Clone BS14045 Report

Search the DGRC for BS14045

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:140
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG9686-RA
Protein status:BS14045.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14045.3prime Sequence

519 bp (519 high quality bases) assembled on 2006-10-13

> BS14045.3prime
ATGGTCTAGAAAGCTTCTATTTCCTCAATTTGCTGCAGTTGCCCAATGCA
TCCAGAATGTGTCCATGCCCACACTGCTGCTCGCCCTTGAGGATGTCCGG
ATTGATAATCTCCACGTTGGCCAGAAAGCCGCGATCCTTGCTCATCTCCT
CGGCGGAATCCTTGGCCAGCTTGTCGCGGAAGTCATCGAAGCGATCCTTG
AGATCGCTACCCAGGACCTTGGCCTTCTCGCCCAGCTTCTGGGCGCCCTC
TTTGAGTTCCGTGCCCAAGTCCTTGGCCTTCTCGCCCAGCTTCTTGGCTC
CCTCCTTGATGTGGCATCCCACGTTCTTGAAGAAGTCGCGCACCTCGTGC
TCCGAACTGCTACTGCTGCCCGTAATCTCCGATATCTTATCGCTCACATC
TCCAAGTCCGGGTATCTTGTCCTCGCAATCGAAGAGACCCGCCTGACTTT
GAAGAAAAACTCCGGCGAGCAGCAGGAGGACCAGCGATCCTTGCAAGCTA
TTCATGTCGACTGATAACT

BS14045.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG9686-PA 489 CG9686-RA 1..489 505..17 2420 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG9686-RA 666 CG9686-RA 81..569 505..17 2430 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:48:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9879950..9880438 505..17 2430 99.8 Minus
Blast to na_te.dros performed on 2015-02-03 06:48:25 has no hits.

BS14045.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:09 Download gff for BS14045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9686-PA 1..489 17..505 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:31:51 Download gff for BS14045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 72..569 17..516 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:39:37 Download gff for BS14045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 72..569 17..516 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:39:37 Download gff for BS14045.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9879941..9880438 17..516 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:31:51 Download gff for BS14045.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9773974..9774471 17..516 99   Minus

BS14045.5prime Sequence

519 bp (519 high quality bases) assembled on 2006-10-13

> BS14045.5prime
GAAGTTATCAGTCGACATGAATAGCTTGCAAGGATCGCTGGTCCTCCTGC
TGCTCGCCGGAGTTTTTCTTCAAAGTCAGGCGGGTCTCTTCGATTGCGAG
GACAAGATACCCGGACTTGGAGATGTGAGCGATAAGATATCGGAGATTAC
GGGCAGCAGTAGCAGTTCGGAGCACGAGGTGCGCGACTTCTTCAAGAACG
TGGGATGCCACATCAAGGAGGGAGCCAAGAAGCTGGGCGAGAAGGCCAAG
GACTTGGGCACGGAACTCAAAGAGGGCGCCCAGAAGCTGGGCGAGAAGGC
CAAGGTCCTGGGTAGCGATCTCAAGGATCGCTTCGATGACTTCCGCGACA
AGCTGGCCAAGGATTCCGCCGAGGAGATGAGCAAGGATCGCGGCTTTCTG
GCCAACGTGGAGATTATCAATCCGGACATCCTCAAGGGCGAGCAGCAGTG
TGGGCATGGACACATTCTGGATGCATTGGGCAACTGCAGCAAATTGAGGA
AATAGAAGCTTTCTAGACC

BS14045.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG9686-PA 489 CG9686-RA 1..489 17..505 2420 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG9686-RA 666 CG9686-RA 81..569 17..505 2430 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:19:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9879950..9880438 17..505 2430 99.8 Plus
Blast to na_te.dros performed on 2015-02-12 11:19:03 has no hits.

BS14045.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:10 Download gff for BS14045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9686-PA 1..489 17..505 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:47:25 Download gff for BS14045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 72..569 6..505 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:36:06 Download gff for BS14045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 72..569 6..505 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:36:06 Download gff for BS14045.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9879941..9880438 6..505 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:47:25 Download gff for BS14045.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9773974..9774471 6..505 99   Plus

BS14045.complete Sequence

521 bp assembled on 2006-11-01

GenBank Submission: FJ637592

> BS14045.complete
GAAGTTATCAGTCGACATGAATAGCTTGCAAGGATCGCTGGTCCTCCTGC
TGCTCGCCGGAGTTTTTCTTCAAAGTCAGGCGGGTCTCTTCGATTGCGAG
GACAAGATACCCGGACTTGGAGATGTGAGCGATAAGATATCGGAGATTAC
GGGCAGCAGTAGCAGTTCGGAGCACGAGGTGCGCGACTTCTTCAAGAACG
TGGGATGCCACATCAAGGAGGGAGCCAAGAAGCTGGGCGAGAAGGCCAAG
GACTTGGGCACGGAACTCAAAGAGGGCGCCCAGAAGCTGGGCGAGAAGGC
CAAGGTCCTGGGTAGCGATCTCAAGGATCGCTTCGATGACTTCCGCGACA
AGCTGGCCAAGGATTCCGCCGAGGAGATGAGCAAGGATCGCGGCTTTCTG
GCCAACGTGGAGATTATCAATCCGGACATCCTCAAGGGCGAGCAGCAGTG
TGGGCATGGACACATTCTGGATGCATTGGGCAACTGCAGCAAATTGAGGA
AATAGAAGCTTTCTAGACCAT

BS14045.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG9686-RA 489 CG9686-PA 1..489 17..505 2430 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG9686-RA 666 CG9686-RA 81..569 17..505 2430 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9879950..9880438 17..505 2430 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 01:23:21 has no hits.

BS14045.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:33:30 Download gff for BS14045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 1..489 17..505 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:58:14 Download gff for BS14045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 73..570 6..505 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:48:21 Download gff for BS14045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 81..563 17..499 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:33:31 Download gff for BS14045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 73..570 6..505 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:49 Download gff for BS14045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9686-RA 81..563 17..499 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:49 Download gff for BS14045.complete
Subject Subject Range Query Range Percent Splice Strand
X 9879950..9880432 17..499 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:48:21 Download gff for BS14045.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9773983..9774465 17..499 99   Plus

BS14045.pep Sequence

Translation from 16 to 504

> BS14045.pep
MNSLQGSLVLLLLAGVFLQSQAGLFDCEDKIPGLGDVSDKISEITGSSSS
SEHEVRDFFKNVGCHIKEGAKKLGEKAKDLGTELKEGAQKLGEKAKVLGS
DLKDRFDDFRDKLAKDSAEEMSKDRGFLANVEIINPDILKGEQQCGHGHI
LDALGNCSKLRK*

BS14045.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:39:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9686-PA 162 CG9686-PA 1..162 1..162 827 100 Plus