Clone Sequence Records
BS14081.5prime Sequence
591 bp (488 high quality bases) assembled on 2006-10-13
> BS14081.5prime
GAAGTTATCAGTCGACATGGAAATGGCCAACAACATGGTCAGCAGCAGCA
ACAGTGGCGGCGGTGGCAGCAGCAACACCACCTCCTACGGCAACAACAGC
TACAACAACAGTGCGGTGGACAGTGGTCACAGTTCGCACAGTGGTGTCGG
TAGCGGGGGCGGTGGTGAGGGAACGGGAGCGCGCCTCCGGGATGTTTGTA
CCATCCTGAACACTGGCCCCGCCGCCTATCAAAATCAAACAGGTGGCTAT
GCCTACGACCACATCATCGCCCTGATGAGGAACCTTGATCTGCAGGACGA
TGGCATTGTGCTGAACTCCAAGATCAAGACCATCGAAACGGACTTCTGCA
ACATAGTGCGCGACGAGTCTATGCTTTGTGAGTCAATGGAGTACCTGAAC
GACAAGGCGCTTAGCGATGGTGATACGGCGCTAAAGTTCGCCCTGCTCTT
CTCATCGAGAAATTTCGACGCACTGGCCATGAAAGAGACGAAAGTGCGCA
GCGCCATGCTCAAGATTTTGGAGACAAACTTCCTCAACGCGGACGCATAT
CGGTTGCACGACAAGAACCGACTGTACAACTCGATCACGCT
BS14081.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:27:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5726-PA | 2301 | CG5726-RA | 1..575 | 17..591 | 2850 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5726-RA | 3491 | CG5726-RA | 366..940 | 17..591 | 2860 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:25:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18179471..18179832 | 378..17 | 1810 | 100 | Minus |
| 2R | 25286936 | 2R | 18178321..18178534 | 591..378 | 1055 | 99.5 | Minus |
Blast to na_te.dros performed 2015-02-13 16:25:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2343..2422 | 28..110 | 192 | 72.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6802 | 27..111 | 184 | 70.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6764..6843 | 28..110 | 183 | 71.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2445..2527 | 28..110 | 181 | 68.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6825 | 28..110 | 181 | 68.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1079..1162 | 28..111 | 177 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1508..1586 | 31..111 | 175 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6818..6900 | 28..110 | 172 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6836..6932 | 28..121 | 172 | 66 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6785..6868 | 28..114 | 167 | 67.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6877 | 28..111 | 161 | 67.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1071..1152 | 29..110 | 158 | 65.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2370..2452 | 28..110 | 154 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2390 | 28..111 | 152 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2469..2546 | 28..102 | 149 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2397..2480 | 28..111 | 141 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2369 | 48..111 | 140 | 68.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6769 | 66..111 | 140 | 78.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6781 | 66..111 | 140 | 78.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1605 | 28..108 | 137 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2596..2662 | 41..110 | 136 | 68.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2576..2666 | 8..96 | 135 | 62.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2811..2889 | 28..109 | 133 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2769..2852 | 28..111 | 132 | 61.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1165 | 28..93 | 132 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2593..2639 | 65..111 | 127 | 74.5 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 970..1033 | 44..109 | 127 | 68.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2409..2494 | 28..110 | 126 | 62.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1533..1587 | 16..70 | 122 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2472..2571 | 13..113 | 115 | 59.8 | Plus |
| TART-A | 13424 | TART-A 13424bp | 11094..11126 | 42..74 | 111 | 81.8 | Plus |
