Clone Sequence Records
BS14053.3prime Sequence
363 bp (363 high quality bases) assembled on 2006-10-13
> BS14053.3prime
ATGGTCTAGAAAGCTTTCAGTCAGTCCGGGCAGCTTTGGGAATGGTTTTC
ACTTGGGCCTGGGTTGGATTCTGTCTGAGGGCTTGGGATTGGGATTCGGC
TTGGGTTTGGCACTGGCACTGAACCTGCTGCGACCATAAATTCCATTGAT
TGTCGCGCCAGCGTTTTGTATGACAAGTTCGAAGTCTTGTATTGTCTGTC
GCCTCGTTTTGTCTTGCGTTTGTATGACTTCTGGTACCAGCCAGCCACAC
CCTGTCCCCTGGAGTCCCCGGAAACCCCCTGATGGCCTCTGAGAAGCCCC
CCTTTAACCCCCTGAAACTCCACCTCTGCTGCCACTCACCTGCCAGCATG
TCGACTGATAACT
BS14053.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32399-PA | 333 | CG32399-RA | 1..333 | 349..17 | 1665 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-01-30 18:01:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:01:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6344560..6344892 | 17..349 | 1665 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 18:01:35 has no hits.
BS14053.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:13 Download gff for
BS14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32399-PA | 1..333 | 17..349 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:07:39 Download gff for
BS14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344560..6344899 | 17..357 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:07:39 Download gff for
BS14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344560..6344899 | 17..357 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:53:08 Download gff for
BS14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337660..6337999 | 17..357 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:53:08 Download gff for
BS14053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337660..6337999 | 17..357 | 99 | | Plus |
BS14053.complete Sequence
365 bp assembled on 2006-11-01
> BS14053.complete
GAAGTTATCAGTCGACATGCTGGCAGGTGAGTGGCAGCAGAGGTGGAGTT
TCAGGGGGTTAAAGGGGGGCTTCTCAGAGGCCATCAGGGGGTTTCCGGGG
ACTCCAGGGGACAGGGTGTGGCTGGCTGGTACCAGAAGTCATACAAACGC
AAGACAAAACGAGGCGACAGACAATACAAGACTTCGAACTTGTCATACAA
AACGCTGGCGCGACAATCAATGGAATTTATGGTCGCAGCAGGTTCAGTGC
CAGTGCCAAACCCAAGCCGAATCCCAATCCCAAGCCCTCAGACAGAATCC
AACCCAGGCCCAAGTGAAAACCATTCCCAAAGCTGCCCGGACTGACTGAA
AGCTTTCTAGACCAT
BS14053.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 14:41:26 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 14:41:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:41:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6344560..6344892 | 349..17 | 1665 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:41:25 has no hits.
BS14053.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:38:22 Download gff for
BS14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 1590..1615 | 260..285 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:38:22 Download gff for
BS14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34382-RC | 2145..2170 | 260..285 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:48 Download gff for
BS14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344561..6344892 | 17..348 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:48 Download gff for
BS14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344561..6344892 | 17..348 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:30 Download gff for
BS14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337661..6337992 | 17..348 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:30 Download gff for
BS14053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337661..6337992 | 17..348 | 100 | | Minus |
BS14053.5prime Sequence
363 bp (363 high quality bases) assembled on 2006-10-13
> BS14053.5prime
GAAGTTATCAGTCGACATGCTGGCAGGTGAGTGGCAGCAGAGGTGGAGTT
TCAGGGGGTTAAAGGGGGGCTTCTCAGAGGCCATCAGGGGGTTTCCGGGG
ACTCCAGGGGACAGGGTGTGGCTGGCTGGTACCAGAAGTCATACAAACGC
AAGACAAAACGAGGCGACAGACAATACAAGACTTCGAACTTGTCATACAA
AACGCTGGCGCGACAATCAATGGAATTTATGGTCGCAGCAGGTTCAGTGC
CAGTGCCAAACCCAAGCCGAATCCCAATCCCAAGCCCTCAGACAGAATCC
AACCCAGGCCCAAGTGAAAACCATTCCCAAAGCTGCCCGGACTGACTGAA
AGCTTTCTAGACC
BS14053.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:44:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32399-PA | 333 | CG32399-RA | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-01-30 18:02:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:02:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6344560..6344892 | 349..17 | 1665 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 18:02:11 has no hits.
BS14053.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:13 Download gff for
BS14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32399-PA | 1..333 | 17..349 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:07:44 Download gff for
BS14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344560..6344899 | 9..349 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:07:44 Download gff for
BS14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6344560..6344899 | 9..349 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:53:14 Download gff for
BS14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337660..6337999 | 9..349 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:53:14 Download gff for
BS14053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6337660..6337999 | 9..349 | 99 | | Minus |
BS14053.pep Sequence
Translation from 16 to 348
> BS14053.pep
MLAGEWQQRWSFRGLKGGFSEAIRGFPGTPGDRVWLAGTRSHTNARQNEA
TDNTRLRTCHTKRWRDNQWNLWSQQVQCQCQTQAESQSQALRQNPTQAQV
KTIPKAARTD*
Sequence BS14053.pep has no blast hits.