Clone Sequence Records
BS14156.5prime Sequence
507 bp (507 high quality bases) assembled on 2006-10-13
> BS14156.5prime
GAAGTTATCAGTCGACATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGC
GCCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTAT
GCGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAG
CGATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCA
AGGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTAC
GTAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCG
CGAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATG
TCAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAG
GAACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGG
CGTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGTAGAAGCTTT
CTAGACC
BS14156.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-PA | 477 | CG30373-RA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:13:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-RB | 720 | CG30373-RB | 179..655 | 17..493 | 2385 | 100 | Plus |
CG30373-RA | 610 | CG30373-RA | 69..545 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:13:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8164065..8164507 | 493..51 | 2215 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:13:36 has no hits.
BS14156.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:48:29 Download gff for
BS14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-PA | 1..477 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:04:07 Download gff for
BS14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 57..545 | 5..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:27:57 Download gff for
BS14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 57..545 | 5..493 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:27:57 Download gff for
BS14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8164065..8164506 | 52..493 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:04:07 Download gff for
BS14156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4051570..4052011 | 52..493 | 100 | <- | Minus |
BS14156.complete Sequence
509 bp assembled on 2006-11-01
GenBank Submission: FJ637609
> BS14156.complete
GAAGTTATCAGTCGACATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGC
GCCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTAT
GCGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAG
CGATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCA
AGGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTAC
GTAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCG
CGAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATG
TCAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAG
GAACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGG
CGTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGTAGAAGCTTT
CTAGACCAT
BS14156.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:19:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-RB | 477 | CG30373-PB | 1..477 | 17..493 | 2385 | 100 | Plus |
CG30373-RA | 477 | CG30373-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-RB | 720 | CG30373-RB | 179..655 | 17..493 | 2385 | 100 | Plus |
CG30373-RA | 610 | CG30373-RA | 69..545 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8164065..8164507 | 493..51 | 2215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:19:26 has no hits.
BS14156.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:55 Download gff for
BS14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 1..477 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:36 Download gff for
BS14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 53..541 | 5..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:23 Download gff for
BS14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 69..545 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:56 Download gff for
BS14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 53..541 | 5..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:58 Download gff for
BS14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 69..545 | 17..493 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:58 Download gff for
BS14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8164065..8164506 | 52..493 | 100 | <- | Minus |
2R | 8164568..8164602 | 17..51 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:23 Download gff for
BS14156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4051570..4052011 | 52..493 | 100 | <- | Minus |
arm_2R | 4052073..4052107 | 17..51 | 100 | | Minus |
BS14156.pep Sequence
Translation from 16 to 492
> BS14156.pep
MLRLLTKTRVLRQLMPATGATPPASRFYAKNQGAASQKSDDDMVSDEPIK
FFGSQAATWRAKDTRSGGSDETLWYQPYVISASLAIFLLYFCALREESDI
DLRLEGNLYEHVSGLEEVQLTVNYRYNKEHGLDTKEQERRLRELGVDLGQ
LDAKLAAQ*
BS14156.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-PB | 158 | CG30373-PB | 1..158 | 1..158 | 808 | 100 | Plus |
CG30373-PA | 158 | CG30373-PA | 1..158 | 1..158 | 808 | 100 | Plus |