Clone Sequence Records
BS14203.3prime Sequence
567 bp (567 high quality bases) assembled on 2006-10-13
> BS14203.3prime
ATGGTCTAGAAAGCTTTCACGCCCCACGATTTTTCACAAAGCCGTAGATG
AGTCGAAATGTCAGGTTGCAGGAGAATGCCCAGGCGGGCACCGAAATGGC
ATTGGCCACGCCAGTAGGAAAACTAAGAAGTCCTGTGAACGGAGCCAGGC
TGATCGCTTCATCGATGATCATGACGGGCGTTCCACGATTCCGGATGCTG
ATAAACACGGTTATTGCTGAGAGCAGCACCTTAGATCCGTAGAACATGGC
CGTATCGATGCTTATCCGCATGAAGTTCTCCATTCCCCGGGCAGATTTCA
GTTTCGCCTCCGCCTCTGATACTTTACGCTCGGCGCGCATAATTTTGATG
GTCCTGGCGTACTCTCCGGAATGCTCCGCATTGCTGACCACCTCCACTTG
CTTCCGGGCATCGTCCAGTTCTGTCTGCAACTGCCGAATTTCCGCGGAGT
TCCTTACGCCCCACAACCGCGACACTTTGAGGTAGTTCCTTATGAAATCT
GGCAGGATTGTGTTCAGCAGGCTGAGCAGGGCGATGAGGGCAAACAGTGT
CATGTCGACTGATAACT
BS14203.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32022-PA | 537 | CG32022-RA | 1..537 | 553..17 | 2685 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:46:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32022-RB | 938 | CG32022-RB | 240..777 | 554..17 | 2690 | 100 | Minus |
CG32022-RA | 792 | CG32022-RA | 94..631 | 554..17 | 2690 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:46:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8720441..8720905 | 17..481 | 2325 | 100 | Plus |
3L | 28110227 | 3L | 8720961..8721033 | 482..554 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 03:46:31 has no hits.
BS14203.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:48:59 Download gff for
BS14203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-PA | 1..537 | 17..553 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:29:28 Download gff for
BS14203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 88..631 | 17..561 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:49:48 Download gff for
BS14203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 88..631 | 17..561 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:49:48 Download gff for
BS14203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8720441..8720905 | 17..481 | 100 | <- | Plus |
3L | 8720961..8721039 | 482..561 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:29:28 Download gff for
BS14203.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8713541..8714005 | 17..481 | 100 | <- | Plus |
arm_3L | 8714061..8714139 | 482..561 | 95 | | Plus |
BS14203.5prime Sequence
567 bp (567 high quality bases) assembled on 2006-10-13
> BS14203.5prime
GAAGTTATCAGTCGACATGACACTGTTTGCCCTCATCGCCCTGCTCAGCC
TGCTGAACACAATCCTGCCAGATTTCATAAGGAACTACCTCAAAGTGTCG
CGGTTGTGGGGCGTAAGGAACTCCGCGGAAATTCGGCAGTTGCAGACAGA
ACTGGACGATGCCCGGAAGCAAGTGGAGGTGGTCAGCAATGCGGAGCATT
CCGGAGAGTACGCCAGGACCATCAAAATTATGCGCGCCGAGCGTAAAGTA
TCAGAGGCGGAGGCGAAACTGAAATCTGCCCGGGGAATGGAGAACTTCAT
GCGGATAAGCATCGATACGGCCATGTTCTACGGATCTAAGGTGCTGCTCT
CAGCAATAACCGTGTTTATCAGCATCCGGAATCGTGGAACGCCCGTCATG
ATCATCGATGAAGCGATCAGCCTGGCTCCGTTCACAGGACTTCTTAGTTT
TCCTACTGGCGTGGCCAATGCCATTTCGGTGCCCGCCTGGGCATTCTCCT
GCAACCTGACATTTCGACTCATCTACGGCTTTGTGAAAAATCGTGGGGCG
TGAAAGCTTTCTAGACC
BS14203.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32022-PA | 537 | CG32022-RA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:10:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32022-RB | 938 | CG32022-RB | 240..777 | 16..553 | 2690 | 100 | Plus |
CG32022-RA | 792 | CG32022-RA | 94..631 | 16..553 | 2690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:10:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8720441..8720905 | 553..89 | 2325 | 100 | Minus |
3L | 28110227 | 3L | 8720961..8721033 | 88..16 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:10:20 has no hits.
