Clone BS14189 Report

Search the DGRC for BS14189

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:141
Well:89
Vector:pDNR-Dual
Associated Gene/TranscriptCpr65Av-RA
Protein status:BS14189.pep: full length peptide match
Sequenced Size:368

Clone Sequence Records

BS14189.complete Sequence

368 bp assembled on 2010-02-09

GenBank Submission: KX801665

> BS14189.complete
GAAGTTATCAGTCGACATGCAGTCCTCCAGCATCTGTGTCCTGGCCATTT
GCGCCTTCGCTCTGCTCTCCACCATTAGGGCTGCTCCTCTGGACGACTCC
CAACATGCCACCATACTAAGATACGACAACGACAACATTGGCACTGATGG
CTACAACTTCGGCTACGAGACCAGTGATGGAGTTACCCGCCAGGAGCAGG
CTGAGGTGAAGAACGCCGGTACCGACCAGGAGGCGCTCAGTGTGCGCGGT
TCCGTCAGCTGGGTTGCTCCCGATGGCCAGACCTACACCCTGCACTACAT
TGCGGATGAGAACGGTTTCCAGCCCCAGGGCGATCATCTGCCCCACAACT
AAAAGCTTTCTAGACCAT

BS14189.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:20:52
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr65Av-RA 336 CG32405-PA 1..336 17..352 1680 100 Plus
Cpr65Ax1-RA 309 CG34270-PA 142..291 194..343 225 76.7 Plus
Cpr65Ax2-RB 309 CG18777-PB 142..291 194..343 225 76.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:20:53
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr65Av-RA 642 CG32405-RA 112..449 15..352 1690 100 Plus
Cpr65Ax1-RA 389 CG34270-RA 190..339 194..343 225 76.7 Plus
Cpr65Ax2-RB 732 CG18777-RB 189..338 194..343 225 76.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:20:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6139416..6139610 352..158 960 99.5 Minus
3L 28110227 3L 6139716..6139863 162..15 740 100 Minus
3L 28110227 3L 6150452..6150601 343..194 225 76.7 Minus
3L 28110227 3L 6147581..6147730 343..194 225 76.7 Minus
3L 28110227 3L 6145138..6145289 192..343 205 75.7 Plus
3L 28110227 3L 6152287..6152379 343..251 195 80.6 Minus
3L 28110227 3L 6133172..6133243 343..272 180 83.3 Minus
3L 28110227 3L 6134853..6134924 343..272 180 83.3 Minus
2R 25286936 2R 12404317..12404355 305..343 180 97.4 Plus
Blast to na_te.dros performed on 2014-11-28 04:20:51 has no hits.

BS14189.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:10 Download gff for BS14189.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 1..336 17..352 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:15 Download gff for BS14189.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 113..446 17..350 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:16 Download gff for BS14189.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 114..447 17..350 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:44:55 Download gff for BS14189.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 113..446 17..350 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:14 Download gff for BS14189.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 114..447 17..350 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:14 Download gff for BS14189.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6139418..6139605 163..350 100 <- Minus
3L 6139716..6139861 17..162 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:16 Download gff for BS14189.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6132518..6132705 163..350 100 <- Minus
arm_3L 6132816..6132961 17..162 100   Minus

BS14189.5prime Sequence

366 bp (366 high quality bases) assembled on 2006-10-13

> BS14189.5prime
GAAGTTATCAGTCGACATGCAGTCCTCCAGCATCTGTGTCCTGGCCATTT
GCGCCTTCGCTCTGCTCTCCACCATTAGGGCTGCTCCTCTGGACGACTCC
CAACATGCCACCATACTAAGATACGACAACGACAACATTGGCACTGATGG
CTACAACTTCGGCTACGAGACCAGTGATGGAGTTACCCGCCAGGAGCAGG
CTGAGGTGAAGAACGCCGGTACCGACCAGGAGGCGCTCAGTGTGCGCGGT
TCCGTCAGCTGGGTTGCTCCCGATGGCCAGACCTACACCCTGCACTACAT
TGCGGATGAGAACGGTTTCCAGCCCCAGGGCGATCATCTGCCCCACAACT
AAAAGCTTTCTAGACC

BS14189.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:47:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32405-PA 336 CG32405-RA 1..336 17..352 1680 100 Plus
CG8505-PA 405 CG8505-RA 289..327 305..343 170 97.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr65Av-RA 642 CG32405-RA 112..449 15..352 1690 100 Plus
Cpr65Ax1-RA 389 CG34270-RA 190..339 194..343 225 77.5 Plus
Cpr65Ax2-RB 732 CG18777-RB 189..338 194..343 225 77.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6139416..6139610 352..158 960 99.5 Minus
3L 28110227 3L 6139716..6139863 162..15 740 100 Minus
3L 28110227 3L 6147581..6147730 343..194 225 76.7 Minus
3L 28110227 3L 6150452..6150601 343..194 225 76.7 Minus
3L 28110227 3L 6145138..6145289 192..343 205 75.7 Plus
3L 28110227 3L 6152287..6152379 343..251 195 80.6 Minus
3L 28110227 3L 6133172..6133243 343..272 180 83.3 Minus
3L 28110227 3L 6134853..6134924 343..272 180 83.3 Minus
2R 25286936 2R 12404317..12404355 305..343 180 97.4 Plus
Blast to na_te.dros performed on 2015-02-10 15:20:16 has no hits.

