Clone BS14070 Report

Search the DGRC for BS14070

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:140
Well:70
Vector:pDNR-Dual
Associated Gene/Transcriptyuri-RC
Protein status:BS14070.pep: full length peptide match
Sequenced Size:1769

Clone Sequence Records

BS14070.complete Sequence

1769 bp assembled on 2009-12-07

GenBank Submission: KX801013

> BS14070.complete
GAAGTTATCAGTCGACATGGCCAGTCGCCAAGCCGGTTTCGTCCTAGACG
CCAAGTCCATGGGTCTGAATCCGTCGAGACCTGCATCATCGCCACCGCCA
CCACCATCATCTGCCAGTCAAATGTGTCGGCAAGTGCAGCCAACCGGAAC
GAGTGCCTCGCATCCACATCAAGAATCGACGCTAAAAGCCTCATCTCCTG
ATCGGTGCACTGCCAGCACCGAGGCGATGTCCACCGAACATTACCGCTGT
CTGATCCAGAAGCTGCGGGATACCAACGGCGATGCTGGCGATATGAGCTT
TGAGCTGAACAGCATATTTCTGAAGCGGCTGGACGAGATTGACTGCCTAG
ATGAGCACGAGGGTGATGACATGCACACTTGCCAGTTGCGTCTGGTCACT
TTTCAGGAGTGGGTGGATTTCCTGCTCCACGTGAACAGCGTGATCCTGGG
CAACGTGTCGGACTTGGAGAAGGAGGCGTACAGCAAGATCGTTGCCTGCT
GTCAGTCTGTCCAAGTGCGACAACAGCATACCCTCGAGGAGAATCGTAGG
CTGCGTGAGGACATTTGTGCGATCATAGAACGCGTGCAGCATTCTCCTCA
CTGCACCGACTTTGATTTCAATGGCATTTCCCTAGAGACACTGACCGTTA
ATCAATTGCGGGGCGTGGGAAAGGATCCCGCCCACGCGGAATGCGAGAGC
GAGAAGATGTCCGAGAGCATGAAGTCCTTAGTCGGCGAGATAGCCGCCAA
GCATGACGAGATCGGCGAACTGAAGTCACAGATCAATGCCTTGGACGAGG
TTGTACACACGGCCAGGCAGAAGTTACTTTTGAAGGATCAGTGCATAGCA
CAGCTCAATCAACAGCTGCACGAGATCACCCGGTGCATTGAGTCCAGAGA
TCAGGCCAAAATGGAGGAATCGCCCAACGATACACTGACCGCGGACGCGA
TTACAAGCGATATGCTCGAGAATCTCTCGATCCACGACACCCAGGAGAGC
GAAATGCTGCGGCTGCTAAACGCGGAGCTCAATGATCTTCTCGATCTGCA
CAACAAACAGGAGTTCCAGACCATTGAGATTCGGCGAAAACGTGTGTCCT
GCTTTATCGAAAAACTGGTATCCGAGCGTGAGGACACTCTGAAAAAACTC
GAGAGCATTCGTAGTCATCTGACAATCCTTCAGTCAGACCTCGATCAATC
CTGCCTAATCTCCGTTGATCCCGAATCAGGGCCCTGTGATCTGGACGCGG
ATGCTCAGATGCTGGAAGCTCTACGTAGACGCCTGCTCAACCTTAGCCAA
CTTAATCGAGAACTGCACGGAAAGTACCAGCGCCTGGACACCGAGTCGAA
AATCAAAATTTCAGAGCTGGAGGCGAGGATTGAATCGGAAAGCAGCGTTC
TTCAAAGAAATAGCGATGTTCTAAGGGAGATCGCCGAACTCATCTGCTCG
TTGGGTTCCAAGGAGTTCTCCTACAACGAAATCTACGACGAATCCTCGAA
AGAAAATCCATTTTGTACGACCATTGCGGATATGTTTGCACGGAAATTCG
AGCAGGAGCAAAATCAAGTGGAAATTGAATGCGATACGAAAACACCTTCC
CAAACAAGGAAGCCAACCAAAACCACCAAAATCCCGGGAGCCACGGCAAA
AACAAACAAACAACAACCAACACCTAAACCTTCAAACAAGCCAACGACAA
CTAAAACTATACCAACGAAAAACACAACTACAACGTTTAGGACCTCCAAG
TAAAAGCTTTCTAGACCAT