BS14203.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:48:59 Download gff for
BS14203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-PA | 1..537 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:39:52 Download gff for
BS14203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 88..631 | 9..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:55:04 Download gff for
BS14203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 88..631 | 9..553 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:55:04 Download gff for
BS14203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8720441..8720905 | 89..553 | 100 | <- | Minus |
3L | 8720961..8721039 | 9..88 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:39:52 Download gff for
BS14203.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8713541..8714005 | 89..553 | 100 | <- | Minus |
arm_3L | 8714061..8714139 | 9..88 | 95 | | Minus |
BS14203.complete Sequence
569 bp assembled on 2006-11-01
GenBank Submission: FJ637613
> BS14203.complete
GAAGTTATCAGTCGACATGACACTGTTTGCCCTCATCGCCCTGCTCAGCC
TGCTGAACACAATCCTGCCAGATTTCATAAGGAACTACCTCAAAGTGTCG
CGGTTGTGGGGCGTAAGGAACTCCGCGGAAATTCGGCAGTTGCAGACAGA
ACTGGACGATGCCCGGAAGCAAGTGGAGGTGGTCAGCAATGCGGAGCATT
CCGGAGAGTACGCCAGGACCATCAAAATTATGCGCGCCGAGCGTAAAGTA
TCAGAGGCGGAGGCGAAACTGAAATCTGCCCGGGGAATGGAGAACTTCAT
GCGGATAAGCATCGATACGGCCATGTTCTACGGATCTAAGGTGCTGCTCT
CAGCAATAACCGTGTTTATCAGCATCCGGAATCGTGGAACGCCCGTCATG
ATCATCGATGAAGCGATCAGCCTGGCTCCGTTCACAGGACTTCTTAGTTT
TCCTACTGGCGTGGCCAATGCCATTTCGGTGCCCGCCTGGGCATTCTCCT
GCAACCTGACATTTCGACTCATCTACGGCTTTGTGAAAAATCGTGGGGCG
TGAAAGCTTTCTAGACCAT
BS14203.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:51:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32022-RB | 537 | CG32022-PB | 1..537 | 17..553 | 2685 | 100 | Plus |
CG32022-RA | 537 | CG32022-PA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:51:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32022-RB | 938 | CG32022-RB | 240..777 | 16..553 | 2690 | 100 | Plus |
CG32022-RA | 792 | CG32022-RA | 94..631 | 16..553 | 2690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:51:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8720441..8720905 | 553..89 | 2325 | 100 | Minus |
3L | 28110227 | 3L | 8720961..8721033 | 88..16 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:51:08 has no hits.
BS14203.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:41 Download gff for
BS14203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 1..537 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:10:56 Download gff for
BS14203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 234..777 | 9..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:37 Download gff for
BS14203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 95..630 | 17..552 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:41 Download gff for
BS14203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 234..777 | 9..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:57:19 Download gff for
BS14203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32022-RA | 95..630 | 17..552 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:19 Download gff for
BS14203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8720442..8720905 | 89..552 | 100 | <- | Minus |
3L | 8720961..8721032 | 17..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:37 Download gff for
BS14203.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8713542..8714005 | 89..552 | 100 | <- | Minus |
arm_3L | 8714061..8714132 | 17..88 | 100 | | Minus |
BS14203.pep Sequence
Translation from 16 to 552
> BS14203.pep
MTLFALIALLSLLNTILPDFIRNYLKVSRLWGVRNSAEIRQLQTELDDAR
KQVEVVSNAEHSGEYARTIKIMRAERKVSEAEAKLKSARGMENFMRISID
TAMFYGSKVLLSAITVFISIRNRGTPVMIIDEAISLAPFTGLLSFPTGVA
NAISVPAWAFSCNLTFRLIYGFVKNRGA*
BS14203.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32022-PB | 178 | CG32022-PB | 1..178 | 1..178 | 879 | 100 | Plus |
CG32022-PA | 178 | CG32022-PA | 1..178 | 1..178 | 879 | 100 | Plus |