Clone BS14061 Report

Search the DGRC for BS14061

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:140
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptCG6125-RA
Protein status:BS14061.pep: full length peptide match
Sequenced Size:1955

Clone Sequence Records

BS14061.complete Sequence

1955 bp assembled on 2009-12-07

GenBank Submission: KX801894

> BS14061.complete
GAAGTTATCAGTCGACATGCGTTGGCCGCGAAAGCACACGTTCGGCTTGT
GGCCCAAACGAAATGGTCGGAATCGCAGTAGTGGAGAAGCCACTGGGGGG
CAACCCCAGGCCACTGTGGCCACCATTTACGATCCTGGCTGCGAGGAGAA
GGAGAAGTACACGGCCCAGAATGGCGATGATTACTATGGCCAGGCGCACA
CCGTCGACCTGGACGTGGCCAGCAAGTACTCCAAGCCCAAGGAGGCCCAC
TGGCTGGTGCGGCGCATATTCTTCCTCAGCTGGATTACCAGTTACGATCG
AGAGCAGGCGTTCGCCGATTTGATTGCCGGCATCACCTTGGGCCTGACCA
TCATACCACAAAGTATTGCTTATGCCGCGCTGGCAGGACTCTCCTCGGAG
TACGGCCTGTACTCCGCCTTCATTGGCTCCATCATCTATGTTTTCTTTGG
GACGATACCACAGGTGTCCATTGGACCCACCAGTCTGATGGCCATTCTCA
CCCTGCAATTCTGCGCCGACAAACCGGTGCAGGTGGTCATCGTGCTGGCC
TTCCTCGCCGGTTTGGTGGAACTGGCCATGGGTGTGTTCCAGCTGGGATT
CATCGTGAGCTTCATACCAGCTCCGGTTACCAAGGCTTTTACATCCGGCA
CTGCGCTGATCGTGGTCTTTGCCCAGATCAAGAATCTCTTAGGTGTTCGC
ATAAAGGGATTCCCCTCGATCGGTGACTTTTTCACCAATATCCGGCCCAC
GGATGCCGCCATGGGAATCTCGTGCATGGTTGTGCTACTTTCGCTGCGGC
TACTGTCGCAAGTGAATTTCAAGCAGGACACGCCTGTTACGCGTCGCCTT
AAGAAGATCCTGTGGTACATCAGTATTTCCCGCAATGCTCTGGTTGTCTT
CTTCACTGGCCTTTTGGTTTTCATCTGGGTGAAGAAGAGCTCCATTGAGG
CGGTCCCCTTTGCGCTTTCCTCAAAGGTTTCCTCGGCCATGCCCACAATC
AAGCTGCCGCCCTTCGCCTTCGAGTATCAGAATCGCACCTATGTGTTCAC
GGATATCCTCCATGAGCTGGGCAGCGGAATTGTTGTGGTGCCAATTGTGG
CGGTTTTGGCCAATGTGGCCATTGCCAAAGCCTTCGTCAAGGATGGCAAT
CTGGATGCCTCGCAGGAGATGCTTACTTTGGGTTTGTGCAACATAGCCGG
CTCCTTCTTCAGTGCCATGCCCACCTGCGGAGCCTTCACCCGCTCGGCGG
TGAGTCAGGCATCTGGAGTACGAACGCCAATGGCTGGCATCTACACGGGA
TTGATAGTGCTCTCCGCATTGAGCATCCTGACCCCCTACTTCCAGTACAT
TCCAAAGGCTTCCCTATCGGCAGTTTTAATAGCAGCAGTCATCTTTATGA
TTGATCTTGCTCCAGTTAAGGAGCTATGGCAGACCAACAAAAAGGACTTC
TTTAGCTGGGTGGGAAGTTTTATCATCTGTTTGGTGGCTGGCGTCGAGTT
GGGTCTTCTCTTTGGCATTGTTCTCAGCATGGTGTTTATATTGCTGCGCT
TGGGTAACCCCAAATTTGAGGTCACCCTTAAACAGCATGAATCCACGTAC
TATGTGCACATCGTTCCCCAATCGGATGTCTATTACACAGGCGTCGATGC
ACTACGATCTGAGTTGCGAGGAGCATGCAGATTGTATCACAATGATTTCC
CAGTGGTTCTCGATTGCGCACGCTTTATGCAGTTCGATGCCACCTTCAGT
GAGATGCTGATATCGGTGGCCAAGGAGATGGCCAGCCACGATGTCCTGCT
AATCCTGCAGAACATGAGCCTCAAAGTGCAGCAGATGCTGCCCGTGATGG
GTAATGTGCGGTTCTGCCAGGAGGATAGCCAGCTTTCGAGTCATCTGCAG
GTGGAAAAGGAGGCACCTGTTGTGGAGGCCAAGCTATAGAAGCTTTCTAG
ACCAT

