Clone BS14062 Report

Search the DGRC for BS14062

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:140
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptCG14995-RC
Protein status:BS14062.pep: full length peptide match
Sequenced Size:1268

Clone Sequence Records

BS14062.complete Sequence

1268 bp assembled on 2009-12-07

GenBank Submission: KX802170

> BS14062.complete
GAAGTTATCAGTCGACATGTCGAGACTCACCGAGGAAATGGTGATAGCGC
GGGCCAAGCAATCCGATTTGTCCCTGATCAAAAAGCTAAATTGCTGGGGC
AGTGATCTCAGCGATGTGTCCATCATCAAGCGAATGCGTGGAGTGGAAGT
TCTGGCTCTTAGTGTCAACAAGATCAGCACGCTGTCGACCTTCGAGGATT
GCACCAAACTGCAGGAGCTATATTTGCGCAAGAACAGCATCTCTGACATC
AACGAGATCGCCTACCTACAAAATCTTCCGAGTCTCAGGAATCTCTGGCT
GGAGGAAAATCCCTGCTGCGAACGAGCGGGTCCCAACTATCGTTCGATCG
TATTACGCGCCCTGCCGAACCTCAAGAAACTCGACAATGTTGAGGTCACA
CAGCAGGAGGTGGAGGATGCGCTGCGTGGAGGCGGAGTCGCCGCACCCGA
GGACGAGGTCTACGAGGATGCATACCAGCAACAGCAGCAGTCGAGGCGAT
CATCGCCGCAGCAGATACTGCAGCAGCAGCAACACAGCTACCCGCAACAC
TCGCCGCCGCCGCAGCAGCAATATCAGCAGCAGCAACAGCAGCAGCAGCA
GCAGCAGCGCGGCTGCACCACTCCCACGAAAGAGGAACCCGTGCATCCGC
CATCGCCCATGTATAACACCATAACCAAAGAGCAGCGCACCTCCTACCAC
CAGTACGATCGCTCGCCGGGATCCGACCAGGAGAGTAGTCCGCACACGTA
CAGGGAGGTGCGGCCCACGCCGTTCCCGCCCAGCATTTCTGCGCACTCGA
TGAAGGAATACTACCAGTCGGACAGACCCGCCTACCCGGCGCACTACCGC
CACAGCCAGACGGACCTAACCGAGTGGGAGGAGCACCAGCAGGTGCCCCA
GGTGCACCACAATCCCTATGGCAGCCAGAAGCAGTTGCACCAGCCGCAGC
GACGCAGCGCAGGTCCGGAGATGACGCCCTATCGTAACGGCAGTGCCCGG
GAGAACGGCGGCGAATGGGATCCGGAGGACAGGTCGAGGGCGAGGCGACC
CGAGGGAAGATATAGTGATGGGACCTCGTCATTGTCGGCCTCTGTGATGA
ATCACTACTCGGGCTACCATCGCAGGCCCATAAATAGGAATTCAAATATT
CTCTCCGCCGCGCTGTGTTTGGTGAAGGAGTTAGACTACGCCAGTCTGGA
GGTTCTGGAGCACGCTGTGCGGTGTCGCATTGATGAGCTGGCGAACGAAT
GAAAGCTTTCTAGACCAT

