Clone BS14067 Report

Search the DGRC for BS14067

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:140
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG2698-RA
Protein status:BS14067.pep: full length peptide match
Sequenced Size:2486

Clone Sequence Records

BS14067.complete Sequence

2486 bp assembled on 2009-12-07

GenBank Submission: KX802215

> BS14067.complete
GAAGTTATCAGTCGACATGAATCGGTCCGAACCGATTCCCATTCGACGGG
ACCGCTCTTTTGACAGTGTGATCAACCGCCTGCTCCGTATGAGGTCCCAG
AATCATGAGAGCTTTCGCGCCGCCATGTACAATTTCCTGATCGCCGCAGG
AGTTGCGGCATTCGTCGCTGTGTGCTTCATTCTTGGGCCCTTCGTCCGTC
CATTGCTGTGGGCCTTCCTCATGGGCGCCGTGCTCTTTCCATTCAAGCGA
CGTTTGGCGGAGAGCGTAAACAGTTGGTTTCACCGCTTGGAGGTGCGCGA
CTCCAATGTACTGGTTTCGATCTGCCTATCGCCGCTGGAAGCCACAGAGC
ATTGCGGGCGGTTGCTGATCGGGTGGCTCTGCGAACACTGGCAACTCCTC
CTGGCCGGATGCGGAGTGGCCGGGTGCATTAAGCTGCTGGTTTTATATGC
ACCGAAGGGTTTTCTGCTGGCCATCTGGCATTGGATCACCTTTTCCCATG
GCTTGTTCGTTCAAATTATTGGATTCCTCAACGTATACGTGCTCATTTCC
TTGATCGTGGTCTACTTGAGCTGCGTCCACTTCTTTTGGAGGCCAGAGAA
TAGTGCCCACTTCGTGGTCGCCGGACAATCCATGTGGATAGCTGTAGCGG
GCTATCTGAGTAGCTTTCTTGGCGCCCTGCAGGTGCCGGTATTTCTACTG
GTTATGACCTATGTAACAGCATCTACGGCATATCATCTGCAAACCCTAGA
TGATTCGGGATCTTATCTTCACCGCCTGCAAAAGTTGTTCGACAAGAACG
ATTTTGAGCGATCGCTAAGCAACTTCAGCATTTGTGGCAGACCAGGCAAC
GAGCCACTGAGTCCGGGGCTGCAGTCGGATGTGGAGGATGTATCGTTAAG
TGACACTGTCGACTCGACGGACACGTTTGATGTCAAGCCAGAAACGGAGG
TTCCCAGTCACCAGAGCGACACATTCTTTAAGCTCCTTTTTTATGCCTGC
TTGGGCACATTCCTCTATCGCAACGTGTGGATGTTTATCCTAGCGGCAAT
CCCAGTAATTCTGCATCTTATTTACACCGTAGGAGAGTATACGGGAATTA
CTAAATTTGTTTGCAACAAAATTAGCGAAGTTTACGCAGCGCTGCGTTTC
TGGGCAATCGAACACCATTCTGCCGTGCTGCCACTCTGTCTACCTGGTGT
CCTGGAACTAAACTATAAAATCAACACTATCGTGCGGGATTCACTAAAGG
CCTCCGTTGAATCAGTCACCTCCATCCTAATGATCATCCTCATGCTGCTT
ATCATCGTGTTTCTAAGCGTGTTCTTCTGCGTGAACATTTACTCGGAGAC
GATTGAGGTGGCTTACCTGGGCAAGGATTTAATTAACAAGACGATCACAG
ATCGGCCTGAGCTAATTGACATCTTGCCTGCCAACATGCAATCGTCCATC
GAGGATGCTCTTGATAACGCACACCATTATGGTCGCCGTAAGATTGAAAC
CTACATAGACGACTGGCTGGCAGACGCCGATAAGGTGCACGCCACCAAGT
TGAAGGAGCAGATCCTCGAAGTGTGGGACCGGCTCATCCAGTATTGGATC
GATTTCAATAAGGCCGGTTCATCGTACGGGCCGCGGGTACCAACGGATGC
CCTGAAAAGCACATTTGGCGAAATCGTCGACAATCCAGAGCTAGTTTTAG
TGGCAAAACAGGGCATTATCGGCTGGGCGCAGAGCAATACGCAGACGATC
CTCGAGGTTGCAGAGTCGTTGTGGCACATCATCCGGACCAACATGTCCAT
GATAATGGGCGTGACCGGGGAGATTCTATCCCTTGTGCTTTCGGGTGGAC
AAGCGTGCATTGAGTTTATTCTAGATATGATTGTATTCTTTACGGCTCTG
TTCTACCTGCTCTCGAGCAGTCAGGAGAAGTACGCGCCCCTGCAGATCAC
AAAATACCTGGGCTATTCCAGCTCGGGTATCAAAATCGCCGATGCCCTGG
AAAACTCCATTACCGTAGTCCTAGTCTCAATGTTTAGGTGCTCCACCTTT
ACGGGTCTGTTCACCTGGTTAGTCCATACGGTTTTCGGGGCCCGGATTGT
GTTCCTGCCGTCCGCCTTGGCAGCTATGTTGGCTGCTGCTCCTTTCCTAG
GCAGTTACTGGTGTGCGGTGCCAGCCTTTCTAGAGCTTTGGCTGGCCCAG
GACCGCTTCTATGCAGGACTTATATTGTTCCTGCTTCAGTTTTTCGTGCC
ATCATCTTTTGAAACTGCTATATATGCGGACCTCAAAGGTGGACATCCCT
ACCTCAACGGCCTGGCCATAGCAGGCGGAATGTATTGGATCGGTTGGCAA
GGAGCTATTTTCGGACCCCTTATGCTTTGCTTCTTCATCGGCCTTTTTGA
GGTGGCCACGCTGGCCATGCGCAGTCATCAAGAGCCCAGGAACAGTACGG
ACGAGGAGCGGACCACGTGAAAGCTTTCTAGACCAT

