Clone Sequence Records
BS14051.complete Sequence
881 bp assembled on 2010-02-09
GenBank Submission: KX803508
> BS14051.complete
GAAGTTATCAGTCGACATGAGGTCGTTTTTGCTGATGATGATGCTGTTGC
TTGGAACAAGTTGGGCACAACTTGTTTACCGGGACTATAGCTCACAAATC
GGTGGAGGATTTTATAGACCCCAAAGAGGACAATATGGACTGATAAGTGA
TGGAAGGCGGCCAGGAGGTCCATACGAAAGTACTGCTCAAGAGGGTTTAA
TCTCTGGAGTGGATACGGGAGGTCCCTTTGGTAATTATGGAAACTACGGA
TCAGTAAATGGAGGACTACTTGCTACCAATCAGCAAGGAGGACTTATTTC
TGGCGGAAGTAGTGGAGGACCCTTTGCCCAAACTGGCAGCTCCTTTACCA
AAGAAGGACTAATTTCTGATGCCAACAGTGGTGGTCCTTTTAACAGCAAC
CAAGGATTATTTGGTTTGAATAGTGGAAGCGGTCTGCTCAGTGGAGCTAA
TACTGGAGGACCATTTGCCAGTGATCATCAAGGAGGTTTAATTTCCGGAG
GAAATTCTGGAGGCCCTTTTGGAAGTGACCCATGGGCAAATAGTAATGAA
GGGACGTATGAAGGACTTATTTTTGGTGCCAATAGTGGAGGCCCTTTTGG
GAGGAATCAAGGAAGATTTCATGGCGGAGGGCTAACTAGTGGCAGTAATA
CTGGAGGTCCATTTGCAAACAGAAATCAACTTGGAGGACTGATTGCTGGC
GGAAACAGTGGAGGTCCCTTCGAAAGCAAAGAAGCGACAATCGATCACAG
TGAAGGTGGTCTAATCGAAGGAGGTAAGATAGGTGGTCCTCTGGGCCAAA
ATCCAGGAGGATTAGTTACTGGAGGCAATAGTGGAGGCCCCTTTGGACAA
GCTGAAAGTAGCTAAAAGCTTTCTAGACCTT
BS14051.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:08:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-RA | 849 | CG30151-PA | 1..849 | 17..865 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:08:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-RA | 962 | CG30151-RA | 25..875 | 17..867 | 4255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:08:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20528590..20529440 | 867..17 | 4255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 11:08:04 has no hits.
BS14051.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:37 Download gff for
BS14051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..871 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:23:43 Download gff for
BS14051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..871 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:08:34 Download gff for
BS14051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..871 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:29 Download gff for
BS14051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..871 | 17..863 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:39:29 Download gff for
BS14051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20528594..20529440 | 17..863 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:23:43 Download gff for
BS14051.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16416099..16416945 | 17..863 | 100 | | Minus |
BS14051.5prime Sequence
666 bp (656 high quality bases) assembled on 2006-10-13
> BS14051.5prime
GAAGTTATCAGTCGACATGAGGTCGTTTTTGCTGATGATGATGCTGTTGC
TTGGAACAAGTTGGGCACAACTTGTTTACCGGGACTATAGCTCACAAATC
GGTGGAGGATTTTATAGACCCCAAAGAGGACAATATGGACTGATAAGTGA
TGGAAGGCGGCCAGGAGGTCCATACGAAAGTACTGCTCAAGAGGGTTTAA
TCTCTGGAGTGGATACGGGAGGTCCCTTTGGTAATTATGGAAACTACGGA
TCAGTAAATGGAGGACTACTTGCTACCAATCAGCAAGGAGGACTTATTTC
TGGCGGAAGTAGTGGAGGACCCTTTGCCCAAACTGGCAGCTCCTTTACCA
AAGAAGGACTAATTTCTGATGCCAACAGTGGTGGTCCTTTTAACAGCAAC
CAAGGATTATTTGGTTTGAATAGTGGAAGCGGTCTGCTCAGTGGAGCTAA
TACTGGAGGACCATTTGCCAGTGATCATCAAGGAGGTTTAATTTCCGGAG
GAAATTCTGGAGGCCCTTTTGGAAGTGACCCATGGGCAAATAGTAATGAA
GGGACGTATGAAGGACTTATTTTTGGTGCCAATAGTGAAGGCCCTTTTTG
GGAGGAATCAAGGAAGATTTCATGGCGGAGGGCTAACTAGTGGCAGTAAA
TACTGGAGGTCCATTT
BS14051.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:21:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-PA | 849 | CG30151-RA | 1..648 | 17..666 | 3145 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:02:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-RA | 962 | CG30151-RA | 25..672 | 17..666 | 3185 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:02:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20528793..20529440 | 666..17 | 3135 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-11 19:02:48 has no hits.
BS14051.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:12 Download gff for
BS14051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-PA | 1..648 | 17..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 05:09:10 Download gff for
BS14051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..672 | 17..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:56:38 Download gff for
BS14051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 25..672 | 17..666 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 23:56:38 Download gff for
BS14051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20528793..20529441 | 16..666 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 05:09:10 Download gff for
BS14051.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16416298..16416946 | 16..666 | 99 | -> | Minus |
BS14051.pep Sequence
Translation from 16 to 864
> BS14051.pep
MRSFLLMMMLLLGTSWAQLVYRDYSSQIGGGFYRPQRGQYGLISDGRRPG
GPYESTAQEGLISGVDTGGPFGNYGNYGSVNGGLLATNQQGGLISGGSSG
GPFAQTGSSFTKEGLISDANSGGPFNSNQGLFGLNSGSGLLSGANTGGPF
ASDHQGGLISGGNSGGPFGSDPWANSNEGTYEGLIFGANSGGPFGRNQGR
FHGGGLTSGSNTGGPFANRNQLGGLIAGGNSGGPFESKEATIDHSEGGLI
EGGKIGGPLGQNPGGLVTGGNSGGPFGQAESS*
BS14051.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:14:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-PA | 282 | CG30151-PA | 1..282 | 1..282 | 1509 | 100 | Plus |
glo-PA | 586 | CG6946-PA | 239..468 | 46..277 | 208 | 34.2 | Plus |
glo-PB | 586 | CG6946-PB | 239..468 | 46..277 | 208 | 34.2 | Plus |
CG17108-PA | 342 | CG17108-PA | 28..231 | 46..277 | 199 | 35.1 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 308..533 | 24..277 | 197 | 33.5 | Plus |
CG17108-PA | 342 | CG17108-PA | 48..319 | 23..277 | 185 | 32.3 | Plus |
glo-PA | 586 | CG6946-PA | 292..472 | 30..224 | 157 | 29.9 | Plus |
glo-PB | 586 | CG6946-PB | 292..472 | 30..224 | 157 | 29.9 | Plus |
CG17108-PA | 342 | CG17108-PA | 24..186 | 96..275 | 155 | 35.7 | Plus |