BS14061.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG6125-RA 1923 CG6125-PA 1..1923 17..1939 9615 100 Plus
CG6125-RC 1836 CG6125-PC 27..1836 130..1939 9035 99.9 Plus
CG6125-RB 1836 CG6125-PB 27..1836 130..1939 9035 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG6125-RA 2153 CG6125-RA 9..1931 17..1939 9615 100 Plus
CG6125-RC 2406 CG6125-RC 166..1975 130..1939 9035 99.9 Plus
CG6125-RB 2197 CG6125-RB 166..1975 130..1939 9035 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15404642..15405306 799..135 3325 100 Minus
3R 32079331 3R 15403029..15403384 1939..1584 1780 100 Minus
3R 32079331 3R 15404020..15404357 1136..799 1690 100 Minus
3R 32079331 3R 15403686..15403949 1399..1136 1320 100 Minus
3R 32079331 3R 15403439..15403625 1585..1399 935 100 Minus
3R 32079331 3R 15405380..15405497 134..17 590 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:20:07 has no hits.

BS14061.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:48:26 Download gff for BS14061.complete
Subject Subject Range Query Range Percent Splice Strand
CG6125-RA 9..1931 17..1939 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:43 Download gff for BS14061.complete
Subject Subject Range Query Range Percent Splice Strand
CG6125-RA 9..1931 17..1939 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:01:49 Download gff for BS14061.complete
Subject Subject Range Query Range Percent Splice Strand
CG6125-RA 9..1931 17..1939 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:10 Download gff for BS14061.complete
Subject Subject Range Query Range Percent Splice Strand
CG6125-RA 9..1931 17..1939 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:10 Download gff for BS14061.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15403029..15403382 1586..1939 100 <- Minus
3R 15403439..15403624 1400..1585 100 <- Minus
3R 15403686..15403948 1137..1399 100 <- Minus
3R 15404020..15404356 800..1136 100 <- Minus
3R 15404642..15405306 135..799 100 <- Minus
3R 15405380..15405497 17..134 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:43 Download gff for BS14061.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11228751..11229104 1586..1939 100 <- Minus
arm_3R 11229161..11229346 1400..1585 100 <- Minus
arm_3R 11229408..11229670 1137..1399 100 <- Minus
arm_3R 11229742..11230078 800..1136 100 <- Minus
arm_3R 11230364..11231028 135..799 100 <- Minus
arm_3R 11231102..11231219 17..134 100   Minus

BS14061.3prime Sequence

534 bp (516 high quality bases) assembled on 2006-10-13

> BS14061.3prime
ATGGTCTAGAAAGCTTCTATAGCTTGGCCTCCACAACAGGTGCCTCCTTT
TCCACCTGCAGATGACTCGAAAGCTGGCTATCCTCCTGGCAGAACCGCAC
ATTACCCATCACGGGCAGCATCTGCTGCACTTTGAGGCTCATGTTCTGCA
GGATTAGCAGGACATCGTGGCTGGCCATCTCCTTGGCCACCGATATCAGC
ATCTCACTGAAGGTGGCATCGAACTGCATAAAGCGTGCGCAATCGAGAAC
CACTGGGAAATCATTGTGATACAATCTGCATGCTCCTCGCAACTCAGATC
GTAGTGCATCGACGCCTGTGTAATAGACATCCGATTGGGGAACGATGTGC
ACATAGTACGTGGATTCATGCTGTTTAAGGGTGACCTCAAATTTGGGGTT
ACCCAAGCGCAGCAATATAAACACCATGCTGAGAACAATGCCAAAGAGAA
GACCCAACTCGACGCCAGCCACCAAACAGATGATAAAACTTCCCACCCAG
CTAAAGAAGTCCTTTTTGTTGGTCTGCCATAGCT

BS14061.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG6125-PB 1836 CG6125-RB 1319..1836 534..17 2590 100 Minus
CG6125-PA 1923 CG6125-RA 1406..1923 534..17 2590 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:02:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG6125-RC 2406 CG6125-RC 1458..1975 534..17 2590 100 Minus
CG6125-RA 2153 CG6125-RA 1414..1931 534..17 2590 100 Minus
CG6125-RB 2197 CG6125-RB 1458..1975 534..17 2590 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:02:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15403029..15403384 17..372 1780 100 Plus
3R 32079331 3R 15403439..15403602 371..534 820 100 Plus
Blast to na_te.dros performed on 2015-02-11 19:02:57 has no hits.