BS14081.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:33 Download gff for
BS14081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-PA | 1..575 | 17..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:51:20 Download gff for
BS14081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-RA | 363..940 | 14..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:55:52 Download gff for
BS14081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-RA | 363..940 | 14..591 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:55:52 Download gff for
BS14081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18178321..18178533 | 379..591 | 99 | <- | Minus |
| 2R | 18179471..18179835 | 14..378 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:51:20 Download gff for
BS14081.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14065826..14066038 | 379..591 | 99 | <- | Minus |
| arm_2R | 14066976..14067340 | 14..378 | 99 | | Minus |
BS14081.3prime Sequence
567 bp (512 high quality bases) assembled on 2006-10-13
> BS14081.3prime
ATGGTCTAGAAAGCTTTCATTTCTGGGCCGACAAATAGTTCATGTACTGA
GTGGTCTGCTGGGCATTCCGCACCAGCTCGCTTTCCTCCTTTCCGGATGG
TGGTTGGCCCTTATCCGCCTGCCCCTGCCAGTTCTCCTCGTTCTGCGGCT
GATGGATGTCTGGCTGGGAGCGGCGTGTGAAATGGCGGTGCCGCTGGTGC
TGATGCTGATGTGGATTTTGTGGCGATGTCTGTTGGCGACGATCAAACGA
GCTGGACGCTTCGCTGGCCAAACTGCTTTGGCTGCTGTAACGCGGGAATC
GAGGACCACCGCCTGCATGCGTGGGGCTCTGATTGTACCTATAGCCGCCT
GATTTATCCATTTGCGATTTTGGCGGTCTCGGCAGAGTGCGAGCCCTGGA
TGAGCTGCGACTATTCGATTCCGGACCATTCGAGTTGTACGCACAGTTCT
CGTCTTGGTAGCCACTGTTTATAGCATTGTTTGAGCGTCGCCAGGAATCG
CTGTGTATTTTATGGTTGCCTCCCTGATGTTGCTGTTGCATCTGCTGTTG
TTGTTGCTGCTGTTGTT
BS14081.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:26:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5726-PA | 2301 | CG5726-RA | 1751..2301 | 567..17 | 2755 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:56:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5726-RA | 3491 | CG5726-RA | 2116..2666 | 567..17 | 2755 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:56:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18176080..18176630 | 17..567 | 2755 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 11:56:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7953..7989 | 222..186 | 113 | 78.4 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9397..9433 | 222..186 | 113 | 78.4 | Minus |
BS14081.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:33 Download gff for
BS14081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-PA | 1751..2301 | 17..567 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:41:28 Download gff for
BS14081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-RA | 2116..2676 | 4..567 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:02:22 Download gff for
BS14081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-RA | 2116..2676 | 4..567 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:02:22 Download gff for
BS14081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18176070..18176630 | 4..567 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:41:28 Download gff for
BS14081.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14063575..14064135 | 4..567 | 99 | | Plus |
BS14081.complete Sequence
2333 bp assembled on 2008-08-15
GenBank Submission: KX801696
> BS14081.complete
GAAGTTATCAGTCGACATGGAAATGGCCAACAACATGGTCAGCAGCAGCA
ACAGTGGCGGCGGTGGCAGCAGCAACACCACCTCCTACGGCAACAACAGC
TACAACAACAGTGCGGTGGACAGTGGTCACAGTTCGCACAGTGGTGTCGG
TAGCGGGGGCGGTGGTGAGGGAACGGGAGCGCGCCTCCGGGATGTTTGTA
CCATCCTGAACACTGGCCCCGCCGCCTATCAAAATCAAACAGGTGGCTAT
GCCTACGACCACATCATCGCCCTGATGAGGAACCTTGATCTGCAGGACGA
TGGCATTGTGCTGAACTCCAAGATCAAGACCATCGAAACGGACTTCTGCA
ACATAGTGCGCGACGAGTCTATGCTTTGTGAGTCAATGGAGTACCTGAAC
GACAAGGCGCTTAGCGATGGTGATACGGCGCTAAAGTTCGCCCTGCTCTT
CTCATCGAGAAATTTCGACGCACTGGCCATGAAAGAGACGAAGGTGCGCA
GCGCCATGCTCAAGATTTTGGAGACAAACTTCCTCAACGCGGACGCATAT
