.pep
MKHCWAIGTLLLASVLMGNACRHTCVTRNFCLYEEPTFDYRSSNCGNTKI
CCAVLRKPGGTVLIEPNGPEDDKVGVNGINAQLSPTRELTRDRPNTIESQ
VKEINDFSGRPTNNERNPATEPNNGGYTTPNGGYPVNNGGYPVNNGGYPS
NNGGYPSNNGGYPVNNGGYPVNNGGYPANNGGYPANNGGYPTTNVGNPTN
NGGNPTTNFGNPTNNGGNPTTNVGSSELLSPSCGMSNANGLQMVEGITID
QARPAQYPWAVAIFHNGQYLAGGSLIQPNVVLTVAHRVITIETELVVRAG
DWDLKSDREIFLSEQREVERAVIHEGFDFKSGANNLALLFLNSPFKLNDH
IRTICLPTPNKSFAGRRCTVAGWGKMRYEDQRYSTVLKKVQLLVVNRNVC
EKFLRSTRLGAKFELPKNIICAGGELGRDTCTGDGGSALFCSIGGENSGV
YEQAGIVNWGVGCGQEGIPAIYTEVSKFTNWITEKLLPFDYRSG*
BS13867.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:07:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPH93-PA | 494 | CG6639-PA | 1..494 | 1..494 | 2698 | 100 | Plus |
| CG14990-PA | 322 | CG14990-PA | 23..301 | 214..486 | 703 | 50 | Plus |
| CG18478-PA | 294 | CG18478-PA | 31..284 | 233..486 | 663 | 47.8 | Plus |
| CG31827-PA | 294 | CG31827-PA | 31..284 | 233..486 | 663 | 47.8 | Plus |
| CG3117-PB | 347 | CG3117-PB | 96..332 | 250..486 | 606 | 49.2 | Plus |
