Clone BS14156 Report

Search the DGRC for BS14156

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:141
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG30373-RA
Protein status:BS14156.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14156.5prime Sequence

507 bp (507 high quality bases) assembled on 2006-10-13

> BS14156.5prime
GAAGTTATCAGTCGACATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGC
GCCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTAT
GCGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAG
CGATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCA
AGGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTAC
GTAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCG
CGAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATG
TCAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAG
GAACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGG
CGTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGTAGAAGCTTT
CTAGACC

BS14156.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-PA 477 CG30373-RA 1..477 17..493 2385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:13:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-RB 720 CG30373-RB 179..655 17..493 2385 100 Plus
CG30373-RA 610 CG30373-RA 69..545 17..493 2385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:13:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8164065..8164507 493..51 2215 100 Minus
Blast to na_te.dros performed on 2015-02-11 09:13:36 has no hits.

BS14156.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:48:29 Download gff for BS14156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-PA 1..477 17..493 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:04:07 Download gff for BS14156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 57..545 5..493 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:27:57 Download gff for BS14156.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 57..545 5..493 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:27:57 Download gff for BS14156.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8164065..8164506 52..493 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:04:07 Download gff for BS14156.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4051570..4052011 52..493 100 <- Minus

BS14156.complete Sequence

509 bp assembled on 2006-11-01

GenBank Submission: FJ637609

> BS14156.complete
GAAGTTATCAGTCGACATGCTGCGTTTGCTTACAAAAACAAGGGTGCTGC
GCCAACTGATGCCAGCGACAGGCGCCACTCCACCTGCATCCCGCTTCTAT
GCGAAGAACCAAGGAGCAGCCAGCCAAAAATCGGATGACGACATGGTCAG
CGATGAGCCCATCAAGTTTTTCGGCAGCCAGGCGGCCACTTGGCGCGCCA
AGGACACCCGCAGTGGTGGCAGCGACGAGACCCTTTGGTACCAACCCTAC
GTAATCTCCGCCAGCCTGGCCATCTTCCTCCTGTACTTCTGTGCGCTGCG
CGAGGAGAGCGACATCGATCTCCGGTTGGAGGGCAACTTGTACGAGCATG
TCAGTGGTCTGGAGGAGGTGCAGCTGACTGTCAACTACAGGTACAACAAG
GAACACGGACTGGACACCAAGGAGCAGGAGAGACGGCTCAGGGAACTGGG
CGTTGATCTGGGCCAGTTGGATGCCAAGTTGGCCGCCCAGTAGAAGCTTT
CTAGACCAT

BS14156.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-RB 477 CG30373-PB 1..477 17..493 2385 100 Plus
CG30373-RA 477 CG30373-PA 1..477 17..493 2385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-RB 720 CG30373-RB 179..655 17..493 2385 100 Plus
CG30373-RA 610 CG30373-RA 69..545 17..493 2385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8164065..8164507 493..51 2215 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:19:26 has no hits.

BS14156.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:55 Download gff for BS14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 1..477 17..493 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:36 Download gff for BS14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 53..541 5..493 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:23 Download gff for BS14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 69..545 17..493 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:56 Download gff for BS14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 53..541 5..493 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:58 Download gff for BS14156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 69..545 17..493 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:58 Download gff for BS14156.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8164065..8164506 52..493 100 <- Minus
2R 8164568..8164602 17..51 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:23 Download gff for BS14156.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4051570..4052011 52..493 100 <- Minus
arm_2R 4052073..4052107 17..51 100   Minus

BS14156.pep Sequence

Translation from 16 to 492

> BS14156.pep
MLRLLTKTRVLRQLMPATGATPPASRFYAKNQGAASQKSDDDMVSDEPIK
FFGSQAATWRAKDTRSGGSDETLWYQPYVISASLAIFLLYFCALREESDI
DLRLEGNLYEHVSGLEEVQLTVNYRYNKEHGLDTKEQERRLRELGVDLGQ
LDAKLAAQ*

BS14156.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-PB 158 CG30373-PB 1..158 1..158 808 100 Plus
CG30373-PA 158 CG30373-PA 1..158 1..158 808 100 Plus