BS14070.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
yuri-RC 1737 CG31732-PC 1..1737 17..1753 8685 100 Plus
yuri-RD 1695 CG31732-PD 1..1695 59..1753 8475 100 Plus
yuri-RQ 2946 CG31732-PQ 1..1560 17..1576 7800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
yuri-RC 2555 CG31732-RC 566..2303 16..1753 8690 100 Plus
yuri-RD 2500 CG31732-RD 542..2248 47..1753 8535 100 Plus
yuri-RQ 3658 CG31732-RQ 566..2126 16..1576 7805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15263770..15264127 373..16 1790 100 Minus
2L 23513712 2L 15263332..15263665 706..373 1670 100 Minus
2L 23513712 2L 15262373..15262631 1119..861 1295 100 Minus
2L 23513712 2L 15262070..15262305 1352..1117 1180 100 Minus
2L 23513712 2L 15261461..15261637 1753..1577 885 100 Minus
2L 23513712 2L 15262970..15263130 865..705 805 100 Minus
2L 23513712 2L 15261717..15261841 1577..1453 625 100 Minus
2L 23513712 2L 15261911..15262016 1454..1349 515 99.1 Minus
Blast to na_te.dros performed on 2014-11-28 02:08:12 has no hits.

BS14070.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:46:03 Download gff for BS14070.complete
Subject Subject Range Query Range Percent Splice Strand
yuri-RC 565..2299 17..1751 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:50 Download gff for BS14070.complete
Subject Subject Range Query Range Percent Splice Strand
yuri-RC 567..2301 17..1751 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:23:47 Download gff for BS14070.complete
Subject Subject Range Query Range Percent Splice Strand
yuri-RC 565..2299 17..1751 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:47 Download gff for BS14070.complete
Subject Subject Range Query Range Percent Splice Strand
yuri-RC 567..2301 17..1751 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:47 Download gff for BS14070.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15261463..15261637 1577..1751 100 <- Minus
2L 15261718..15261840 1454..1576 100 <- Minus
2L 15261912..15262012 1353..1453 100 <- Minus
2L 15262070..15262304 1118..1352 100 <- Minus
2L 15262375..15262626 866..1117 100 <- Minus
2L 15262970..15263128 707..865 100 <- Minus
2L 15263332..15263664 374..706 100 <- Minus
2L 15263770..15264126 17..373 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:50 Download gff for BS14070.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15261718..15261840 1454..1576 100 <- Minus
arm_2L 15261912..15262012 1353..1453 100 <- Minus
arm_2L 15262070..15262304 1118..1352 100 <- Minus
arm_2L 15262375..15262626 866..1117 100 <- Minus
arm_2L 15262970..15263128 707..865 100 <- Minus
arm_2L 15261463..15261637 1577..1751 100 <- Minus
arm_2L 15263332..15263664 374..706 100 <- Minus
arm_2L 15263770..15264126 17..373 100   Minus