BS14067.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-RA 2454 CG2698-PA 1..2454 17..2470 12270 100 Plus
CG2698-RD 2610 CG2698-PD 1..2450 17..2466 12250 100 Plus
CG2698-RE 2466 CG2698-PE 1..2466 17..2470 12115 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-RA 3150 CG2698-RA 262..2715 17..2470 12270 100 Plus
CG2698-RD 2988 CG2698-RD 262..2711 17..2466 12250 100 Plus
CG2698-RE 3162 CG2698-RE 262..2727 17..2470 12115 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8002553..8003159 541..1147 3035 100 Plus
3R 32079331 3R 8003220..8003760 1148..1688 2705 100 Plus
3R 32079331 3R 8001922..8002458 17..553 2640 99.4 Plus
3R 32079331 3R 8004237..8004647 1879..2289 2055 100 Plus
3R 32079331 3R 8003986..8004178 1687..1879 965 100 Plus
3R 32079331 3R 8004713..8004864 2289..2440 760 100 Plus
Blast to na_te.dros performed 2014-11-28 02:08:31
Subject Length Description Subject Range Query Range Score Percent Strand
G-element 4346 G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). 3311..3385 1194..1269 134 65.8 Plus

BS14067.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:46:07 Download gff for BS14067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2698-RA 240..2692 17..2469 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:01 Download gff for BS14067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2698-RA 262..2714 17..2469 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:18:56 Download gff for BS14067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2698-RA 240..2692 17..2469 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:53 Download gff for BS14067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2698-RA 262..2714 17..2469 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:53 Download gff for BS14067.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8001922..8002446 17..541 100 -> Plus
3R 8002554..8003159 542..1147 100 -> Plus
3R 8003220..8003760 1148..1688 100 -> Plus
3R 8003988..8004178 1689..1879 100 -> Plus
3R 8004238..8004647 1880..2289 100 -> Plus
3R 8004714..8004863 2290..2439 100 -> Plus
3R 8005254..8005283 2440..2469 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:01 Download gff for BS14067.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3830436..3830585 2290..2439 100 -> Plus
arm_3R 3830976..3831005 2440..2469 100   Plus
arm_3R 3829960..3830369 1880..2289 100 -> Plus
arm_3R 3827644..3828168 17..541 100 -> Plus
arm_3R 3828276..3828881 542..1147 100 -> Plus
arm_3R 3828942..3829482 1148..1688 100 -> Plus
arm_3R 3829710..3829900 1689..1879 100 -> Plus

