Clone Sequence Records
BS13910.3prime Sequence
495 bp (495 high quality bases) assembled on 2006-10-13
> BS13910.3prime
ATGGTCTAGAAAGCTTCTACGGCATGCCGCCCAGTCGCTTGTAGTCGATC
TTCTCGAGCTGCACGAGTGGCTTTAGTTGCTCGGCAAACACGCGCATTTC
CTCGCCGACATTCTCCTGCCCCGTTGGCGCCACCACAGAGAGTTCCACTA
TGTAGCTTTGTGAGATTGGCTCGTTGGCCATGTCCTGCTGCTTGCCGGGC
ACAATCTTAATGAGCTTGGAGACGGTAATCTTCATGCGCCCCTTGCGGAA
CATATAGCCCTTTGCTATGTACTCGAACTCCAGGCGGAAGCCCATTTCCG
TGAGGAATTCCAAAATGCCATTGGTGCAGGCGCAGTCCATGCAGCTGCGT
ACCAATGTAGGCCGGCGCAGATCCACCTCGGGGTTTCCTAGGTAGCGCAT
CTGAAAGGGTGCATCGCGACCAAGGGCTCGGCGCACGCGAAGAAGCAGCG
GCTGGTTGGCATTGGGCTGGCGAAGGCTCATGTCGACTGATAACT
BS13910.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:42:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14802-PA | 654 | MED18-RA | 190..654 | 481..17 | 2325 | 100 | Minus |
CG14802-PB | 465 | MED18-RB | 1..465 | 481..17 | 2325 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:14:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED18-RC | 865 | CG14802-RC | 318..782 | 481..17 | 2325 | 100 | Minus |
MED18-RA | 842 | CG14802-RA | 295..759 | 481..17 | 2325 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:14:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1866562..1866804 | 259..17 | 1215 | 100 | Minus |
X | 23542271 | X | 1866273..1866496 | 481..258 | 1120 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-02 18:14:14 has no hits.
BS13910.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:45:32 Download gff for
BS13910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14802-PB | 1..465 | 17..481 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:41:53 Download gff for
BS13910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RA | 291..762 | 10..487 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:14:17 Download gff for
BS13910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RA | 291..762 | 10..487 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:14:17 Download gff for
BS13910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1866269..1866495 | 259..487 | 98 | -> | Minus |
X | 1866563..1866807 | 10..258 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:41:53 Download gff for
BS13910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1760302..1760528 | 259..487 | 98 | -> | Minus |
arm_X | 1760596..1760840 | 10..258 | 98 | | Minus |
BS13910.5prime Sequence
495 bp (495 high quality bases) assembled on 2006-10-13
> BS13910.5prime
GAAGTTATCAGTCGACATGAGCCTTCGCCAGCCCAATGCCAACCAGCCGC
TGCTTCTTCGCGTGCGCCGAGCCCTTGGTCGCGATGCACCCTTTCAGATG
CGCTACCTAGGAAACCCCGAGGTGGATCTGCGCCGGCCTACATTGGTACG
CAGCTGCATGGACTGCGCCTGCACCAATGGCATTTTGGAATTCCTCACGG
AAATGGGCTTCCGCCTGGAGTTCGAGTACATAGCAAAGGGCTATATGTTC
CGCAAGGGGCGCATGAAGATTACCGTCTCCAAGCTCATTAAGATTGTGCC
CGGCAAGCAGCAGGACATGGCCAACGAGCCAATCTCACAAAGCTACATAG
TGGAACTCTCTGTGGTGGCGCCAACGGGGCAGGAGAATGTCGGCGAGGAA
ATGCGCGTGTTTGCCGAGCAACTAAAGCCACTCGTGCAGCTCGAGAAGAT
CGACTACAAGCGACTGGGCGGCATGCCGTAGAAGCTTTCTAGACC
BS13910.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:42:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14802-PA | 654 | MED18-RA | 190..654 | 17..481 | 2325 | 100 | Plus |
CG14802-PB | 465 | MED18-RB | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:43:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED18-RC | 865 | CG14802-RC | 318..782 | 17..481 | 2325 | 100 | Plus |
MED18-RA | 842 | CG14802-RA | 295..759 | 17..481 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:43:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1866562..1866804 | 239..481 | 1215 | 100 | Plus |
X | 23542271 | X | 1866273..1866496 | 17..240 | 1120 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:43:51 has no hits.
