BS14138.complete Sequence
413 bp assembled on 2010-02-09
GenBank Submission: KX802380
> BS14138.complete
GAAGTTATCAGTCGACATGAACGTAGTAAAATCTTTGTGTATTTTGGGTC
TGGTTCTCGTCAGCTTGATTGCCACCCAAGCAGCCGATGAGCAGGTGGTA
GGCGGTGTCAGCCAGTTGGAGGGAAACAGCAGGAAGGAGGCTCTGGAACT
TCTGGATGCCACTCTCGCACAGTTGGCCACCGGAGATGGTCCCAGCTACA
AGGCAATCAATGTGACCTCTGTGACGGGTCAGGTCGTAGCTGGAAGTCTT
AACACCTACGAGGTGGAACTTGACAATGGATCCGACAAAAAGCAGTGCAC
CGTGAAGATCTGGACTCAGCCATGGCTCAAGGAGAACGGCACCAACATCA
AGATCAAGTGCTCTGGTGACGATGGCGAACTGGACCGCACCTGGTAGAAG
CTTTCTAGACCAT
BS14138.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:32:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cys-RA | 381 | CG8050-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
| CG8066-RB | 315 | CG8066-PB | 19..315 | 98..397 | 850 | 86.3 | Plus |
| CG8066-RA | 315 | CG8066-PA | 19..315 | 98..397 | 850 | 86.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:32:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cys-RA | 484 | CG8050-RA | 35..420 | 15..400 | 1930 | 100 | Plus |
| CG8066-RB | 703 | CG8066-RB | 81..384 | 98..404 | 870 | 86.3 | Plus |
| CG8066-RA | 1173 | CG8066-RA | 81..384 | 98..404 | 870 | 86.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:32:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14569167..14569365 | 400..202 | 995 | 100 | Minus |
| 3R | 32079331 | 3R | 14569423..14569610 | 202..15 | 940 | 100 | Minus |
| 3R | 32079331 | 3R | 14568400..14568599 | 404..202 | 560 | 86.2 | Minus |
| 3R | 32079331 | 3R | 14568663..14568767 | 202..98 | 315 | 86.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:32:52 has no hits.
BS14138.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:12:10 Download gff for
BS14138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cys-RA | 34..414 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:34 Download gff for
BS14138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cys-RA | 37..417 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:58:55 Download gff for
BS14138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cys-RA | 34..414 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:31:21 Download gff for
BS14138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cys-RA | 37..417 | 17..397 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:31:21 Download gff for
BS14138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14569170..14569365 | 202..397 | 100 | <- | Minus |
| 3R | 14569424..14569608 | 17..201 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:34 Download gff for
BS14138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10394892..10395087 | 202..397 | 100 | <- | Minus |
| arm_3R | 10395146..10395330 | 17..201 | 100 | | Minus |
BS14138.pep Sequence
Translation from 16 to 396
> BS14138.pep
MNVVKSLCILGLVLVSLIATQAADEQVVGGVSQLEGNSRKEALELLDATL
AQLATGDGPSYKAINVTSVTGQVVAGSLNTYEVELDNGSDKKQCTVKIWT
QPWLKENGTNIKIKCSGDDGELDRTW*
BS14138.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cys-PA | 126 | CG8050-PA | 1..126 | 1..126 | 643 | 100 | Plus |
| CG8066-PB | 104 | CG8066-PB | 6..104 | 27..126 | 414 | 81 | Plus |
| CG8066-PA | 104 | CG8066-PA | 6..104 | 27..126 | 414 | 81 | Plus |
| CG31313-PB | 124 | CG31313-PB | 1..124 | 4..126 | 284 | 44.8 | Plus |
| CG31313-PA | 124 | CG31313-PA | 1..124 | 4..126 | 284 | 44.8 | Plus |