BS14067.3prime Sequence

654 bp (544 high quality bases) assembled on 2006-10-13

> BS14067.3prime
ATGGTCTAGAAAGCTTTCACGTGGTCCGCTCCTCGTCCGTACTGTTCCTG
GGCTCTTGATGACTGCGCATGGCCAGCGTGGCCACCTCAAAAAGGCCGAT
GAAGAAGCAAAGCATAAGGGGTCCGAAAATAGCTCCTTGCCAACCGATCC
AATACATTCCGCCTGCTATGGCCAGGCCGTTGAGGTAGGGATGTCCACCT
TTGAGGTCCGCATATATAGCAGTTTCAAAAGATGATGGCACGAAAAACTG
AAGCAGGAACAATATAAGTCCTGCATAGAAGCGGTCCTGGGCCAGCCAAA
GCTCTAGAAAGGCTGGCACCGCACACCAGTAACTGCCTAGGAAAGGAGCA
GCAGCCAACATAGCTGCCAAGGCGGACGGCAGGAACACAATCCGGGCCCC
GAAAACCGTATGGACTAACCAGGTGAACAGACCCGTAAAGGTGGAGCACC
TAAACATTGAGACTAGGACTACGGTAATGGAGTTTTCCAGGGCATCGGCG
ATTTTGATACCCGAGCTGGAATAGCCCAGGTATTTTGTGATCTGCAGGGG
CGCGTACTTCTCCTGAATGCTCGAAAGCAGGTAGAACAGAGCCGTAAAGA
ATACAATCATATCTAGAATAAACTCAATGCACGCTTGTCCACCCGAAAGC
ACAA

BS14067.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:24:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-PA 2454 CG2698-RA 1817..2454 654..17 3140 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-RG 3138 CG2698-RG 2066..2703 654..17 3160 99.7 Minus
CG2698-RE 3162 CG2698-RE 2090..2727 654..17 3160 99.7 Minus
CG2698-RC 3377 CG2698-RC 2305..2942 654..17 3160 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8004237..8004647 608..198 2025 99.5 Minus
3R 32079331 3R 8004713..8004864 198..47 760 100 Minus
3R 32079331 3R 8004132..8004178 654..608 235 100 Minus
Blast to na_te.dros performed on 2015-02-13 07:23:44 has no hits.

BS14067.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:22 Download gff for BS14067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-PA 1819..2454 17..652 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:43:58 Download gff for BS14067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-RC 2307..2945 11..652 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:27:28 Download gff for BS14067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-RC 2307..2945 11..652 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:27:28 Download gff for BS14067.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8004134..8004178 608..652 100 -> Minus
3R 8004238..8004647 198..607 99 -> Minus
3R 8004714..8004863 48..197 100 -> Minus
3R 8005254..8005287 11..47 91   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:43:58 Download gff for BS14067.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3829856..3829900 608..652 100 -> Minus
arm_3R 3829960..3830369 198..607 99 -> Minus
arm_3R 3830436..3830585 48..197 100 -> Minus
arm_3R 3830976..3831009 11..47 91   Minus

