Clone Sequence Records
BS14213.complete Sequence
1490 bp assembled on 2009-12-07
GenBank Submission: KX801744
> BS14213.complete
GAAGTTATCAGTCGACATGGAGGATTTGCATTTAAAACTCGGCGATCTGC
CCCAGGAAGTATTGGCTGCACGGCACAGCATGATTATGGGCCAAAAGTTG
GCTGGATCACTTGGTGAGACACAGCATCACCTTCAGCATCAACATCACCT
GAATCACCAACTGAACCAGCTCAATCAGTTGAGCCACTTGAATCAGTTCC
ATCAGTTAAACCAATTGAATCAATTGAGTCAGCTACACCAGCATATACAA
CATAAGATCTCTTCGGGGATGAACCTAAATTTGGATCTGGACCATAAGAT
GGAGACGGAGATGGAGTTGGGTCTGGGCCTTGATGTGGATGTGAATCTGG
GAGTTAATCTGGACATGAATCCGGAGGGCAGTATTACCAATAGTACCAGC
CGTACCAGCAGTGCTAGCAGGACCAGCAGCACCAACACGTGCAGCGATCA
GGGGCAAGGACATGGATCTGGGATTGGACTTGGTGACCCAAAGCGGGACC
AAAGCCAAGTCCACTACGCCCATGACCCTGCCCAGGATAATGGCGATTCA
CCGAATGTCAAGAGTTGTACTGGAATGTGCAGCCATCAAACAGAGAGCAA
TATGAATAAGGGGGATTCCCTAACGCATACCAAGTCTTCATCGCCGAAGA
CGGACAAGGGGGAGAAGGATAAGGAGGAGCTTAAAGCGAAGGAGGAGGAG
GAGGAGGAGTTTAAAGAGGATACGGAGGATAAGAAGGATAACGAGGACGT
TTTCCAGAAACAGGAACCGTCTTCTTCCATGTTGATTAAGGCGGCCAACT
CCAAGCTAAATGTCAATGCCACTGTTTACACGATGCCAGCCAAAGTAGAA
CCCCTTCATGACGGATCATTCGTGCCCCAACCGAGTTCCAGTGCCACCTC
ACAGGGCACTGGGGACTATCGCCTCAATGCCCAGGCTGCTGTATTCAAGC
CATCTTTGATGTGCATTTGCTCGTTGGCTTCGCCGGTGGTTTTGCAACGA
CTACGTCCGATTGTAGTACGGCCACCACTACCGGGGGTATCGCAACACCT
GATGTCGGACATTTCACAGCCTCTACTGCCGAACTCGCCACTGATGAGCC
ACGAGTTCTTAGCCCATGGTTTTCATCCAATGCAAAGGTCGGGCCATAAA
CCAAGTGGCCGCTGGCGCAAACAACCGCTTCCGGACTTGTTCAGCGCCGT
CATGTCACTGGTGACGGAACTGAAGCGATCGGTGAGCTATCCGGAGATCA
TAAGCTGCCTATCCAAGAGACTCCATCGAGCGGAGGTGGAACTGAAGCGC
CATGTACCGCACACATTGCACGCCGCCGTTAACAATGGCTATTTGAAGAA
GGAGGGCAATCGCTATTCCCTGCTCCCCGAAGTGGAACAGGCTGAGATCA
TGCGACGCAACATCGCGGATGCTCTTCGGGCCAAGGAGCTGGAGAAGGAG
CCGTTGTCCTGGCGCAGGCGTTAAAAGCTTTCTAGACCAT
BS14213.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15572-RA | 1458 | CG15572-PA | 1..1458 | 17..1474 | 7290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15572-RA | 2383 | CG15572-RA | 331..1788 | 17..1474 | 7290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4269031..4270488 | 17..1474 | 7290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:24:08 has no hits.
BS14213.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:20 Download gff for
BS14213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-RA | 331..1786 | 17..1472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:20 Download gff for
BS14213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-RA | 331..1786 | 17..1472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:07:05 Download gff for
BS14213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-RA | 331..1786 | 17..1472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:37 Download gff for
BS14213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-RA | 331..1786 | 17..1472 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:37 Download gff for
BS14213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4269031..4270486 | 17..1472 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:20 Download gff for
BS14213.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4163064..4164519 | 17..1472 | 100 | | Plus |
BS14213.3prime Sequence
639 bp (475 high quality bases) assembled on 2006-10-13
> BS14213.3prime
ATGGTCTAGAAAGCTTTTAACGCCTGCGCCAGGACAACGGCTCCTTCTCC
AGCTCCTTGGCCCGAAGAGCATCCGCGATGTTGCGTCGCATGATCTCAGC
CTGTTCCACTTCGGGGAGCAGGGAATAGCGATTGCCCTCCTTCTTCAAAT
AGCCATTGTTAACGGCGGCGTGCAATGTGTGCGGTACATGGCGCTTCAGT
TCCACCTCCGCTCGATGGAGTCTCTTGGATAGGCAGCTTATGATCTCCGG
ATAGCTCACCGATCGCTTCAGTTCCGTCACCAGTGACATGACGGCGCTGA
ACAAGTCCGGAAGCGGTTGTTTGCGCCAGCGGCCACTTGGTTTATGGCCC
GACCTTTGCATTGGATGAAAACCATGGGCTAAGAACTCGTGGCTCATCAG
TGGCGAGTTCGGCAGTAGAGGCTGTGAAATGTCCGACATCAGGTGTTGCG
ATACCCCCGGTAGTGGTGGCCGTACTACAATCGGACGTAGTCGTTGCAAA
ACCACCGGCGAAGCCAACGAGCAAATGCACATCAAAGATGGCTTGAATAC
AGCAGCCTGGGCATTGAGGCGATAGTCCCCAGTGCCCTGTGAGGTGGCAC
TGGAACTCGGTTGGGGCACAAATGATCCGGCCTGAAGGG
BS14213.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:49:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15572-PA | 1458 | CG15572-RA | 846..1458 | 629..17 | 3040 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15572-RA | 2383 | CG15572-RA | 1166..1788 | 639..17 | 3070 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:27:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4269866..4270488 | 639..17 | 3070 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:27:44 has no hits.