CGGTTGCACGACAAGAACCGACTGTACAACTCGATCACGCTGCTGGGTGA
ATATTATCACAGGGTAAGGCTGGCGGATAATACCCCGATCACCATTTTGG
GTGAGTCCCTGCTGGACTTGCTTACCCGCGAGCTCAATGACACGTCGGTG
GTGCTGGGCACTCGGATTGCCCGCCTGGTGCTGTCACAGATCACACTGAA
TGGGGAGATCATGCGCAAGCGGCATAAGGTCGAGATTGATTTACTGCTCT
TCCACGTTCGCCGGCATTTGATCATGCAGCCCGCGCTGACCGCTAAGGTG
AAGGCCATGCTACTGATGGTGCTGGACCTCTTTTACAGCCACTTTAAGCA
TATCGGCCACGACCTGGAGACAATGTACACCAACTTCTTGGTGGTGGAAG
ATGGCGAAGAGGATGGGGTCAACAATAATGGCTCCGGCCCCCAGGATCTC
GCCGAAGATGGCCGCTCACAGCAGCTTCAGCATCAACAGTCAGAGAACGG
CAGCAGCGCCAACACGTCCGGCCAGGATCAGGATACCTTTGAACCGCGGC
CGTCGGCAAAGAAGTGGAGCGAGCAGGTGTGCGAGGATTCCTTTTGTGAA
ACTGGCTACGGTGAGGCGGATCAGGGCGACGATAGATACTCCGAATCTGG
ACTCTCGTATCAAGCGAATAACTCTGCTTCACTCGGCCACCGTCGTCGCG
GATTCCAACCTCGGCAAGTGCCGCGTCCTTTGAAGTCACATCAATCACAA
CAGCAGCAGCACCAACAACCAGCCAGCATAGACGCCAGCTCCGACCAGTA
TCCATCCATGGCCAGCAGCGAGGATCGGGACGAGAGCAAGCCGCTCCCTA
GCTGGCGGAAGACACGCTTCAACCGCAATCACGACGGCGACCAGAGTAAC
GGACGGTCGCGCGACCAACAGCGGCGGTACAGCGTGAGCTGCGACGATGA
CCACCACAGCGTGCGCAGCGAGGGAGGCGGCAACCTGCGACTGTATAGCA
TCCACGACAGGAGGAAGCACTCGCAGGAGCGCATCGAACGCAATATGTCT
GGCGGTGGCAACTATAATAGTATAGTCAACTCGAATTGGGATCAAAGGGA
TCGCGATGATCGCAGTGAGCGCTCTTATATCAGTAACTACGAGCGCGGAA
ACAACTATAAGCGAGGTGGGCGATTCAATAACCGCAACACCTACGACAAA
CCGCCGCGATTCCAGAAACAACAGCAGCAACAACAACAGCAGATGCAACA
GCAACATCAGGGAGGCAACCATAAAATACACAGCGATTCCTGGCGACGCT
CAAACAATGCTATAAACAGTGGCTACCAAGACGAGAACTGTGCGTACAAC
TCGAATGGTCCGGAATCGAATAGTCGCAGCTCATCCAGGGCTCGCACTCT
GCCGAGACCGCCAAAATCGCAAATGGATAAATCAGGCGGCTATAGGTACA
ATCAGAGCCCCACGCATGCAGGCGGTGGTCCTCGATTCCCGCGTTACAGC
AGCCAAAGCAGTTTGGCCAGCGAAGCGTCCAGCTCGTTTGATCGTCGCCA
ACAGACATCGCCACAAAATCCACATCAGCATCAGCACCAGCGGCACCGCC
ATTTCACACGCCGCTCCCAGCCAGACATCCATCAGCCGCAGAACGAGGAG
AACTGGCAGGGGCAGGCGGATAAGGGCCAACCACCATCCGGAAAGGAGGA
AAGCGAGCTGGTGCGGAATGCCCAGCAGACCACTCAGTACATGAACTATT
TGTCGGCCCAGAAATGAAAGCTTTCTAGACCAT
BS14081.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:30:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5726-RA | 2301 | CG5726-PA | 1..2301 | 17..2317 | 11505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:30:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5726-RA | 3491 | CG5726-RA | 366..2666 | 17..2317 | 11505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:30:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18176080..18177064 | 2317..1333 | 4925 | 100 | Minus |
| 2R | 25286936 | 2R | 18177580..18178534 | 1332..378 | 4775 | 100 | Minus |
| 2R | 25286936 | 2R | 18179471..18179832 | 378..17 | 1810 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 07:30:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2875 | 1289..1838 | 239 | 55.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2343..2422 | 28..110 | 192 | 72.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6802 | 27..111 | 184 | 70.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6764..6843 | 28..110 | 183 | 71.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2445..2527 | 28..110 | 181 | 68.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6825 | 28..110 | 181 | 68.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1079..1162 | 28..111 | 177 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1508..1586 | 31..111 | 175 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6818..6900 | 28..110 | 172 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6836..6932 | 28..121 | 172 | 66 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6785..6868 | 28..114 | 167 | 67.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6877 | 28..111 | 161 | 67.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1071..1152 | 29..110 | 158 | 65.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2370..2452 | 28..110 | 154 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2390 | 28..111 | 152 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2469..2546 | 28..102 | 149 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6764..6892 | 1256..1389 | 143 | 61.