BS14067.5prime Sequence

679 bp (677 high quality bases) assembled on 2006-10-13

> BS14067.5prime
GAAGTTATCAGTCGACATGAATCGGTCCGAACCGATTCCCATTCGACGGG
ACCGCTCTTTTGACAGTGTGATCAACCGCCTGCTCCGTATGAGGTCCCAG
AATCATGAGAGCTTTCGCGCCGCCATGTACAATTTCCTGATCGCCGCAGG
AGTTGCGGCATTCGTCGCTGTGTGCTTCATTCTTGGGCCCTTCGTCCGTC
CATTGCTGTGGGCCTTCCTCATGGGCGCCGTGCTCTTTCCATTCAAGCGA
CGTTTGGCGGAGAGCGTAAACAGTTGGTTTCACCGCTTGGAGGTGCGCGA
CTCCAATGTACTGGTTTCGATCTGCCTATCGCCGCTGGAAGCCACAGAGC
ATTGCGGGCGGTTGCTGATCGGGTGGCTCTGCGAACACTGGCAACTCCTC
CTGGCCGGATGCGGAGTGGCCGGGTGCATTAAGCTGCTGGTTTTATATGC
ACCGAAGGGTTTTCTGCTGGCCATCTGGCATTGGATCACCTTTTCCCATG
GCTTGTTCGTTCAAATTATTGGATTCCTCAACGTATACGTGCTCATTTCC
TTGATCGTGGTCTACTTGAGCTGCGTCCACTTCTTTTGGAGGCCAGAGAA
TAGTGCCCACTTCGTGGTCGCCGGACAATCCATGTGGATAGCTGTAGCGG
GCTATCTGAGTAGCTTTCTTGGCGCCCTG

BS14067.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-PA 2454 CG2698-RA 1..663 17..679 3315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:48:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-RI 3147 CG2698-RI 262..924 17..679 3315 100 Plus
CG2698-RH 2976 CG2698-RH 262..924 17..679 3315 100 Plus
CG2698-RG 3138 CG2698-RG 262..924 17..679 3315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8001922..8002458 17..553 2640 99.4 Plus
3R 32079331 3R 8002553..8002691 541..679 695 100 Plus
Blast to na_te.dros performed on 2015-02-12 16:48:52 has no hits.

BS14067.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:23 Download gff for BS14067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-PA 1..663 17..679 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:08:42 Download gff for BS14067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-RG 262..924 17..679 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:34:50 Download gff for BS14067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2698-RG 262..924 17..679 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:34:50 Download gff for BS14067.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8001922..8002446 17..541 100 -> Plus
3R 8002554..8002691 542..679 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:08:42 Download gff for BS14067.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3827644..3828168 17..541 100 -> Plus
arm_3R 3828276..3828413 542..679 100   Plus

BS14067.pep Sequence

Translation from 16 to 2469

> BS14067.pep
MNRSEPIPIRRDRSFDSVINRLLRMRSQNHESFRAAMYNFLIAAGVAAFV
AVCFILGPFVRPLLWAFLMGAVLFPFKRRLAESVNSWFHRLEVRDSNVLV
SICLSPLEATEHCGRLLIGWLCEHWQLLLAGCGVAGCIKLLVLYAPKGFL
LAIWHWITFSHGLFVQIIGFLNVYVLISLIVVYLSCVHFFWRPENSAHFV
VAGQSMWIAVAGYLSSFLGALQVPVFLLVMTYVTASTAYHLQTLDDSGSY
LHRLQKLFDKNDFERSLSNFSICGRPGNEPLSPGLQSDVEDVSLSDTVDS
TDTFDVKPETEVPSHQSDTFFKLLFYACLGTFLYRNVWMFILAAIPVILH
LIYTVGEYTGITKFVCNKISEVYAALRFWAIEHHSAVLPLCLPGVLELNY
KINTIVRDSLKASVESVTSILMIILMLLIIVFLSVFFCVNIYSETIEVAY
LGKDLINKTITDRPELIDILPANMQSSIEDALDNAHHYGRRKIETYIDDW
LADADKVHATKLKEQILEVWDRLIQYWIDFNKAGSSYGPRVPTDALKSTF
GEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVT
GEILSLVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGY
SSSGIKIADALENSITVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSA
LAAMLAAAPFLGSYWCAVPAFLELWLAQDRFYAGLILFLLQFFVPSSFET
AIYADLKGGHPYLNGLAIAGGMYWIGWQGAIFGPLMLCFFIGLFEVATLA
MRSHQEPRNSTDEERTT*

BS14067.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:07:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG2698-PD 869 CG2698-PD 1..817 1..817 4250 100 Plus
CG2698-PA 817 CG2698-PA 1..817 1..817 4250 100 Plus
CG2698-PE 821 CG2698-PE 1..821 1..817 4235 99.5 Plus
CG2698-PH 865 CG2698-PH 1..813 1..817 4218 99.5 Plus
CG2698-PG 813 CG2698-PG 1..813 1..817 4218 99.5 Plus