BS14062.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14995-RC 1236 CG14995-PC 1..1236 17..1252 6180 100 Plus
CG14995-RI 1260 CG14995-PI 1..1122 17..1138 5610 100 Plus
CG14995-RG 1089 CG14995-PG 1..621 17..637 3105 100 Plus
CG14995-RI 1260 CG14995-PI 1146..1260 1138..1252 575 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14995-RC 3043 CG14995-RC 1142..2377 17..1252 6180 100 Plus
CG14995-RI 3067 CG14995-RI 1142..2263 17..1138 5610 100 Plus
CG14995-RG 3229 CG14995-RG 1636..2256 17..637 3105 100 Plus
CG14995-RI 3067 CG14995-RI 2287..2401 1138..1252 575 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:44:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4097506..4097804 635..337 1495 100 Minus
3L 28110227 3L 4095635..4095876 1045..804 1210 100 Minus
3L 28110227 3L 4098026..4098201 336..161 880 100 Minus
3L 28110227 3L 4095009..4095123 1252..1138 575 100 Minus
3L 28110227 3L 4095971..4096067 806..710 485 100 Minus
3L 28110227 3L 4095200..4095295 1138..1043 480 100 Minus
3L 28110227 3L 4101476..4101556 97..17 405 100 Minus
3L 28110227 3L 4096904..4096980 709..633 385 100 Minus
3L 28110227 3L 4100780..4100846 162..96 335 100 Minus
Blast to na_te.dros performed 2014-11-28 01:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6717..6865 459..607 303 70.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6765..6946 474..652 273 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2338..2469 474..608 272 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6801..6938 474..608 269 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2442 474..608 242 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2374..2514 474..608 230 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2359..2530 474..629 211 63.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2815..2965 474..620 204 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2763..2889 473..605 199 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6837..7018 474..652 137 57.5 Plus
roo 9092 roo DM_ROO 9092bp 1074..1149 474..549 136 67.5 Plus

BS14062.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:05 Download gff for BS14062.complete
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1..1236 17..1252 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:00 Download gff for BS14062.complete
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1142..2376 17..1251 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:56:38 Download gff for BS14062.complete
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1142..2376 17..1251 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:34:12 Download gff for BS14062.complete
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1142..2376 17..1251 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:56 Download gff for BS14062.complete
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1142..2376 17..1251 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:56 Download gff for BS14062.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4096904..4096978 635..709 100 <- Minus
3L 4097507..4097804 337..634 100 <- Minus
3L 4098026..4098199 163..336 100 <- Minus
3L 4100780..4100845 97..162 100 <- Minus
3L 4101477..4101556 17..96 100   Minus
3L 4095010..4095122 1139..1251 100 <- Minus
3L 4095200..4095293 1045..1138 100 <- Minus
3L 4095636..4095874 806..1044 100 <- Minus
3L 4095972..4096067 710..805 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:56:38 Download gff for BS14062.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4100780..4100845 97..162 100 <- Minus
arm_3L 4101477..4101556 17..96 100   Minus
arm_3L 4097507..4097804 337..634 100 <- Minus
arm_3L 4096904..4096978 635..709 100 <- Minus
arm_3L 4098026..4098199 163..336 100 <- Minus
arm_3L 4095010..4095122 1139..1251 100 <- Minus
arm_3L 4095200..4095293 1045..1138 100 <- Minus
arm_3L 4095636..4095874 806..1044 100 <- Minus
arm_3L 4095972..4096067 710..805 100 <- Minus

BS14062.3prime Sequence

654 bp (603 high quality bases) assembled on 2006-10-13

> BS14062.3prime
ATGGTCTAGAAAGCTTTCATTCGTTCGCCAGCTCATCAATGCGACACCGC
ACAGCGTGCTCCAGAACCTCCAGACTGGCGTAGTCTAACTCCTTCACCAA
ACACAGCGCGGCGGAGAGAATATTTGAATTCCTATTTATGGGCCTGCGAT
GGTAGCCCGAGTAGTGATTCATCACAGAGGCCGACAATGACGAGGTCCCA
TCACTATATCTTCCCTCGGGTCGCCTCGCCCTCGACCTGTCCTCCGGATC
CCATTCGCCGCCGTTCTCCCGGGCACTGCCGTTACGATAGGGCGTCATCT
CCGGACCTGCGCTGCGTCGCTGCGGCTGGTGCAACTGCTTCTGGCTGCCA
TAGGGATTGTGGTGCACCTGGGGCACCTGCTGGTGCTCCTCCCACTCGGT
TAGGTCCGTCTGGCTGTGGCGGTAGTGCGCCGGGTAGGCGGGTCTGTCCG
ACTGGTAGTATTCCTTCATCGAGTGCGCAGAAATGCTGGGCGGGAACGGC
GTGGGCCGCACCTCCCTGTACGTGTGCGGACTACTCTCCTGGTCGGATCC
CGGCGAGCGATCGTACTGGTGGTAGGAGGTGCGCTGCTCTTTGGTTATGG
TGTTATACATGGGCGATGGCGGATGCACGGGTTCCTCTTTTCGTGGAGTG
GTGC

