Clone BS14132 Report

Search the DGRC for BS14132

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:141
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptPrx2540-2-RA
Protein status:BS14132.pep: full length peptide match
Sequenced Size:695

Clone Sequence Records

BS14132.complete Sequence

695 bp assembled on 2010-02-09

GenBank Submission: KX801707

> BS14132.complete
GAAGTTATCAGTCGACATGCGTTTGGGACAGACCGTACCTAACTTCGAGG
CCGACACAACCAAGGGGCCCATTAAATTCCACGAGTGGCAGGGCAACTCC
TGGGTGGTGCTCTTCTCTCACCCCGCCGACTTTACTCCCGTCTGCACCAC
TGAGCTGGGCAGGATTGCGGTGCACCAGCCGGAGTTTGCCAAGCGGAACA
CCAAGTGCCTGGCACATTCCGTTGACGCATTGAACTCGCACGTGGACTGG
GTGAACGACATCAAGAGCTATTGCCTGGACATTCCCGGGGACTTCCCCTA
CCCGATCATCGCCGACCCTACTCGCGACCTGGCCGTCAGCCTGGGCATGC
TCGACGAGGAGCAGAAGAAGGATCCCGAGGTGGGCAAGACCATCCGCGCC
CTGTTCATCATCAGTCCGGACCATAAGGTGCGCCTCTCCATGTTCTACCC
CATGTCCACTGGTCGCAACGTTGACGAGATTCTGAGGACCATTGACTCCC
TCCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCCGCCAACTGGACC
CCTGGCACTAAGGTCATGATCCTGCCCACTGTCACCGATGAAGAGGCTCA
TAAACTCTTCCCCAAGGGATTTGATAAGGTATCCATGCCGTCTGGAGTAA
ACTACGTCCGCACCACTGACAACTACTGAAAGCTTTCTAGACCAT

BS14132.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
Prx2540-2-RA 663 CG11765-PA 1..663 17..679 3315 100 Plus
Prx2540-1-RA 663 CG12405-PA 1..659 17..675 3160 98.6 Plus
CG12896-RA 663 CG12896-PA 1..659 17..675 3115 98.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
Prx2540-2-RA 856 CG11765-RA 88..750 17..679 3315 100 Plus
Prx2540-1-RA 848 CG12405-RA 97..755 17..675 3160 98.6 Plus
CG12896-RA 848 CG12896-RA 97..755 17..675 3115 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10418950..10419324 100..474 1875 100 Plus
2R 25286936 2R 10424677..10425051 100..474 1800 98.7 Plus
2R 25286936 2R 10427300..10427674 474..100 1800 98.7 Minus
2R 25286936 2R 10419527..10419655 551..679 645 100 Plus
2R 25286936 2R 10425254..10425378 551..675 580 97.6 Plus
2R 25286936 2R 10426973..10427097 675..551 535 95.2 Minus
2R 25286936 2R 10418805..10418887 17..99 415 100 Plus
2R 25286936 2R 10424532..10424614 17..99 415 100 Plus
2R 25286936 2R 10427737..10427819 99..17 415 100 Minus
2R 25286936 2R 10419388..10419463 475..550 380 100 Plus
2R 25286936 2R 10425115..10425190 475..550 365 98.7 Plus
2R 25286936 2R 10427161..10427236 550..475 365 98.7 Minus
Blast to na_te.dros performed on 2014-11-28 04:23:25 has no hits.

BS14132.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:08 Download gff for BS14132.complete
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 1..663 17..679 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:45 Download gff for BS14132.complete
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 88..749 17..678 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:17 Download gff for BS14132.complete
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 88..749 17..678 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:36:49 Download gff for BS14132.complete
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 88..749 17..678 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:27 Download gff for BS14132.complete
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 88..749 17..678 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:27 Download gff for BS14132.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10419527..10419654 551..678 100   Plus
2R 10418805..10418887 17..99 100 -> Plus
2R 10418950..10419324 100..474 100 -> Plus
2R 10419388..10419463 475..550 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:17 Download gff for BS14132.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6306310..6306392 17..99 100 -> Plus
arm_2R 6306455..6306829 100..474 100 -> Plus
arm_2R 6306893..6306968 475..550 100 -> Plus
arm_2R 6307032..6307159 551..678 100   Plus

