Clone Sequence Records
BS14034.3prime Sequence
464 bp (455 high quality bases) assembled on 2006-10-13
> BS14034.3prime
ATGGTCTAGAAAGCTTCTAGGCCTTCGGGGCCAGGCTCTTCTGGATCTGG
GCCAGGTTCTCCTTCAGCAGACAGGTGGCTCCGCGGTAGGCCCACTCGCA
GGCATTGGATCCCTGCTCGTTCTTGTCCACGCAGGCGGCCAAGGAGGCGT
GGAAGGCCTCGTTGTGGTCAGCGTGGTTGCCCACCAGCTGTTGGTGGATG
TTCTCCACGTTGAAACCGCTCTGGACGTCGAACAGGCCCCACTTGGTGAA
GACGCACTTGATGTAGCACTGGGTCTTGGCGTCGTTGGGGTACTCCCACT
TCTGGTACTTCTCCACCAGATCCACGGGCACGGCCAGCTCCTTGACGCAC
TCATCGCGGTAGGCCAGCATGTCGTGTCGGTTCTTCACCACATAGTCGGC
GGAGGCCAGTCCAATCAGCACGCAGATGGCAACGAAAACCTTCATGTCGA
CTGATAACTTCGTA
BS14034.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18111-PA | 429 | Obp99a-RA | 1..429 | 445..17 | 2145 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:13:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-RB | 561 | CG18111-RB | 60..488 | 445..17 | 2145 | 100 | Minus |
Obp99a-RA | 610 | CG18111-RA | 60..488 | 445..17 | 2145 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:13:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29671822..29672212 | 407..17 | 1955 | 100 | Minus |
3R | 32079331 | 3R | 29671716..29671755 | 445..406 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:13:54 has no hits.
BS14034.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:01 Download gff for
BS14034.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18111-PA | 1..429 | 17..445 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:26:56 Download gff for
BS14034.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 53..496 | 6..452 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:47:15 Download gff for
BS14034.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 53..496 | 6..452 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:47:15 Download gff for
BS14034.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29671709..29671754 | 407..452 | 93 | -> | Minus |
3R | 29671823..29672220 | 6..406 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:26:56 Download gff for
BS14034.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25497431..25497476 | 407..452 | 93 | -> | Minus |
arm_3R | 25497545..25497942 | 6..406 | 98 | | Minus |
BS14034.5prime Sequence
459 bp (459 high quality bases) assembled on 2006-10-13
> BS14034.5prime
GAAGTTATCAGTCGACATGAAGGTTTTCGTTGCCATCTGCGTGCTGATTG
GACTGGCCTCCGCCGACTATGTGGTGAAGAACCGACACGACATGCTGGCC
TACCGCGATGAGTGCGTCAAGGAGCTGGCCGTGCCCGTGGATCTGGTGGA
GAAGTACCAGAAGTGGGAGTACCCCAACGACGCCAAGACCCAGTGCTACA
TCAAGTGCGTCTTCACCAAGTGGGGCCTGTTCGACGTCCAGAGCGGTTTC
AACGTGGAGAACATCCACCAACAGCTGGTGGGCAACCACGCTGACCACAA
CGAGGCCTTCCACGCCTCCTTGGCCGCCTGCGTGGACAAGAACGAGCAGG
GATCCAATGCCTGCGAGTGGGCCTACCGCGGAGCCACCTGTCTGCTGAAG
GAGAACCTGGCCCAGATCCAGAAGAGCCTGGCCCCGAAGGCCTAGAAGCT
TTCTAGACC
BS14034.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18111-PA | 429 | Obp99a-RA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:33:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-RB | 561 | CG18111-RB | 60..488 | 17..445 | 2145 | 100 | Plus |
Obp99a-RA | 610 | CG18111-RA | 60..488 | 17..445 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:33:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29671822..29672212 | 55..445 | 1955 | 100 | Plus |
3R | 32079331 | 3R | 29671716..29671755 | 17..56 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 10:33:12 has no hits.