BS14062.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:23:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14995-PC 1236 CG14995-RC 613..1236 640..17 3120 100 Minus
CG14995-PA 1365 CG14995-RA 746..1365 636..17 3100 100 Minus
CG14995-PB 1170 CG14995-RB 722..1170 465..17 2245 100 Minus
CG14995-PD 1065 CG14995-RD 617..1065 465..17 2245 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14995-RC 3043 CG14995-RC 1740..2377 654..17 3145 99.7 Minus
CG14995-RA 3435 CG14995-RA 2150..2769 636..17 3100 100 Minus
CG14995-RF 3344 CG14995-RF 2059..2678 636..17 3100 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4095635..4095876 224..465 1210 100 Plus
3L 28110227 3L 4095009..4095123 17..131 575 100 Plus
3L 28110227 3L 4095971..4096067 463..559 485 100 Plus
3L 28110227 3L 4095200..4095295 131..226 480 100 Plus
3L 28110227 3L 4096904..4096980 560..636 385 100 Plus
Blast to na_te.dros performed on 2015-02-11 19:03:02 has no hits.

BS14062.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:19 Download gff for BS14062.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14995-PC 599..1236 17..654 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 05:09:16 Download gff for BS14062.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1740..2377 17..654 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:57:27 Download gff for BS14062.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1740..2377 17..654 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 23:57:27 Download gff for BS14062.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4095009..4095122 17..130 100 <- Plus
3L 4095200..4095293 131..224 100 <- Plus
3L 4095636..4095874 225..463 100 <- Plus
3L 4095972..4096067 464..559 100 <- Plus
3L 4096904..4096980 560..636 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 05:09:16 Download gff for BS14062.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4095009..4095122 17..130 100 <- Plus
arm_3L 4095200..4095293 131..224 100 <- Plus
arm_3L 4095636..4095874 225..463 100 <- Plus
arm_3L 4095972..4096067 464..559 100 <- Plus
arm_3L 4096904..4096980 560..636 100   Plus

BS14062.5prime Sequence

681 bp (627 high quality bases) assembled on 2006-10-13

> BS14062.5prime
GAAGTTATCAGTCGACATGTCGAGACTCACCGAGGAAATGGTGATAGCGC
GGGCCAAGCAATCCGATTTGTCCCTGATCAAAAAGCTAAATTGCTGGGGC
AGTGATCTCAGCGATGTGTCCATCATCAAGCGAATGCGTGGAGTGGAAGT
TCTGGCTCTTAGTGTCAACAAGATCAGCACGCTGTCGACCTTCGAGGATT
GCACCAAACTGCAGGAGCTATATTTGCGCAAGAACAGCATCTCTGACATC
AACGAGATCGCCTACCTACAAAATCTTCCGAGTCTCAGGAATCTCTGGCT
GGAGGAAAATCCCTGCTGCGAACGAGCGGGTCCCAACTATCGTTCGATCG
TATTACGCGCCCTGCCGAACCTCAAGAAACTCGACAATGTTGAGGTCACA
CAGCAGGAGGTGGAGGATGCGCTGCGTGGAGGCGGAGTCGCCGCACCCGA
GGACGAGGTCTACGAGGATGCATACCAGCAACAGCAGCAGTCGAGGCGAT
CATCGCCGCAGCAGATACTGCAGCAGCAGCAACACAGCTACCCGCAACAC
TCGCCGCCGCCGCAGCAGCAATATCAGCAGCAGCAACAGCAGCAGCAGCA
GCAGCAGCGCGGCTGCACCACTCCCACGAAAGAGGAACCCGTGCATCCGC
CATCGCCCATGTATAACACCATAAACCAAGA