BS14061.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:18 Download gff for BS14061.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6125-PA 1406..1923 17..534 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 05:09:13 Download gff for BS14061.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6125-RB 1455..1983 7..534 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:57:12 Download gff for BS14061.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6125-RB 1458..1986 7..534 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 23:57:12 Download gff for BS14061.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15403018..15403382 7..370 98 <- Plus
3R 15403439..15403602 371..534 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 05:09:13 Download gff for BS14061.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11229161..11229324 371..534 100   Plus
arm_3R 11228740..11229104 7..370 98 <- Plus

BS14061.5prime Sequence

645 bp (566 high quality bases) assembled on 2006-10-13

> BS14061.5prime
GAAGTTATCAGTCGACATGCGTTGGCCGCGAAAGCACACGTTCGGCTTGT
GGCCCAAACGAAATGGTCGGAATCGCAGTAGTGGAGAAGCCACTGGGGGG
CAACCCCAGGCCACTGTGGCCACCATTTACGATCCTGGCTGCGAGGAGAA
GGAGAAGTACACGGCCCAGAATGGCGATGATTACTATGGCCAGGCGCACA
CCGTCGACCTGGACGTGGCCAGCAAGTACTCCAAGCCCAAGGAGGCCCAC
TGGCTGGTGCGGCGCATATTCTTCCTCAGCTGGATTACCAGTTACGATCG
AGAGCAGGCGTTCGCCGATTTGATTGCCGGCATCACCTTGGGCCTGACCA
TCATACCACAAAGTATTGCTTATGCCGCGCTGGCAGGACTCTCCTCGGAG
TACGGCCTGTACTCCGCCTTCATTGGCTCCATCATCTATGTTTTCTTTGG
GACGATACCACAGGTGTCCATTGGACCCACCAGTCTGATGGCCATTCTCA
CCCTGCAATTCTGCGCCGACAAACCGGTGCAGGTGGTCATCGTGCTGGCC
TTCCTCGCCGGTTTGGTGGAACTGGCCATGGGTGTGTTCCAGCTGGGATT
CATCGTGAGCTTCATACCAGCTCCGGTTACCCAGGCTTTTACATC

BS14061.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG6125-PA 1923 CG6125-RA 1..629 17..645 3120 99.8 Plus
CG6125-PB 1836 CG6125-RB 32..542 135..645 2530 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6125-RA 2153 CG6125-RA 9..637 17..645 3130 99.8 Plus
CG6125-RC 2406 CG6125-RC 166..681 130..645 2550 99.6 Plus
CG6125-RB 2197 CG6125-RB 166..681 130..645 2550 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15404796..15405306 645..135 2540 99.8 Minus
3R 32079331 3R 15405380..15405497 134..17 590 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:56:28 has no hits.

BS14061.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:18 Download gff for BS14061.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6125-PA 1..629 17..645 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:41:24 Download gff for BS14061.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6125-RA 1..637 10..645 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:01:10 Download gff for BS14061.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6125-RA 1..637 10..645 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:01:10 Download gff for BS14061.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15404796..15405306 135..645 99 <- Minus
3R 15405380..15405508 7..134 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:41:24 Download gff for BS14061.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11230518..11231028 135..645 99 <- Minus
arm_3R 11231102..11231230 7..134 97   Minus

BS14061.pep Sequence

Translation from 16 to 1938

> BS14061.pep
MRWPRKHTFGLWPKRNGRNRSSGEATGGQPQATVATIYDPGCEEKEKYTA
QNGDDYYGQAHTVDLDVASKYSKPKEAHWLVRRIFFLSWITSYDREQAFA
DLIAGITLGLTIIPQSIAYAALAGLSSEYGLYSAFIGSIIYVFFGTIPQV
SIGPTSLMAILTLQFCADKPVQVVIVLAFLAGLVELAMGVFQLGFIVSFI
PAPVTKAFTSGTALIVVFAQIKNLLGVRIKGFPSIGDFFTNIRPTDAAMG
ISCMVVLLSLRLLSQVNFKQDTPVTRRLKKILWYISISRNALVVFFTGLL
VFIWVKKSSIEAVPFALSSKVSSAMPTIKLPPFAFEYQNRTYVFTDILHE
LGSGIVVVPIVAVLANVAIAKAFVKDGNLDASQEMLTLGLCNIAGSFFSA
MPTCGAFTRSAVSQASGVRTPMAGIYTGLIVLSALSILTPYFQYIPKASL
SAVLIAAVIFMIDLAPVKELWQTNKKDFFSWVGSFIICLVAGVELGLLFG
IVLSMVFILLRLGNPKFEVTLKQHESTYYVHIVPQSDVYYTGVDALRSEL
RGACRLYHNDFPVVLDCARFMQFDATFSEMLISVAKEMASHDVLLILQNM
SLKVQQMLPVMGNVRFCQEDSQLSSHLQVEKEAPVVEAKL*

BS14061.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:53:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG6125-PA 640 CG6125-PA 1..640 1..640 3245 100 Plus
CG6125-PC 611 CG6125-PC 9..611 38..640 3027 99.7 Plus
CG6125-PB 611 CG6125-PB 9..611 38..640 3027 99.7 Plus
CG5404-PA 627 CG5404-PA 36..601 74..630 1035 38.9 Plus
CG6928-PA 612 CG6928-PA 6..593 79..640 993 39.2 Plus