BS14034.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:02 Download gff for
BS14034.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18111-PA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:42:51 Download gff for
BS14034.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 53..496 | 10..456 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:27:16 Download gff for
BS14034.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 53..496 | 10..456 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:27:16 Download gff for
BS14034.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29671709..29671754 | 10..55 | 93 | -> | Plus |
3R | 29671823..29672220 | 56..456 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:42:51 Download gff for
BS14034.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25497431..25497476 | 10..55 | 93 | -> | Plus |
arm_3R | 25497545..25497942 | 56..456 | 98 | | Plus |
BS14034.complete Sequence
461 bp assembled on 2006-11-01
GenBank Submission: FJ637587
> BS14034.complete
GAAGTTATCAGTCGACATGAAGGTTTTCGTTGCCATCTGCGTGCTGATTG
GACTGGCCTCCGCCGACTATGTGGTGAAGAACCGACACGACATGCTGGCC
TACCGCGATGAGTGCGTCAAGGAGCTGGCCGTGCCCGTGGATCTGGTGGA
GAAGTACCAGAAGTGGGAGTACCCCAACGACGCCAAGACCCAGTGCTACA
TCAAGTGCGTCTTCACCAAGTGGGGCCTGTTCGACGTCCAGAGCGGTTTC
AACGTGGAGAACATCCACCAACAGCTGGTGGGCAACCACGCTGACCACAA
CGAGGCCTTCCACGCCTCCTTGGCCGCCTGCGTGGACAAGAACGAGCAGG
GATCCAATGCCTGCGAGTGGGCCTACCGCGGAGCCACCTGTCTGCTGAAG
GAGAACCTGGCCCAGATCCAGAAGAGCCTGGCCCCGAAGGCCTAGAAGCT
TTCTAGACCAT
BS14034.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:36:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-RB | 429 | CG18111-PB | 1..429 | 17..445 | 2145 | 100 | Plus |
Obp99a-RA | 429 | CG18111-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-RB | 561 | CG18111-RB | 60..488 | 17..445 | 2145 | 100 | Plus |
Obp99a-RA | 610 | CG18111-RA | 60..488 | 17..445 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29671822..29672212 | 55..445 | 1955 | 100 | Plus |
3R | 32079331 | 3R | 29671716..29671755 | 17..56 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:36:17 has no hits.
BS14034.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:58 Download gff for
BS14034.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:51:37 Download gff for
BS14034.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 50..493 | 10..456 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:43 Download gff for
BS14034.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 60..488 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:58 Download gff for
BS14034.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 50..493 | 10..456 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:13 Download gff for
BS14034.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp99a-RA | 60..488 | 17..445 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:13 Download gff for
BS14034.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29671823..29672212 | 56..445 | 100 | | Plus |
3R | 29671716..29671754 | 17..55 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:43 Download gff for
BS14034.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25497438..25497476 | 17..55 | 100 | -> | Plus |
arm_3R | 25497545..25497934 | 56..445 | 100 | | Plus |
BS14034.pep Sequence
Translation from 16 to 444
> BS14034.pep
MKVFVAICVLIGLASADYVVKNRHDMLAYRDECVKELAVPVDLVEKYQKW
EYPNDAKTQCYIKCVFTKWGLFDVQSGFNVENIHQQLVGNHADHNEAFHA
SLAACVDKNEQGSNACEWAYRGATCLLKENLAQIQKSLAPKA*
BS14034.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:18:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp99a-PB | 142 | CG18111-PB | 1..142 | 1..142 | 764 | 100 | Plus |
Obp99a-PA | 142 | CG18111-PA | 1..142 | 1..142 | 764 | 100 | Plus |
Obp99b-PB | 149 | CG7592-PB | 3..147 | 5..138 | 290 | 37.9 | Plus |
Obp99b-PA | 149 | CG7592-PA | 3..147 | 5..138 | 290 | 37.9 | Plus |
Obp44a-PB | 143 | CG2297-PB | 5..140 | 3..138 | 278 | 42.3 | Plus |