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2397..2480 | 28..111 | 141 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2369 | 48..111 | 140 | 68.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6769 | 66..111 | 140 | 78.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6781 | 66..111 | 140 | 78.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1605 | 28..108 | 137 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2988 | 1289..1834 | 136 | 53.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2596..2662 | 41..110 | 136 | 68.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2576..2666 | 8..96 | 135 | 62.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2811..2889 | 28..109 | 133 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2769..2852 | 28..111 | 132 | 61.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1165 | 28..93 | 132 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2593..2639 | 65..111 | 127 | 74.5 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 970..1033 | 44..109 | 127 | 68.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2409..2494 | 28..110 | 126 | 62.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1533..1587 | 16..70 | 122 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6821 | 1256..1345 | 119 | 62 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2396..2450 | 1288..1347 | 118 | 70 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2472..2571 | 13..113 | 115 | 59.8 | Plus |
BS14081.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:42:30 Download gff for
BS14081.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-RA | 335..2648 | 14..2330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:49 Download gff for
BS14081.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-RA | 366..2665 | 17..2316 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:23:14 Download gff for
BS14081.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-RA | 338..2637 | 17..2316 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:08 Download gff for
BS14081.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5726-RA | 366..2665 | 17..2316 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:08 Download gff for
BS14081.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18176081..18177064 | 1333..2316 | 100 | <- | Minus |
| 2R | 18177580..18178533 | 379..1332 | 100 | <- | Minus |
| 2R | 18179471..18179832 | 17..378 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:49 Download gff for
BS14081.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14063586..14064569 | 1333..2316 | 100 | <- | Minus |
| arm_2R | 14065085..14066038 | 379..1332 | 100 | <- | Minus |
| arm_2R | 14066976..14067337 | 17..378 | 100 | | Minus |
BS14081.pep Sequence
Translation from 16 to 2316
> BS14081.pep
MEMANNMVSSSNSGGGGSSNTTSYGNNSYNNSAVDSGHSSHSGVGSGGGG
EGTGARLRDVCTILNTGPAAYQNQTGGYAYDHIIALMRNLDLQDDGIVLN
SKIKTIETDFCNIVRDESMLCESMEYLNDKALSDGDTALKFALLFSSRNF
DALAMKETKVRSAMLKILETNFLNADAYRLHDKNRLYNSITLLGEYYHRV
RLADNTPITILGESLLDLLTRELNDTSVVLGTRIARLVLSQITLNGEIMR
KRHKVEIDLLLFHVRRHLIMQPALTAKVKAMLLMVLDLFYSHFKHIGHDL
ETMYTNFLVVEDGEEDGVNNNGSGPQDLAEDGRSQQLQHQQSENGSSANT
SGQDQDTFEPRPSAKKWSEQVCEDSFCETGYGEADQGDDRYSESGLSYQA
NNSASLGHRRRGFQPRQVPRPLKSHQSQQQQHQQPASIDASSDQYPSMAS
SEDRDESKPLPSWRKTRFNRNHDGDQSNGRSRDQQRRYSVSCDDDHHSVR
SEGGGNLRLYSIHDRRKHSQERIERNMSGGGNYNSIVNSNWDQRDRDDRS
ERSYISNYERGNNYKRGGRFNNRNTYDKPPRFQKQQQQQQQQMQQQHQGG
NHKIHSDSWRRSNNAINSGYQDENCAYNSNGPESNSRSSSRARTLPRPPK
SQMDKSGGYRYNQSPTHAGGGPRFPRYSSQSSLASEASSSFDRRQQTSPQ
NPHQHQHQRHRHFTRRSQPDIHQPQNEENWQGQADKGQPPSGKEESELVR
NAQQTTQYMNYLSAQK*
BS14081.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:34:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5726-PA | 766 | CG5726-PA | 1..766 | 1..766 | 4052 | 100 | Plus |