BS14132.3prime Sequence

657 bp (550 high quality bases) assembled on 2006-10-13

> BS14132.3prime
ATGGTCTAGAAAGCTTTCAGTAGTTGTCAGTGGTGCGGACGTAGTTTACT
CCAGACGGCATGGATACCTTATCAAATCCCTTGGGGAAGAGTTTATGAGC
CTCTTCATCGGTGACAGTGGGCAGGATCATGACCTTAGTGCCAGGGGTCC
AGTTGGCGGGAGTGGCCACCACCTTGAGGCGATCAGTCAGCTGGAGGGAG
TCAATGGTCCTCAGAATCTCGTCAACGTTGCGACCAGTGGACATGGGGTA
GAACATGGAGAGGCGCACCTTATGGTCCGGACTGATGATGAACAGGGCGC
GGATGGTCTTGCCCACCTCGGGATCCTTCTTCTGCTCCTCGTCGAGCATG
CCCAGGCTGACGGCCAGGTCGCGAGTAGGGTCGGCGATGATCGGGTAGGG
GAAGTCCCCGGGAATGTCCAGGCAATAGCTCTTGATGTCGTTCACCCAGT
CCACGTGCGAGTTCAATGCGTCAACGGAATGTGCCAGGCACTTGGTGTTC
CGCTTGGCAAACTCCGGCTGGTGCACCGCAATCCTGCCCAGCTCAGTGGT
GCAAACGGGAGTAAAGTCGGCGGGGTGAGAGAAGAGCACCACCCAGGAGT
TGCCTTGCCACTCGTGGAATTTAATGGGCCCCTTGGTTGTGTCGGCCTCG
AAGTTAG

BS14132.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:35:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG11765-PA 663 Prx2540-2-RA 23..663 657..17 3155 99.6 Minus
CG12405-PA 663 Prx2540-1-RA 23..659 657..21 2910 98.2 Minus
CG12896-PA 663 CG12896-RA 23..659 657..21 2835 97.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:38:49
Subject Length Description Subject Range Query Range Score Percent Strand
Prx2540-2-RA 856 CG11765-RA 110..750 657..17 3175 99.7 Minus
Prx2540-1-RA 848 CG12405-RA 119..755 657..21 3020 98.3 Minus
CG12896-RA 848 CG12896-RA 119..755 657..21 2975 97.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:38:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10418950..10419324 596..222 1860 99.7 Minus
2R 25286936 2R 10424677..10425051 596..222 1785 98.4 Minus
2R 25286936 2R 10427300..10427674 222..596 1785 98.4 Plus
2R 25286936 2R 10419527..10419655 145..17 645 100 Minus
2R 25286936 2R 10425254..10425378 145..21 580 97.6 Minus
2R 25286936 2R 10426973..10427097 21..145 535 95.2 Plus
2R 25286936 2R 10419388..10419463 221..146 380 100 Minus
2R 25286936 2R 10425115..10425190 221..146 365 98.7 Minus
2R 25286936 2R 10427161..10427236 146..221 365 98.7 Plus
2R 25286936 2R 10418827..10418887 657..597 290 98.4 Minus
2R 25286936 2R 10424554..10424614 657..597 290 98.4 Minus
2R 25286936 2R 10427737..10427797 597..657 290 98.4 Plus
Blast to na_te.dros performed on 2015-02-12 04:38:47 has no hits.

BS14132.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:48:09 Download gff for BS14132.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11765-PA 23..663 17..657 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:17:00 Download gff for BS14132.3prime
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 110..750 17..657 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:26:00 Download gff for BS14132.3prime
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 110..750 17..657 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:26:00 Download gff for BS14132.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 10418827..10418887 597..657 98 -> Minus
2R 10418950..10419324 222..596 99 -> Minus
2R 10419388..10419463 146..221 100 -> Minus
2R 10419527..10419655 17..145 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:17:00 Download gff for BS14132.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6306455..6306829 222..596 99 -> Minus
arm_2R 6306893..6306968 146..221 100 -> Minus
arm_2R 6307032..6307160 17..145 100   Minus
arm_2R 6306332..6306392 597..657 98 -> Minus