BS14189.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:48:54 Download gff for BS14189.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32405-PA 1..336 17..352 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:38:36 Download gff for BS14189.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 112..456 15..360 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:12:28 Download gff for BS14189.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 112..456 15..360 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:12:28 Download gff for BS14189.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6139409..6139605 163..360 97 <- Minus
3L 6139716..6139863 15..162 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:38:36 Download gff for BS14189.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6132509..6132705 163..360 97 <- Minus
arm_3L 6132816..6132963 15..162 100   Minus

BS14189.3prime Sequence

366 bp (366 high quality bases) assembled on 2006-10-13

> BS14189.3prime
ATGGTCTAGAAAGCTTTTAGTTGTGGGGCAGATGATCGCCCTGGGGCTGG
AAACCGTTCTCATCCGCAATGTAGTGCAGGGTGTAGGTCTGGCCATCGGG
AGCAACCCAGCTGACGGAACCGCGCACACTGAGCGCCTCCTGGTCGGTAC
CGGCGTTCTTCACCTCAGCCTGCTCCTGGCGGGTAACTCCATCACTGGTC
TCGTAGCCGAAGTTGTAGCCATCAGTGCCAATGTTGTCGTTGTCGTATCT
TAGTATGGTGGCATGTTGGGAGTCGTCCAGAGGAGCAGCCCTAATGGTGG
AGAGCAGAGCGAAGGCGCAAATGGCCAGGACACAGATGCTGGAGGACTGC
ATGTCGACTGATAACT

BS14189.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:47:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32405-PA 336 CG32405-RA 1..336 352..17 1680 100 Minus
CG8505-PA 405 CG8505-RA 289..327 64..26 170 97.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:30:29
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr65Av-RA 642 CG32405-RA 112..449 354..17 1690 100 Minus
Cpr65Ax1-RA 389 CG34270-RA 190..339 175..26 225 77.5 Minus
Cpr65Ax2-RB 732 CG18777-RB 189..338 175..26 225 77.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:30:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6139416..6139610 17..211 960 99.5 Plus
3L 28110227 3L 6139716..6139863 207..354 740 100 Plus
3L 28110227 3L 6147581..6147730 26..175 225 76.7 Plus
3L 28110227 3L 6150452..6150601 26..175 225 76.7 Plus
3L 28110227 3L 6145138..6145289 177..26 205 75.7 Minus
3L 28110227 3L 6152287..6152379 26..118 195 80.6 Plus
3L 28110227 3L 6133172..6133243 26..97 180 83.3 Plus
3L 28110227 3L 6134853..6134924 26..97 180 83.3 Plus
2R 25286936 2R 12404317..12404355 64..26 180 97.4 Minus
Blast to na_te.dros performed on 2015-02-13 07:30:27 has no hits.

BS14189.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:48:53 Download gff for BS14189.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32405-PA 1..336 17..352 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:44:57 Download gff for BS14189.3prime
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 112..456 9..354 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:54:46 Download gff for BS14189.3prime
Subject Subject Range Query Range Percent Splice Strand
Cpr65Av-RA 112..456 9..354 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:54:46 Download gff for BS14189.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6139409..6139605 9..206 97 <- Plus
3L 6139716..6139863 207..354 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:44:57 Download gff for BS14189.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6132509..6132705 9..206 97 <- Plus
arm_3L 6132816..6132963 207..354 100   Plus

BS14189.pep Sequence

Translation from 16 to 351

> BS14189.pep
MQSSSICVLAICAFALLSTIRAAPLDDSQHATILRYDNDNIGTDGYNFGY
ETSDGVTRQEQAEVKNAGTDQEALSVRGSVSWVAPDGQTYTLHYIADENG
FQPQGDHLPHN*

BS14189.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr65Av-PA 111 CG32405-PA 1..111 1..111 587 100 Plus
Acp65Aa-PA 105 CG10297-PA 5..104 8..109 293 52.4 Plus
Lcp65Ac-PA 109 CG6956-PA 3..104 7..110 289 55.8 Plus
Cpr65Aw-PA 117 CG32404-PA 11..104 16..109 287 54.3 Plus
Cpr65Ax1-PA 102 CG34270-PA 4..97 10..109 268 54 Plus