BS14062.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:23:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14995-PC 1236 CG14995-RC 1..658 17..674 3290 100 Plus
CG14995-PD 1065 CG14995-RD 1..621 17..637 3105 100 Plus
CG14995-PA 1365 CG14995-RA 1..618 17..634 3090 100 Plus
CG14995-PB 1170 CG14995-RB 185..726 96..637 2710 100 Plus
CG14995-PA 1365 CG14995-RA 746..787 633..674 210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:16:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14995-RI 3067 CG14995-RI 1142..1806 17..681 3295 99.7 Plus
CG14995-RC 3043 CG14995-RC 1142..1806 17..681 3295 99.7 Plus
CG14995-RG 3229 CG14995-RG 1636..2256 17..637 3105 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4097506..4097804 635..337 1495 100 Minus
3L 28110227 3L 4098026..4098201 336..161 880 100 Minus
3L 28110227 3L 4101476..4101556 97..17 405 100 Minus
3L 28110227 3L 4100780..4100846 162..96 335 100 Minus
3L 28110227 3L 4096932..4096980 681..633 215 95.9 Minus
Blast to na_te.dros performed 2015-02-10 15:15:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6717..6865 459..607 303 70.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6765..6946 474..652 273 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2338..2469 474..608 272 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6801..6938 474..608 269 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2442 474..608 242 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2374..2514 474..608 230 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2359..2530 474..629 211 63.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2815..2965 474..620 204 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2763..2889 473..605 199 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6837..7018 474..652 137 57.5 Plus
roo 9092 roo DM_ROO 9092bp 1074..1149 474..549 136 67.5 Plus
roo 9092 roo DM_ROO 9092bp 1089..1157 474..541 108 63.8 Plus

BS14062.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:19 Download gff for BS14062.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14995-PC 1..662 17..680 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:37:58 Download gff for BS14062.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1136..1803 9..680 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:56 Download gff for BS14062.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14995-RC 1136..1803 9..680 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:11:56 Download gff for BS14062.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4096933..4096978 635..680 95 <- Minus
3L 4097507..4097804 337..634 100 <- Minus
3L 4098026..4098199 163..336 100 <- Minus
3L 4100780..4100845 97..162 100 <- Minus
3L 4101477..4101560 9..96 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:37:58 Download gff for BS14062.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4096933..4096978 635..680 95 <- Minus
arm_3L 4097507..4097804 337..634 100 <- Minus
arm_3L 4098026..4098199 163..336 100 <- Minus
arm_3L 4100780..4100845 97..162 100 <- Minus
arm_3L 4101477..4101560 9..96 95   Minus

BS14062.pep Sequence

Translation from 16 to 1251

> BS14062.pep
MSRLTEEMVIARAKQSDLSLIKKLNCWGSDLSDVSIIKRMRGVEVLALSV
NKISTLSTFEDCTKLQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPC
CERAGPNYRSIVLRALPNLKKLDNVEVTQQEVEDALRGGGVAAPEDEVYE
DAYQQQQQSRRSSPQQILQQQQHSYPQHSPPPQQQYQQQQQQQQQQQRGC
TTPTKEEPVHPPSPMYNTITKEQRTSYHQYDRSPGSDQESSPHTYREVRP
TPFPPSISAHSMKEYYQSDRPAYPAHYRHSQTDLTEWEEHQQVPQVHHNP
YGSQKQLHQPQRRSAGPEMTPYRNGSARENGGEWDPEDRSRARRPEGRYS
DGTSSLSASVMNHYSGYHRRPINRNSNILSAALCLVKELDYASLEVLEHA
VRCRIDELANE*

BS14062.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:02:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14995-PC 411 CG14995-PC 1..411 1..411 2181 100 Plus
CG14995-PI 419 CG14995-PI 1..419 1..411 2162 98.1 Plus
CG14995-PA 454 CG14995-PA 1..454 1..411 2127 90.5 Plus
CG14995-PD 354 CG14995-PD 1..354 1..411 1745 84.9 Plus
CG14995-PG 362 CG14995-PG 1..362 1..411 1726 83.3 Plus