Clone Sequence Records
BS13950.3prime Sequence
360 bp (360 high quality bases) assembled on 2006-10-13
> BS13950.3prime
ATGGTCTAGAAAGCTTCTACTTGAGGGCCGAGGGCTGTGGGCAGCGGTAC
TTGGCCATTTCCACCTCCGCCTCGGCGTAGCTAAAGCGATTGAAGCTGTA
GTATTCAGGCACCTTGTAGCCACCGGTGGCGGAGGCACCTGGTCCAACGG
GTCCGCTGCTGGGCTTCACGCAATTGCTGGTCAGTCCCACAACCGATGGC
GAGGATGCGCCGCCCGATGGCGAGGATCCGGCTCCAGCTGGAGATCCTGA
GGCGCTGGGTCTACCGCCGCCGGAAACGGGTCCGCCCTTGATCTGGCTGT
AGCAGCGGCTGAGGGCTGGGCGCAGGGCACGTGAGGGCGAGAACATGTCG
ACTGATAACT
BS13950.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:43:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-PA | 330 | CG11752-RA | 1..330 | 346..17 | 1650 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-RA | 477 | CG11752-RA | 97..429 | 348..16 | 1665 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:58:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11350094..11350426 | 348..16 | 1665 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:58:02 has no hits.
BS13950.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:46:02 Download gff for
BS13950.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-PA | 1..330 | 17..346 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:32:51 Download gff for
BS13950.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 87..429 | 16..360 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:55:43 Download gff for
BS13950.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 87..429 | 16..360 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:55:43 Download gff for
BS13950.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11350084..11350426 | 16..360 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:32:51 Download gff for
BS13950.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11244117..11244459 | 16..360 | 98 | | Minus |
BS13950.5prime Sequence
360 bp (360 high quality bases) assembled on 2006-10-13
> BS13950.5prime
GAAGTTATCAGTCGACATGTTCTCGCCCTCACGTGCCCTGCGCCCAGCCC
TCAGCCGCTGCTACAGCCAGATCAAGGGCGGACCCGTTTCCGGCGGCGGT
AGACCCAGCGCCTCAGGATCTCCAGCTGGAGCCGGATCCTCGCCATCGGG
CGGCGCATCCTCGCCATCGGTTGTGGGACTGACCAGCAATTGCGTGAAGC
CCAGCAGCGGACCCGTTGGACCAGGTGCCTCCGCCACCGGTGGCTACAAG
GTGCCTGAATACTACAGCTTCAATCGCTTTAGCTACGCCGAGGCGGAGGT
GGAAATGGCCAAGTACCGCTGCCCACAGCCCTCGGCCCTCAAGTAGAAGC
TTTCTAGACC
BS13950.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:43:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-PA | 330 | CG11752-RA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:52:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-RA | 477 | CG11752-RA | 97..429 | 15..347 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:52:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11350094..11350426 | 15..347 | 1665 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:52:46 has no hits.
BS13950.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:46:02 Download gff for
BS13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-PA | 1..330 | 17..346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:43:18 Download gff for
BS13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 88..429 | 5..347 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:01:35 Download gff for
BS13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 88..429 | 5..347 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:01:35 Download gff for
BS13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11350085..11350426 | 5..347 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:43:18 Download gff for
BS13950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11244118..11244459 | 5..347 | 98 | | Plus |
BS13950.complete Sequence
362 bp assembled on 2006-11-01
GenBank Submission: FJ637562
> BS13950.complete
GAAGTTATCAGTCGACATGTTCTCGCCCTCACGTGCCCTGCGCCCAGCCC
TCAGCCGCTGCTACAGCCAGATCAAGGGCGGACCCGTTTCCGGCGGCGGT
AGACCCAGCGCCTCAGGATCTCCAGCTGGAGCCGGATCCTCGCCATCGGG
CGGCGCATCCTCGCCATCGGTTGTGGGACTGACCAGCAATTGCGTGAAGC
CCAGCAGCGGACCCGTTGGACCAGGTGCCTCCGCCACCGGTGGCTACAAG
GTGCCTGAATACTACAGCTTCAATCGCTTTAGCTACGCCGAGGCGGAGGT
GGAAATGGCCAAGTACCGCTGCCCACAGCCCTCGGCCCTCAAGTAGAAGC
TTTCTAGACCAT
BS13950.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:57:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-RA | 330 | CG11752-PA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-RA | 477 | CG11752-RA | 97..429 | 15..347 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:57:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11350094..11350426 | 15..347 | 1665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:57:29 has no hits.
BS13950.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:38:40 Download gff for
BS13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 1..330 | 17..346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:12:01 Download gff for
BS13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 87..428 | 5..347 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:42:03 Download gff for
BS13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 104..428 | 22..346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:38:40 Download gff for
BS13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 87..428 | 5..347 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:57 Download gff for
BS13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11752-RA | 104..428 | 22..346 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:57 Download gff for
BS13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11350101..11350425 | 22..346 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:42:03 Download gff for
BS13950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11244134..11244458 | 22..346 | 100 | | Plus |
BS13950.pep Sequence
Translation from 16 to 345
> BS13950.pep
MFSPSRALRPALSRCYSQIKGGPVSGGGRPSASGSPAGAGSSPSGGASSP
SVVGLTSNCVKPSSGPVGPGASATGGYKVPEYYSFNRFSYAEAEVEMAKY
RCPQPSALK*
BS13950.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:15:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11752-PA | 109 | CG11752-PA | 1..109 | 1..109 | 571 | 100 | Plus |
