Clone Sequence Records
BS14045.3prime Sequence
519 bp (519 high quality bases) assembled on 2006-10-13
> BS14045.3prime
ATGGTCTAGAAAGCTTCTATTTCCTCAATTTGCTGCAGTTGCCCAATGCA
TCCAGAATGTGTCCATGCCCACACTGCTGCTCGCCCTTGAGGATGTCCGG
ATTGATAATCTCCACGTTGGCCAGAAAGCCGCGATCCTTGCTCATCTCCT
CGGCGGAATCCTTGGCCAGCTTGTCGCGGAAGTCATCGAAGCGATCCTTG
AGATCGCTACCCAGGACCTTGGCCTTCTCGCCCAGCTTCTGGGCGCCCTC
TTTGAGTTCCGTGCCCAAGTCCTTGGCCTTCTCGCCCAGCTTCTTGGCTC
CCTCCTTGATGTGGCATCCCACGTTCTTGAAGAAGTCGCGCACCTCGTGC
TCCGAACTGCTACTGCTGCCCGTAATCTCCGATATCTTATCGCTCACATC
TCCAAGTCCGGGTATCTTGTCCTCGCAATCGAAGAGACCCGCCTGACTTT
GAAGAAAAACTCCGGCGAGCAGCAGGAGGACCAGCGATCCTTGCAAGCTA
TTCATGTCGACTGATAACT
BS14045.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9686-PA | 489 | CG9686-RA | 1..489 | 505..17 | 2420 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:48:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9686-RA | 666 | CG9686-RA | 81..569 | 505..17 | 2430 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:48:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9879950..9880438 | 505..17 | 2430 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:48:25 has no hits.
BS14045.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:09 Download gff for
BS14045.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-PA | 1..489 | 17..505 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:31:51 Download gff for
BS14045.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 72..569 | 17..516 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:39:37 Download gff for
BS14045.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 72..569 | 17..516 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:39:37 Download gff for
BS14045.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9879941..9880438 | 17..516 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:31:51 Download gff for
BS14045.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9773974..9774471 | 17..516 | 99 | | Minus |
BS14045.5prime Sequence
519 bp (519 high quality bases) assembled on 2006-10-13
> BS14045.5prime
GAAGTTATCAGTCGACATGAATAGCTTGCAAGGATCGCTGGTCCTCCTGC
TGCTCGCCGGAGTTTTTCTTCAAAGTCAGGCGGGTCTCTTCGATTGCGAG
GACAAGATACCCGGACTTGGAGATGTGAGCGATAAGATATCGGAGATTAC
GGGCAGCAGTAGCAGTTCGGAGCACGAGGTGCGCGACTTCTTCAAGAACG
TGGGATGCCACATCAAGGAGGGAGCCAAGAAGCTGGGCGAGAAGGCCAAG
GACTTGGGCACGGAACTCAAAGAGGGCGCCCAGAAGCTGGGCGAGAAGGC
CAAGGTCCTGGGTAGCGATCTCAAGGATCGCTTCGATGACTTCCGCGACA
AGCTGGCCAAGGATTCCGCCGAGGAGATGAGCAAGGATCGCGGCTTTCTG
GCCAACGTGGAGATTATCAATCCGGACATCCTCAAGGGCGAGCAGCAGTG
TGGGCATGGACACATTCTGGATGCATTGGGCAACTGCAGCAAATTGAGGA
AATAGAAGCTTTCTAGACC
BS14045.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9686-PA | 489 | CG9686-RA | 1..489 | 17..505 | 2420 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:19:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9686-RA | 666 | CG9686-RA | 81..569 | 17..505 | 2430 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:19:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9879950..9880438 | 17..505 | 2430 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:19:03 has no hits.
BS14045.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:10 Download gff for
BS14045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-PA | 1..489 | 17..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:47:25 Download gff for
BS14045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 72..569 | 6..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:36:06 Download gff for
BS14045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 72..569 | 6..505 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:36:06 Download gff for
BS14045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9879941..9880438 | 6..505 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:47:25 Download gff for
BS14045.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9773974..9774471 | 6..505 | 99 | | Plus |
BS14045.complete Sequence
521 bp assembled on 2006-11-01
GenBank Submission: FJ637592
> BS14045.complete
GAAGTTATCAGTCGACATGAATAGCTTGCAAGGATCGCTGGTCCTCCTGC
TGCTCGCCGGAGTTTTTCTTCAAAGTCAGGCGGGTCTCTTCGATTGCGAG
GACAAGATACCCGGACTTGGAGATGTGAGCGATAAGATATCGGAGATTAC
GGGCAGCAGTAGCAGTTCGGAGCACGAGGTGCGCGACTTCTTCAAGAACG
TGGGATGCCACATCAAGGAGGGAGCCAAGAAGCTGGGCGAGAAGGCCAAG
GACTTGGGCACGGAACTCAAAGAGGGCGCCCAGAAGCTGGGCGAGAAGGC
CAAGGTCCTGGGTAGCGATCTCAAGGATCGCTTCGATGACTTCCGCGACA
AGCTGGCCAAGGATTCCGCCGAGGAGATGAGCAAGGATCGCGGCTTTCTG
GCCAACGTGGAGATTATCAATCCGGACATCCTCAAGGGCGAGCAGCAGTG
TGGGCATGGACACATTCTGGATGCATTGGGCAACTGCAGCAAATTGAGGA
AATAGAAGCTTTCTAGACCAT
BS14045.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:23:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9686-RA | 489 | CG9686-PA | 1..489 | 17..505 | 2430 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:23:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9686-RA | 666 | CG9686-RA | 81..569 | 17..505 | 2430 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:23:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9879950..9880438 | 17..505 | 2430 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:23:21 has no hits.
BS14045.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:33:30 Download gff for
BS14045.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 1..489 | 17..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:58:14 Download gff for
BS14045.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 73..570 | 6..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:48:21 Download gff for
BS14045.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 81..563 | 17..499 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:33:31 Download gff for
BS14045.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 73..570 | 6..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:49 Download gff for
BS14045.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9686-RA | 81..563 | 17..499 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:49 Download gff for
BS14045.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9879950..9880432 | 17..499 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:48:21 Download gff for
BS14045.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9773983..9774465 | 17..499 | 99 | | Plus |
BS14045.pep Sequence
Translation from 16 to 504
> BS14045.pep
MNSLQGSLVLLLLAGVFLQSQAGLFDCEDKIPGLGDVSDKISEITGSSSS
SEHEVRDFFKNVGCHIKEGAKKLGEKAKDLGTELKEGAQKLGEKAKVLGS
DLKDRFDDFRDKLAKDSAEEMSKDRGFLANVEIINPDILKGEQQCGHGHI
LDALGNCSKLRK*
BS14045.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:39:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9686-PA | 162 | CG9686-PA | 1..162 | 1..162 | 827 | 100 | Plus |