Clone Sequence Records
BS14028.3prime Sequence
480 bp (480 high quality bases) assembled on 2006-10-13
> BS14028.3prime
ATGGTCTAGAAAGCTTTTATTCGTTTAATTTGTTTGTATTTTTACCCGCT
TCGGTGACCTCATCGCTCTGCTCGAAGCTTTCAGTTAGACAAGTCACCAT
CTTAAACGCATATTCGCAATGATCTTCTTCCTCATCGTAGATTTTCTTGC
AATCGTAGAGTATCTCTCGCAGTTCATCGCTCACGGGCTCAATTTGATCA
ATTTTATCCACATCCAAATAGCCATTGGTATCCAAAAGATTTCCCTTCTC
CGCTAGGCAATGGATGAAGCATTTGTATCTTCTGTCGGTATTCTCGAGGT
CATCCTCTTCGGAGCTGTTGCGATCGATGAGTTCCTGGAATTCAGCCTGG
CTGATGTTATTGCTGGCCAGGCAATCTGACACGTAATTGGTTTCCTCCAG
AAGTGAGAGACTCTGTATGGAGACCACGCTGACAGTCAAGATACATATTA
GCCATAGCTTAAGCATGTCGACTGATAACT
BS14028.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13421-PA | 450 | Obp57c-RA | 1..450 | 466..17 | 2250 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:43:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-RA | 557 | CG13421-RA | 84..533 | 466..17 | 2250 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:43:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20503781..20504178 | 414..17 | 1990 | 100 | Minus |
2R | 25286936 | 2R | 20503667..20503720 | 466..413 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:43:38 has no hits.
BS14028.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:46:58 Download gff for
BS14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13421-PA | 1..450 | 17..466 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:07:42 Download gff for
BS14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..533 | 17..466 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:45:11 Download gff for
BS14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..533 | 17..466 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:45:11 Download gff for
BS14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20503667..20503720 | 413..466 | 100 | -> | Minus |
2R | 20503783..20504178 | 17..412 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:07:42 Download gff for
BS14028.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16391172..16391225 | 413..466 | 100 | -> | Minus |
arm_2R | 16391288..16391683 | 17..412 | 100 | | Minus |
BS14028.5prime Sequence
480 bp (480 high quality bases) assembled on 2006-10-13
> BS14028.5prime
GAAGTTATCAGTCGACATGCTTAAGCTATGGCTAATATGTATCTTGACTG
TCAGCGTGGTCTCCATACAGAGTCTCTCACTTCTGGAGGAAACCAATTAC
GTGTCAGATTGCCTGGCCAGCAATAACATCAGCCAGGCTGAATTCCAGGA
ACTCATCGATCGCAACAGCTCCGAAGAGGATGACCTCGAGAATACCGACA
GAAGATACAAATGCTTCATCCATTGCCTAGCGGAGAAGGGAAATCTTTTG
GATACCAATGGCTATTTGGATGTGGATAAAATTGATCAAATTGAGCCCGT
GAGCGATGAACTGCGAGAGATACTCTACGATTGCAAGAAAATCTACGATG
AGGAAGAAGATCATTGCGAATATGCGTTTAAGATGGTGACTTGTCTAACT
GAAAGCTTCGAGCAGAGCGATGAGGTCACCGAAGCGGGTAAAAATACAAA
CAAATTAAACGAATAAAAGCTTTCTAGACC
BS14028.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13421-PA | 450 | Obp57c-RA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:30:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-RA | 557 | CG13421-RA | 84..533 | 17..466 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:30:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20503781..20504178 | 69..466 | 1990 | 100 | Plus |
2R | 25286936 | 2R | 20503667..20503720 | 17..70 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:30:45 has no hits.
BS14028.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:46:58 Download gff for
BS14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13421-PA | 1..450 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:42:47 Download gff for
BS14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..533 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:16:00 Download gff for
BS14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..533 | 17..466 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:16:00 Download gff for
BS14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20503667..20503720 | 17..70 | 100 | -> | Plus |
2R | 20503783..20504178 | 71..466 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:42:47 Download gff for
BS14028.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16391172..16391225 | 17..70 | 100 | -> | Plus |
arm_2R | 16391288..16391683 | 71..466 | 100 | | Plus |
BS14028.complete Sequence
482 bp assembled on 2006-11-01
> BS14028.complete
GAAGTTATCAGTCGACATGCTTAAGCTATGGCTAATATGTATCTTGACTG
TCAGCGTGGTCTCCATACAGAGTCTCTCACTTCTGGAGGAAACCAATTAC
GTGTCAGATTGCCTGGCCAGCAATAACATCAGCCAGGCTGAATTCCAGGA
ACTCATCGATCGCAACAGCTCCGAAGAGGATGACCTCGAGAATACCGACA
GAAGATACAAATGCTTCATCCATTGCCTAGCGGAGAAGGGAAATCTTTTG
GATACCAATGGCTATTTGGATGTGGATAAAATTGATCAAATTGAGCCCGT
GAGCGATGAACTGCGAGAGATACTCTACGATTGCAAGAAAATCTACGATG
AGGAAGAAGATCATTGCGAATATGCGTTTAAGATGGTGACTTGTCTAACT
GAAAGCTTCGAGCAGAGCGATGAGGTCACCGAAGCGGGTAAAAATACAAA
CAAATTAAACGAATAAAAGCTTTCTAGACCAT
BS14028.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-RA | 450 | CG13421-PA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:55:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-RA | 557 | CG13421-RA | 84..533 | 17..466 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:55:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20503781..20504178 | 69..466 | 1990 | 100 | Plus |
2R | 25286936 | 2R | 20503667..20503720 | 17..70 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:55:25 has no hits.
BS14028.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:38:14 Download gff for
BS14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RB | 1..450 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:11:32 Download gff for
BS14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RB | 53..502 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:02:27 Download gff for
BS14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..531 | 17..464 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:38:14 Download gff for
BS14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RB | 53..502 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:07 Download gff for
BS14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57c-RA | 84..531 | 17..464 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:07 Download gff for
BS14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20503667..20503720 | 17..70 | 100 | -> | Plus |
2R | 20503783..20504176 | 71..464 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:02:27 Download gff for
BS14028.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16391172..16391225 | 17..70 | 100 | -> | Plus |
arm_2R | 16391288..16391681 | 71..464 | 100 | | Plus |
BS14028.pep Sequence
Translation from 16 to 465
> BS14028.pep
MLKLWLICILTVSVVSIQSLSLLEETNYVSDCLASNNISQAEFQELIDRN
SSEEDDLENTDRRYKCFIHCLAEKGNLLDTNGYLDVDKIDQIEPVSDELR
EILYDCKKIYDEEEDHCEYAFKMVTCLTESFEQSDEVTEAGKNTNKLNE*
BS14028.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57c-PA | 149 | CG13421-PA | 1..149 | 1..149 | 777 | 100 | Plus |