BS14070.3prime Sequence

588 bp (481 high quality bases) assembled on 2006-10-13

> BS14070.3prime
ATGGTCTAGAAAGCTTTTACTTGGAGGTCCTAAACGTTGTAGTTGTGTTT
TTCGTTGGTATAGTTTTAGTTGTCGTTGGCTTGTTTGAAGGTTTAGGTGT
TGGTTGTTGTTTGTTTGTTTTTGCCGTGGCTCCCGGGATTTTGGTGGTTT
TGGTTGGCTTCCTTGTTTGGGAAGGTGTTTTCGTATCGCATTCAATTTCC
ACTTGATTTTGCTCCTGCTCGAATTTCCGTGCAAACATATCCGCAATGGT
CGTACAAAATGGATTTTCTTTCGAGGATTCGTCGTAGATTTCGTTGTAGG
AGAACTCCTTGGAACCCAACGAGCAGATGAGTTCGGCGATCTCCCTTAGA
ACATCGCTATTTCTTTGAAGAACGCTGCTTTCCGATTCAATCCTCGCCTC
CAGCTCTGAAATTTTGATTTTCGACTCGGTGTCCAGGCGCTGGTACTTTC
CGTGCAGTTCTCGATTAAGTTGGCTAAGGTTGAGCANGCGTCTACGTAGA
GCTTCCAGCATCTGAGCATCCGCGTCCAGATCACAGGGCCCTGATTCGGG
ATCAACGGAAATTAGGCAGGATTGATCGAGGTCTGACT

BS14070.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:25:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG31732-PC 1737 yuri-RC 1166..1737 588..17 2816 99.6 Minus
CG31732-PD 1695 yuri-RD 1124..1695 588..17 2816 99.6 Minus
CG31732-PH 1047 yuri-RH 476..1047 588..17 2816 99.6 Minus
CG31732-PB 2673 yuri-RB 1166..1560 588..194 1931 99.4 Minus
CG31732-PE 1779 yuri-RE 272..666 588..194 1931 99.4 Minus
CG31732-PF 1983 yuri-RF 476..870 588..194 1931 99.4 Minus
CG31732-PG 2217 yuri-RG 272..666 588..194 1931 99.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:03:20
Subject Length Description Subject Range Query Range Score Percent Strand
yuri-RD 2500 CG31732-RD 1677..2248 588..17 2834 99.7 Minus
yuri-RC 2555 CG31732-RC 1732..2303 588..17 2834 99.7 Minus
yuri-RQ 3658 CG31732-RQ 1732..2126 588..194 1949 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:03:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15261461..15261637 17..193 885 100 Plus
2L 23513712 2L 15262070..15262240 418..588 829 98.8 Plus
2L 23513712 2L 15261717..15261841 193..317 625 100 Plus
2L 23513712 2L 15261911..15262016 316..421 515 99.1 Plus
Blast to na_te.dros performed on 2015-02-11 19:03:18 has no hits.

BS14070.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:25 Download gff for BS14070.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31732-PH 476..1047 17..588 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 05:09:20 Download gff for BS14070.3prime
Subject Subject Range Query Range Percent Splice Strand
yuri-RC 1732..2305 12..588 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:58:22 Download gff for BS14070.3prime
Subject Subject Range Query Range Percent Splice Strand
yuri-RC 1732..2305 12..588 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 23:58:22 Download gff for BS14070.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 15262070..15262240 418..588 98   Plus
2L 15261459..15261637 12..193 98 <- Plus
2L 15261718..15261840 194..316 100 <- Plus
2L 15261912..15262012 317..417 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 05:09:20 Download gff for BS14070.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15261459..15261637 12..193 98 <- Plus
arm_2L 15261718..15261840 194..316 100 <- Plus
arm_2L 15261912..15262012 317..417 100 <- Plus
arm_2L 15262070..15262240 418..588 98   Plus

BS14070.5prime Sequence

595 bp (507 high quality bases) assembled on 2006-10-13

> BS14070.5prime
GAAGTTATCAGTCGACATGGCCAGTCGCCAAGCCGGTTTCGTCCTAGACG
CCAAGTCCATGGGTCTGAATCCGTCGAGACCTGCATCATCGCCACCGCCA
CCACCATCATCTGCCAGTCAAATGTGTCGGCAAGTGCAGCCAACCGGAAC
GAGTGCCTCGCATCCACATCAAGAATCGACGCTAAAAGCCTCATCTCCTG
ATCGGTGCACTGCCAGCACCGAGGCGATGTCCACCGAACATTACCGCTGT
CTGATCCAGAAGCTGCGGGATACCAACGGCGATGCTGGCGATATGAGCTT
TGAGCTGAACAGCATATTTCTGAAGCGGCTGGACGAGATTGACTGCCTAG
ATGAGCACGAGGGTGATGACATGCACACTTGCCAGTTGCGTCTGGTCACT
TTTCAGGAGTGGGTGGATTTCCTGCTCCACGTGAACAGCGTGATCCTGGG
CAACGTGTCGGACTTGGAGAAGGAGGCGTACAGCAAGATCGTTGCCTGCT
GTCAGTCTGTCCAAGTGCGACAACAGCATACCCTCGAGGAGAATCGTANG
CTGCGTGAGGACATTTGTGCGATCATAGAACGCGTGCAGCATTCT

