Clone Sequence Records
BS14083.complete Sequence
1655 bp assembled on 2009-12-07
GenBank Submission: KX801121
> BS14083.complete
GAAGTTATCAGTCGACATGTCGTTTTTTCGCAATATACGCTCCTCCCTCT
CCTCGTCGTCGCGGGCCAAAAGCTCCCGCTCCTCATCCCGCGATACGACA
CCGGTACGCTCCGGATCTCGTCCAGGCAGCGTGATCAGCGGCGTGGGATC
CGTGGGAGTTACCAGTCGCCGGGACTCGACTACGAGCTCAACTTTGCAGC
GCGGTGATACCTTTATAATGCCCAATTCGGAAGAGGAGGCGCCACCTTCG
TCGAACACCTCCACTCTGGAGAAAAAGTCGAAGAAGTCCAAGGTCTTTAG
CAAATTCAGCACCTTCACCAAGCGCAAGAAGACTCCGTCGCCCGAGGAAG
TGGCCAGCTATGAGCATCATCCCAGTGACACGGCCACGAATACGTACTAC
AAGTGGCGCAGCGATGGAGCGGACCGTCTGCAGGACTACGATGCCCAGTC
GGATCCGTTTAACTTCCTTTACGAGCAGCACTCCAATCTGAGGGCCCTGC
AAACGGGTGATTCCAGTGGTATCCACCGGCAGGCCAGCATTGGTTCCACT
TCCAGTGGCAGCTTTGATTCATCCACCTACCGTAAGAGCAAAACTCCCAC
GCATTTGCGAGAGCAGCTGGAGCAGCTTAAAACCCACTCCAACGACGATC
TGCTGGAGGATCAGCAGCGGGAGGAGGATGAGCGTGAGAAGTACAAGACA
GTCACCCTAAATAGCTTTAGGAAGTCCTTCAGGGACCGCTTGCTGCAGCA
GCAGAAGGAAACGCCCCACAATCCCGCCTGGTTTGTGGAAGTTCCCGGCC
AGCCAACAACCACGAAACCTCTGGAACGTCGCGAGTCCAAGGAGAACCGT
CCCGATTTCCTGGTCTTCGACAATGATAACTACCGCCCTCAGTCGCGTTC
TCCACTCCGGGATCGTCCCTCTCGTTCCGCCACCCGTTCTCCGGTGAAAC
GCAACGAAACTTTCCGGGTCACGCAACCCTCAGTGCGTCATATGTCGCCA
TCGCCGACACCCACACCTGCTCCCTCCATTCGCATCGAGATCAAGAACTC
CATATCACCGCATTCTCCGGGCAGATTTGTGCCCGTGGGCGTGGCCAAGC
CCATGCCCACCACGGAGTACTATGCGCAAAGACTGCTCGCGAATAGAACC
AGCATGAGCCCCAGTCCAAGTCAAAACCAGGGCTCTCGATGGTACCGCCA
GCAGAACTCACCCACCCGGTTGAGTGTGGGTCACCAGCAGCAGCAGCACC
AGCACCAGCCCAGCCACCTCAGCCAGCAGCAAAAGGGAGGACGAACCCTG
GTGCACATTGTATCCGACCAGAGTAAGACCATGACGCCACCAACCCGAGG
CAGGGCGCCAACAAGAATCCAGCTGTATGACAATAAACCACAGAGTAGAC
CACAGGCAACGACCTACTTTGGCGGCCACTACAATGCACCTGTTAAGCCC
GGCCCGCGATCAGCATCCACTGGTGGACCCACCGTTTATCTGGGGCGTCG
CGAACCACCAATGACACGTGCCACCACCACCACCAACGCCACCACCAGCA
ACAGAAGCATCGCCAACAGCACCACCGCCCACATGGCCGCCCCCGTGCCA
CGACGCAACCGTTCGCCGATCAAAATGCCCTGGCGGTAGAAGCTTTCTAG
ACCAT
BS14083.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:58:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32170-RA | 1623 | CG32170-PA | 1..1623 | 17..1639 | 8115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:58:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32170-RA | 2064 | CG32170-RA | 151..1773 | 17..1639 | 8115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16877459..16879081 | 17..1639 | 8115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:58:28 has no hits.
BS14083.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:43:49 Download gff for
BS14083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-RA | 141..1763 | 17..1639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:02:37 Download gff for
BS14083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-RA | 151..1773 | 17..1639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:10:20 Download gff for
BS14083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-RA | 141..1763 | 17..1639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:01 Download gff for
BS14083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-RA | 151..1773 | 17..1639 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:01 Download gff for
BS14083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16877459..16879081 | 17..1639 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:02:37 Download gff for
BS14083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16870559..16872181 | 17..1639 | 100 | | Plus |
BS14083.3prime Sequence
628 bp (627 high quality bases) assembled on 2006-10-13
> BS14083.3prime
ATGGTCTAGAAAGCTTCTACCGCCAGGGCATTTTGATCGGCGAACGGTTG
CGTCGTGGCACGGGGGCGGCCATGTGGGCGGTGGTGCTGTTGGCGATGCT
TCTGTTGCTGGTGGTGGCGTTGGTGGTGGTGGTGGCACGTGTCATTGGTG
GTTCGCGACGCCCCAGATAAACGGTGGGTCCACCAGTGGATGCTGATCGC
GGGCCGGGCTTAACAGGTGCATTGTAGTGGCCGCCAAAGTAGGTCGTTGC
CTGTGGTCTACTCTGTGGTTTATTGTCATACAGCTGGATTCTTGTTGGCG
CCCTGCCTCGGGTTGGTGGCGTCATGGTCTTACTCTGGTCGGATACAATG
TGCACCAGGGTTCGTCCTCCCTTTTGCTGCTGGCTGAGGTGGCTGGGCTG
GTGCTGGTGCTGCTGCTGCTGGTGACCCACACTCAACCGGGTGGGTGAGT
TCTGCTGGCGGTACCATCGAGAGCCCTGGTTTTGACTTGGACTGGGGCTC
ATGCTGGTTCTATTCGCGAGCAGTCTTTGCGCATAGTACTCCGTGGTGGG
CATGGGCTTGGCCACGCCCACGGGCACAAATCTGCCCGGAGAATGCGGTG
ATATGGAGTTCTTGATCTCGATGCGAAT
BS14083.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:27:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32170-PA | 1623 | CG32170-RA | 1012..1623 | 628..17 | 3060 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32170-RA | 2064 | CG32170-RA | 1162..1773 | 628..17 | 3060 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:04:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16878470..16879081 | 628..17 | 3060 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:04:49 has no hits.
