Clone Sequence Records
BS13921.5prime Sequence
381 bp (381 high quality bases) assembled on 2006-10-13
> BS13921.5prime
GAAGTTATCAGTCGACATGGCGATTGCGCAGGCGCGCAGGTCACTCATAC
GCCATGGACGCAGTGGTGGCGGCAAAAAGGGGATTAAGATATATATGATG
ATTTTCCTGACTAACCACTTTAGATCTTTGGCTACTTGGTTGTCACCTTA
CATCCCGTTTTTAATGATCCCCTCTAATATTTTTTGCATTTGCCACTGCT
TGCAAGTGACAAACACAACTGTACCTTCAATGGTGTTCAACTGTAGTTGT
ATTTACCGCCGTTATGGTGATTTGTCAGCAATTTTTAGCATGATTAATGA
ATGTTTCAATCCGGCGACACAACTCCCTCTTCCTCCAACCCACCGCTTTG
TTAGCCGAAATTCTTGAAAGCTTTCTAGACC
BS13921.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:42:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32160-PA | 351 | CG32160-RA | 1..351 | 17..367 | 1730 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-02 18:18:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:18:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16310066..16310416 | 17..367 | 1740 | 99.7 | Plus |
Blast to na_te.dros performed 2015-02-02 18:18:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2275..2348 | 190..118 | 115 | 63.5 | Minus |
BS13921.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:45:41 Download gff for
BS13921.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-PA | 1..351 | 17..367 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:14:43 Download gff for
BS13921.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310061..16310426 | 9..377 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:14:43 Download gff for
BS13921.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310061..16310426 | 9..377 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:42:10 Download gff for
BS13921.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303161..16303526 | 9..377 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:42:10 Download gff for
BS13921.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303161..16303526 | 9..377 | 97 | | Plus |
BS13921.3prime Sequence
381 bp (381 high quality bases) assembled on 2006-10-13
> BS13921.3prime
ATGGTCTAGAAAGCTTTCAAGAATTTCGGCTAACAAAGCGGTGGGTTGGA
GGAAGAGGGAGTTGTGTCGCCGGATTGAAACATTCATTAATCATGCTAAA
AATTGCTGACAAATCACCATAACGGCGGTAAATACAACTACAGTTGAACA
CCATTGAAGGTACAGTTGTGTTTGTCACTTGCAAGCAGTGGCAAATGCAA
AAAATATTAGAGGGGATCATTAAAAACGGGATGTAAGGTGACAACCAAGT
AGCCAAAGATCTAAAGTGGTTAGTCAGGAAAATCATCATATATATCTTAA
TCCCCTTTTTGCCGCCACCACTGCGTCCATGGCGTATGAGTGACCTGCGC
GCCTGCGCAATCGCCATGTCGACTGATAACT
BS13921.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:42:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32160-PA | 351 | CG32160-RA | 1..351 | 367..17 | 1730 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 17:51:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:51:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16310066..16310416 | 367..17 | 1740 | 99.7 | Minus |
Blast to na_te.dros performed 2015-02-10 17:51:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2275..2348 | 194..266 | 115 | 63.5 | Plus |
BS13921.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:45:41 Download gff for
BS13921.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-PA | 1..351 | 17..367 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:01:20 Download gff for
BS13921.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310061..16310426 | 7..375 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:01:20 Download gff for
BS13921.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310061..16310426 | 7..375 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:43:10 Download gff for
BS13921.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303161..16303526 | 7..375 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:43:10 Download gff for
BS13921.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303161..16303526 | 7..375 | 97 | | Minus |
BS13921.complete Sequence
383 bp assembled on 2006-11-01
GenBank Submission: FJ637554
> BS13921.complete
GAAGTTATCAGTCGACATGGCGATTGCGCAGGCGCGCAGGTCACTCATAC
GCCATGGACGCAGTGGTGGCGGCAAAAAGGGGATTAAGATATATATGATG
ATTTTCCTGACTAACCACTTTAGATCTTTGGCTACTTGGTTGTCACCTTA
CATCCCGTTTTTAATGATCCCCTCTAATATTTTTTGCATTTGCCACTGCT
TGCAAGTGACAAACACAACTGTACCTTCAATGGTGTTCAACTGTAGTTGT
ATTTACCGCCGTTATGGTGATTTGTCAGCAATTTTTAGCATGATTAATGA
ATGTTTCAATCCGGCGACACAACTCCCTCTTCCTCCAACCCACCGCTTTG
TTAGCCGAAATTCTTGAAAGCTTTCTAGACCAT
BS13921.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 13:43:16 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 13:43:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:43:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16310066..16310416 | 17..367 | 1740 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-27 13:43:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2275..2348 | 190..118 | 115 | 63.5 | Minus |
BS13921.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:45:26 Download gff for
BS13921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-RA | 1..351 | 17..367 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:31:21 Download gff for
BS13921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-RA | 881..1246 | 9..377 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:45:26 Download gff for
BS13921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32160-RA | 881..1246 | 9..377 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:25 Download gff for
BS13921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310066..16310415 | 17..366 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:25 Download gff for
BS13921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16310066..16310415 | 17..366 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:06 Download gff for
BS13921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303166..16303515 | 17..366 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:06 Download gff for
BS13921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16303166..16303515 | 17..366 | 99 | | Plus |
BS13921.pep Sequence
Translation from 16 to 366
> BS13921.pep
MAIAQARRSLIRHGRSGGGKKGIKIYMMIFLTNHFRSLATWLSPYIPFLM
IPSNIFCICHCLQVTNTTVPSMVFNCSCIYRRYGDLSAIFSMINECFNPA
TQLPLPPTHRFVSRNS*
Sequence BS13921.pep has no blast hits.