BS14070.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31732-PB 2673 yuri-RB 1..579 17..595 2876 99.8 Plus
CG31732-PC 1737 yuri-RC 1..579 17..595 2876 99.8 Plus
CG31732-PD 1695 yuri-RD 1..537 59..595 2666 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:56:41
Subject Length Description Subject Range Query Range Score Percent Strand
yuri-RQ 3658 CG31732-RQ 566..1145 16..595 2889 99.8 Plus
yuri-RI 956 CG31732-RI 101..680 16..595 2889 99.8 Plus
yuri-RC 2555 CG31732-RC 566..1145 16..595 2889 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15263770..15264127 373..16 1790 100 Minus
2L 23513712 2L 15263443..15263665 595..373 1104 99.6 Minus
Blast to na_te.dros performed on 2015-02-12 11:56:38 has no hits.

BS14070.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:25 Download gff for BS14070.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31732-PC 1..579 17..595 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:41:26 Download gff for BS14070.5prime
Subject Subject Range Query Range Percent Splice Strand
yuri-RC 566..1145 16..595 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:01:42 Download gff for BS14070.5prime
Subject Subject Range Query Range Percent Splice Strand
yuri-RC 566..1145 16..595 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:01:42 Download gff for BS14070.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15263443..15263664 374..595 99 <- Minus
2L 15263770..15264127 16..373 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:41:26 Download gff for BS14070.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15263443..15263664 374..595 99 <- Minus
arm_2L 15263770..15264127 16..373 100   Minus

BS14070.pep Sequence

Translation from 16 to 1752

> BS14070.pep
MASRQAGFVLDAKSMGLNPSRPASSPPPPPSSASQMCRQVQPTGTSASHP
HQESTLKASSPDRCTASTEAMSTEHYRCLIQKLRDTNGDAGDMSFELNSI
FLKRLDEIDCLDEHEGDDMHTCQLRLVTFQEWVDFLLHVNSVILGNVSDL
EKEAYSKIVACCQSVQVRQQHTLEENRRLREDICAIIERVQHSPHCTDFD
FNGISLETLTVNQLRGVGKDPAHAECESEKMSESMKSLVGEIAAKHDEIG
ELKSQINALDEVVHTARQKLLLKDQCIAQLNQQLHEITRCIESRDQAKME
ESPNDTLTADAITSDMLENLSIHDTQESEMLRLLNAELNDLLDLHNKQEF
QTIEIRRKRVSCFIEKLVSEREDTLKKLESIRSHLTILQSDLDQSCLISV
DPESGPCDLDADAQMLEALRRRLLNLSQLNRELHGKYQRLDTESKIKISE
LEARIESESSVLQRNSDVLREIAELICSLGSKEFSYNEIYDESSKENPFC
TTIADMFARKFEQEQNQVEIECDTKTPSQTRKPTKTTKIPGATAKTNKQQ
PTPKPSNKPTTTKTIPTKNTTTTFRTSK*

BS14070.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:06:37
Subject Length Description Subject Range Query Range Score Percent Strand
yuri-PC 578 CG31732-PC 1..578 1..578 2966 100 Plus
yuri-PD 564 CG31732-PD 1..564 15..578 2900 100 Plus
yuri-PQ 981 CG31732-PQ 1..520 1..520 2657 100 Plus
yuri-PB 890 CG31732-PB 1..520 1..520 2657 100 Plus
yuri-PI 260 CG31732-PI 1..239 1..241 1217 96.7 Plus