BS14213.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:07 Download gff for
BS14213.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-PA | 836..1458 | 17..639 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:09:07 Download gff for
BS14213.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-RA | 1166..1788 | 17..639 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:13:07 Download gff for
BS14213.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-RA | 1166..1788 | 17..639 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:13:07 Download gff for
BS14213.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4269866..4270488 | 17..639 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:09:07 Download gff for
BS14213.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4163899..4164521 | 17..639 | 99 | | Minus |
BS14213.5prime Sequence
566 bp (491 high quality bases) assembled on 2006-10-13
> BS14213.5prime
GAAGTTATCAGTCGACATGGAGGATTTGCATTTAAAACTCGGCGATCTGC
CCCAGGAAGTATTGGCTGCACGGCACAGCATGATTATGGGCCAAAAGTTG
GCTGGATCACTTGGTGAGACACAGCATCACCTTCAGCATCAACATCACCT
GAATCACCAACTGAACCAGCTCAATCAGTTGAGCCACTTGAATCAGTTCC
ATCAGTTAAACCAATTGAATCAATTGAGTCAGCTACACCAGCATATACAA
CATAAGATCTCTTCGGGGATGAACCTAAATTTGGATCTGGACCATAAGAT
GGAGACGGAGATGGAGTTGGGTCTGGGCCTTGATGTGGATGTGAATCTGG
GAGTTAATCTGGACATGAATCCGGAGGGCAGTATTACCAATAGTACCAGC
CGTACCAGCAGTGCTAGCAGGACCAGCAGCACCAACACGTGCAGCGATCA
GGGGCAAGGACATGGATCTGGGATTGGACTTGGTGACCCAAAGCGGGAAC
AAAGCCAAGTCCACTACGCCCATGACCCTGCCCAGGATAATGGCGATTCA
CCGAATGTCAAGAGTT
BS14213.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15572-PA | 1458 | CG15572-RA | 1..550 | 17..566 | 2725 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:16:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15572-RA | 2383 | CG15572-RA | 331..880 | 17..566 | 2735 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:16:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4269031..4269580 | 17..566 | 2735 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:16:08 has no hits.
BS14213.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:07 Download gff for
BS14213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-PA | 1..550 | 17..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 22:48:10 Download gff for
BS14213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-RA | 327..880 | 10..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:16:16 Download gff for
BS14213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15572-RA | 327..880 | 10..566 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:16:16 Download gff for
BS14213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4269029..4269580 | 11..566 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 22:48:10 Download gff for
BS14213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4163062..4163613 | 11..566 | 99 | | Plus |
BS14213.pep Sequence
Translation from 16 to 1473
> BS14213.pep
MEDLHLKLGDLPQEVLAARHSMIMGQKLAGSLGETQHHLQHQHHLNHQLN
QLNQLSHLNQFHQLNQLNQLSQLHQHIQHKISSGMNLNLDLDHKMETEME
LGLGLDVDVNLGVNLDMNPEGSITNSTSRTSSASRTSSTNTCSDQGQGHG
SGIGLGDPKRDQSQVHYAHDPAQDNGDSPNVKSCTGMCSHQTESNMNKGD
SLTHTKSSSPKTDKGEKDKEELKAKEEEEEEFKEDTEDKKDNEDVFQKQE
PSSSMLIKAANSKLNVNATVYTMPAKVEPLHDGSFVPQPSSSATSQGTGD
YRLNAQAAVFKPSLMCICSLASPVVLQRLRPIVVRPPLPGVSQHLMSDIS
QPLLPNSPLMSHEFLAHGFHPMQRSGHKPSGRWRKQPLPDLFSAVMSLVT
ELKRSVSYPEIISCLSKRLHRAEVELKRHVPHTLHAAVNNGYLKKEGNRY
SLLPEVEQAEIMRRNIADALRAKELEKEPLSWRRR*
BS14213.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:02:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15572-PA | 485 | CG15572-PA | 1..485 | 1..485 | 2534 | 100 | Plus |