BS14083.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:34 Download gff for
BS14083.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-PA | 1012..1623 | 17..628 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:42:02 Download gff for
BS14083.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-RA | 1162..1778 | 10..628 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:18:54 Download gff for
BS14083.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-RA | 1162..1778 | 10..628 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:18:54 Download gff for
BS14083.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16878470..16879086 | 10..628 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:42:02 Download gff for
BS14083.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16871570..16872186 | 10..628 | 99 | | Minus |
BS14083.5prime Sequence
726 bp (586 high quality bases) assembled on 2006-10-13
> BS14083.5prime
GAAGTTATCAGTCGACATGTCGTTTTTTCGCAATATACGCTCCTCCCTCT
CCTCGTCGTCGCGGGCCAAAAGCTCCCGCTCCTCATCCCGCGATACGACA
CCGGTACGCTCCGGATCTCGTCCAGGCAGCGTGATCAGCGGCGTGGGATC
CGTGGGAGTTACCAGTCGCCGGGACTCGACTACGAGCTCAACTTTGCAGC
GCGGTGATACCTTTATAATGCCCAATTCGGAAGAGGAGGCGCCACCTTCG
TCGAACACCTCCACTCTGGAGAAAAAGTCGAAGAAGTCCAAGGTCTTTAG
CAAATTCAGCACCTTCACCAAGCGCAAGAAGACTCCGTCGCCCGAGGAAG
TGGCCAGCTATGAGCATCATCCCAGTGACACGGCCACGAATACGTACTAC
AAGTGGCGCAGCGATGGAGCGGACCGTCTGCAGGACTACGATGCCCAGTC
GGATCCGTTTAACTTCCTTTACGAGCAGCACTCCAATCTGAGGGCCCTGC
AAACGGGTGATTCCAGTGGTATCCACCGGCAGGCCAGCATTGGTTCCACT
TCCAGTGGCAGCTTTGATTCATCCACCTACCGTAAGAGCAAAACTCCCAC
GCATTTGCGAGAGCAGCTGGAGCAGCTTAAAACCCACTCCAACGACGATC
TGCTGGAGGATCAGCAGCGGGAGGAGGATGAGCGTGAGAAGTACAAGACA
GTCACCCTAAATAGCTTTAGGAAGTC
BS14083.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32170-PA | 1623 | CG32170-RA | 1..710 | 17..726 | 3550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:26:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32170-RA | 2064 | CG32170-RA | 151..860 | 17..726 | 3550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16877459..16878168 | 17..726 | 3550 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:26:01 has no hits.
BS14083.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:47:35 Download gff for
BS14083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-PA | 1..710 | 17..726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:51:24 Download gff for
BS14083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-RA | 143..860 | 7..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:56:10 Download gff for
BS14083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32170-RA | 143..860 | 7..726 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:56:10 Download gff for
BS14083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16877451..16878168 | 7..726 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:51:24 Download gff for
BS14083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16870551..16871268 | 7..726 | 99 | | Plus |
BS14083.pep Sequence
Translation from 16 to 1638
> BS14083.pep
MSFFRNIRSSLSSSSRAKSSRSSSRDTTPVRSGSRPGSVISGVGSVGVTS
RRDSTTSSTLQRGDTFIMPNSEEEAPPSSNTSTLEKKSKKSKVFSKFSTF
TKRKKTPSPEEVASYEHHPSDTATNTYYKWRSDGADRLQDYDAQSDPFNF
LYEQHSNLRALQTGDSSGIHRQASIGSTSSGSFDSSTYRKSKTPTHLREQ
LEQLKTHSNDDLLEDQQREEDEREKYKTVTLNSFRKSFRDRLLQQQKETP
HNPAWFVEVPGQPTTTKPLERRESKENRPDFLVFDNDNYRPQSRSPLRDR
PSRSATRSPVKRNETFRVTQPSVRHMSPSPTPTPAPSIRIEIKNSISPHS
PGRFVPVGVAKPMPTTEYYAQRLLANRTSMSPSPSQNQGSRWYRQQNSPT
RLSVGHQQQQHQHQPSHLSQQQKGGRTLVHIVSDQSKTMTPPTRGRAPTR
IQLYDNKPQSRPQATTYFGGHYNAPVKPGPRSASTGGPTVYLGRREPPMT
RATTTTNATTSNRSIANSTTAHMAAPVPRRNRSPIKMPWR*
BS14083.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:05:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32170-PA | 540 | CG32170-PA | 1..540 | 1..540 | 2825 | 100 | Plus |