BS14132.5prime Sequence

693 bp (645 high quality bases) assembled on 2006-10-13

> BS14132.5prime
GAAGTTATCAGTCGACATGCGTTTGGGACAGACCGTACCTAACTTCGAGG
CCGACACAACCAAGGGGCCCATTAAATTCCACGAGTGGCAGGGCAACTCC
TGGGTGGTGCTCTTCTCTCACCCCGCCGACTTTACTCCCGTCTGCACCAC
TGAGCTGGGCAGGATTGCGGTGCACCAGCCGGAGTTTGCCAAGCGGAACA
CCAAGTGCCTGGCACATTCCGTTGACGCATTGAACTCGCACGTGGACTGG
GTGAACGACATCAAGAGCTATTGCCTGGACATTCCCGGGGACTTCCCCTA
CCCGATCATCGCCGACCCTACTCGCGACCTGGCCGTCAGCCTGGGCATGC
TCGACGAGGAGCAGAAGAAGGATCCCGAGGTGGGCAAGACCATCCGCGCC
CTGTTCATCATCAGTCCGGACCATAAGGTGCGCCTCTCCATGTTCTACCC
CATGTCCACTGGTCGCAACGTTGACGAGATTCTGAGGACCATTGACTCCC
TCCAGCTGACTGATCGCCTCAAGGTGGTGGCCACTCCCGCCAACTGGACC
CCTGGCACTAAGGTCATGATCCTGCCCACTGTCACCGATGAAGAGGCTCA
TAAACTCTTCCCCAAGGGATTTGATAAGGTATCCATGCCGTCTGGAGTAA
ACTACGTCCGCACCACTGACAACTACTGAAAGCTTTCTAGACC

BS14132.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:35:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11765-PA 663 Prx2540-2-RA 1..663 17..679 3315 100 Plus
CG12405-PA 663 Prx2540-1-RA 1..659 17..675 3070 98.6 Plus
CG12896-PA 663 CG12896-RA 1..659 17..675 2995 98.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:26:56
Subject Length Description Subject Range Query Range Score Percent Strand
Prx2540-2-RA 856 CG11765-RA 88..750 17..679 3315 100 Plus
Prx2540-1-RA 848 CG12405-RA 97..755 17..675 3160 98.6 Plus
CG12896-RA 848 CG12896-RA 97..755 17..675 3115 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:26:54
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10418950..10419324 100..474 1875 100 Plus
2R 25286936 2R 10424677..10425051 100..474 1800 98.7 Plus
2R 25286936 2R 10427300..10427674 474..100 1800 98.7 Minus
2R 25286936 2R 10419527..10419655 551..679 645 100 Plus
2R 25286936 2R 10425254..10425378 551..675 580 97.6 Plus
2R 25286936 2R 10426973..10427097 675..551 535 95.2 Minus
2R 25286936 2R 10418805..10418887 17..99 415 100 Plus
2R 25286936 2R 10424532..10424614 17..99 415 100 Plus
2R 25286936 2R 10427737..10427819 99..17 415 100 Minus
2R 25286936 2R 10419388..10419463 475..550 380 100 Plus
2R 25286936 2R 10425115..10425190 475..550 365 98.7 Plus
2R 25286936 2R 10427161..10427236 550..475 365 98.7 Minus
Blast to na_te.dros performed on 2015-02-13 16:26:55 has no hits.

BS14132.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:48:09 Download gff for BS14132.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11765-PA 1..663 17..679 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:51:43 Download gff for BS14132.5prime
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 81..750 9..679 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 19:00:18 Download gff for BS14132.5prime
Subject Subject Range Query Range Percent Splice Strand
Prx2540-2-RA 81..750 9..679 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 19:00:18 Download gff for BS14132.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10418798..10418887 9..99 96 -> Plus
2R 10418950..10419324 100..474 100 -> Plus
2R 10419388..10419463 475..550 100 -> Plus
2R 10419527..10419655 551..679 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:51:43 Download gff for BS14132.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6306303..6306392 9..99 96 -> Plus
arm_2R 6306455..6306829 100..474 100 -> Plus
arm_2R 6306893..6306968 475..550 100 -> Plus
arm_2R 6307032..6307160 551..679 100   Plus

BS14132.pep Sequence

Translation from 16 to 678

> BS14132.pep
MRLGQTVPNFEADTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRI
AVHQPEFAKRNTKCLAHSVDALNSHVDWVNDIKSYCLDIPGDFPYPIIAD
PTRDLAVSLGMLDEEQKKDPEVGKTIRALFIISPDHKVRLSMFYPMSTGR
NVDEILRTIDSLQLTDRLKVVATPANWTPGTKVMILPTVTDEEAHKLFPK
GFDKVSMPSGVNYVRTTDNY*

BS14132.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
Prx2540-2-PA 220 CG11765-PA 1..220 1..220 1177 100 Plus
Prx2540-1-PA 220 CG12405-PA 1..220 1..220 1170 99.1 Plus
CG12896-PA 220 CG12896-PA 1..220 1..220 1163 98.2 Plus
Prx6005-PA 222 CG3083-PA 6..219 1..217 571 51.2 Plus
Jafrac1-PE 194 CG1633-PE 24..188 19..192 231 34.9 Plus