BS13910.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:45:32 Download gff for
BS13910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14802-PB | 1..465 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:31:08 Download gff for
BS13910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RA | 291..762 | 11..488 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:59 Download gff for
BS13910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RA | 291..762 | 11..488 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:59 Download gff for
BS13910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1866269..1866495 | 11..239 | 98 | -> | Plus |
X | 1866563..1866807 | 240..488 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:31:08 Download gff for
BS13910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1760596..1760840 | 240..488 | 98 | | Plus |
arm_X | 1760302..1760528 | 11..239 | 98 | -> | Plus |
BS13910.complete Sequence
497 bp assembled on 2006-11-01
> BS13910.complete
GAAGTTATCAGTCGACATGAGCCTTCGCCAGCCCAATGCCAACCAGCCGC
TGCTTCTTCGCGTGCGCCGAGCCCTTGGTCGCGATGCACCCTTTCAGATG
CGCTACCTAGGAAACCCCGAGGTGGATCTGCGCCGGCCTACATTGGTACG
CAGCTGCATGGACTGCGCCTGCACCAATGGCATTTTGGAATTCCTCACGG
AAATGGGCTTCCGCCTGGAGTTCGAGTACATAGCAAAGGGCTATATGTTC
CGCAAGGGGCGCATGAAGATTACCGTCTCCAAGCTCATTAAGATTGTGCC
CGGCAAGCAGCAGGACATGGCCAACGAGCCAATCTCACAAAGCTACATAG
TGGAACTCTCTGTGGTGGCGCCAACGGGGCAGGAGAATGTCGGCGAGGAA
ATGCGCGTGTTTGCCGAGCAACTAAAGCCACTCGTGCAGCTCGAGAAGAT
CGACTACAAGCGACTGGGCGGCATGCCGTAGAAGCTTTCTAGACCAT
BS13910.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:31:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED18-RA | 654 | CG14802-PA | 190..654 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:31:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED18-RC | 865 | CG14802-RC | 318..782 | 17..481 | 2325 | 100 | Plus |
MED18-RA | 842 | CG14802-RA | 295..759 | 17..481 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:31:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1866562..1866804 | 239..481 | 1215 | 100 | Plus |
X | 23542271 | X | 1866273..1866496 | 17..240 | 1120 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:31:12 has no hits.
BS13910.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:20:28 Download gff for
BS13910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RA | 186..654 | 11..481 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:52:10 Download gff for
BS13910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RC | 314..785 | 11..488 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:08:40 Download gff for
BS13910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RA | 295..759 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:20:28 Download gff for
BS13910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RC | 314..785 | 11..488 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:56 Download gff for
BS13910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED18-RA | 295..759 | 17..481 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:56 Download gff for
BS13910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1866273..1866495 | 17..239 | 100 | -> | Plus |
X | 1866563..1866804 | 240..481 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:08:40 Download gff for
BS13910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1760306..1760528 | 17..239 | 100 | -> | Plus |
arm_X | 1760596..1760837 | 240..481 | 100 | | Plus |
BS13910.pep Sequence
Translation from 16 to 480
> BS13910.pep
MSLRQPNANQPLLLRVRRALGRDAPFQMRYLGNPEVDLRRPTLVRSCMDC
ACTNGILEFLTEMGFRLEFEYIAKGYMFRKGRMKITVSKLIKIVPGKQQD
MANEPISQSYIVELSVVAPTGQENVGEEMRVFAEQLKPLVQLEKIDYKRL
GGMP*
BS13910.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:18:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED18-PA | 217 | CG14802-PA | 64..217 | 1..154 | 790 | 100 | Plus |